RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
ATPAF1-214ENST00000576409 LARP6Q9BRS8 491 aaKnown RBP21.67■■□□□ 1.06
ATPAF1-214ENST00000576409 CCAR2Q8N163 923 aaKnown RBP21.67■■□□□ 1.06
ATPAF1-214ENST00000576409 DDX54Q8TDD1 881 aaKnown RBP21.67■■□□□ 1.06
ATPAF1-214ENST00000576409 GDPD2Q9HCC8 539 aa21.67■■□□□ 1.06
ATPAF1-214ENST00000576409 UBTFL1P0CB47 393 aaPredicted RBP21.66■■□□□ 1.06
ATPAF1-214ENST00000576409 PARD3Q8TEW0 1356 aa21.66■■□□□ 1.06
ATPAF1-214ENST00000576409 ZNF771Q7L3S4 317 aaPredicted RBP21.66■■□□□ 1.06
ATPAF1-214ENST00000576409 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
ATPAF1-214ENST00000576409 SNAPC4Q5SXM2 1469 aa21.66■■□□□ 1.06
ATPAF1-214ENST00000576409 NPHP1O15259 732 aa21.66■■□□□ 1.06
ATPAF1-214ENST00000576409 CCDC39Q9UFE4 941 aa21.66■■□□□ 1.06
ATPAF1-214ENST00000576409 GPRASP1Q5JY77 1395 aa21.65■■□□□ 1.06
ATPAF1-214ENST00000576409 ERC2O15083 957 aa21.64■■□□□ 1.06
ATPAF1-214ENST00000576409 TSPY26PQ9H489 355 aa21.64■■□□□ 1.06
ATPAF1-214ENST00000576409 TOMM22Q9NS69 142 aa21.64■■□□□ 1.06
ATPAF1-214ENST00000576409 CEBPZQ03701 1054 aaKnown RBP21.64■■□□□ 1.05
ATPAF1-214ENST00000576409 RNF123Q5XPI4 1314 aa21.64■■□□□ 1.05
ATPAF1-214ENST00000576409 ZSCAN30Q86W11 494 aa21.64■■□□□ 1.05
ATPAF1-214ENST00000576409 UQCRHLA0A096LP55 91 aa21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 MBD3O95983 291 aa21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 UQCRHP07919 91 aa21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 TPM2P07951 284 aa21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 CYB5RLQ6IPT4 315 aa21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 RAPGEF3O95398 923 aa21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 RUFY2Q8WXA3 655 aa21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 CIZ1Q9ULV3 898 aaPredicted RBP21.63■■□□□ 1.05
ATPAF1-214ENST00000576409 TBC1D9Q6ZT07 1266 aa21.62■■□□□ 1.05
ATPAF1-214ENST00000576409 MCM10Q7L590 875 aa21.62■■□□□ 1.05
ATPAF1-214ENST00000576409 RBM27Q9P2N5 1060 aaKnown RBP21.62■■□□□ 1.05
ATPAF1-214ENST00000576409 NINLQ9Y2I6 1382 aa21.62■■□□□ 1.05
ATPAF1-214ENST00000576409 PLEKHH2Q8IVE3 1493 aa21.62■■□□□ 1.05
ATPAF1-214ENST00000576409 F6X3S4 739 aa21.62■■□□□ 1.05
ATPAF1-214ENST00000576409 KDM4AO75164 1064 aa21.61■■□□□ 1.05
ATPAF1-214ENST00000576409 TAF7LQ5H9L4 462 aa21.6■■□□□ 1.05
ATPAF1-214ENST00000576409 WAPLQ7Z5K2 1190 aa21.6■■□□□ 1.05
ATPAF1-214ENST00000576409 CC2D2AQ9P2K1 1620 aa21.6■■□□□ 1.05
ATPAF1-214ENST00000576409 RRAGDQ9NQL2 400 aaPredicted RBP21.6■■□□□ 1.05
ATPAF1-214ENST00000576409 IQGAP2Q13576 1575 aa21.6■■□□□ 1.05
ATPAF1-214ENST00000576409 TRIM5Q9C035 493 aa21.6■■□□□ 1.05
ATPAF1-214ENST00000576409 EMILIN1Q9Y6C2 1016 aa21.59■■□□□ 1.05
ATPAF1-214ENST00000576409 KIAA0586Q9BVV6 1533 aa21.59■■□□□ 1.05
ATPAF1-214ENST00000576409 PRDM10Q9NQV6 1147 aa21.59■■□□□ 1.05
ATPAF1-214ENST00000576409 CT47B1P0C2W7 299 aaPredicted RBP21.59■■□□□ 1.05
ATPAF1-214ENST00000576409 NLRP6P59044 892 aa21.59■■□□□ 1.05
ATPAF1-214ENST00000576409 FMNL2Q96PY5 1086 aa21.59■■□□□ 1.05
ATPAF1-214ENST00000576409 FAM83GA6ND36 823 aa21.58■■□□□ 1.05
ATPAF1-214ENST00000576409 PEG3Q9GZU2 1588 aa21.58■■□□□ 1.05
ATPAF1-214ENST00000576409 STK3Q13188 491 aa21.58■■□□□ 1.05
ATPAF1-214ENST00000576409 RRP9O43818 475 aaKnown RBP21.58■■□□□ 1.04
ATPAF1-214ENST00000576409 GNAI2P04899 355 aa21.58■■□□□ 1.04
ATPAF1-214ENST00000576409 A0A0U1RQG5 324 aaPredicted RBP21.58■■□□□ 1.04
ATPAF1-214ENST00000576409 SASS6Q6UVJ0 657 aa21.58■■□□□ 1.04
ATPAF1-214ENST00000576409 FERMT3Q86UX7 667 aa21.58■■□□□ 1.04
ATPAF1-214ENST00000576409 CARD14Q9BXL6 1004 aa21.58■■□□□ 1.04
ATPAF1-214ENST00000576409 G3BP1Q13283 466 aaKnown RBP eCLIP21.57■■□□□ 1.04
ATPAF1-214ENST00000576409 ISY1Q9ULR0 285 aaKnown RBP21.57■■□□□ 1.04
ATPAF1-214ENST00000576409 EID1Q9Y6B2 187 aa21.57■■□□□ 1.04
ATPAF1-214ENST00000576409 FCHSD2O94868 740 aa21.57■■□□□ 1.04
ATPAF1-214ENST00000576409 MAGI1Q96QZ7 1491 aaPredicted RBP21.56■■□□□ 1.04
ATPAF1-214ENST00000576409 TNNT3P45378 269 aaPredicted RBP21.56■■□□□ 1.04
ATPAF1-214ENST00000576409 NFE2L2Q16236 605 aa21.56■■□□□ 1.04
ATPAF1-214ENST00000576409 HDAC5Q9UQL6 1122 aa21.56■■□□□ 1.04
ATPAF1-214ENST00000576409 GPATCH8Q9UKJ3 1502 aaKnown RBP21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 BAG4O95429 457 aaKnown RBP21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 NUTM1Q86Y26 1132 aa21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 GNAI3P08754 354 aa21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 TPM4P67936 248 aa21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 HOMER1Q86YM7 354 aa21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 CWC22Q9HCG8 908 aaKnown RBP21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 UGGT2Q9NYU1 1516 aa21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 CLASRPQ8N2M8 674 aaKnown RBP21.55■■□□□ 1.04
ATPAF1-214ENST00000576409 LRRCC1Q9C099 1032 aa21.54■■□□□ 1.04
ATPAF1-214ENST00000576409 CWC27Q6UX04 472 aaKnown RBP21.54■■□□□ 1.04
ATPAF1-214ENST00000576409 C16orf71Q8IYS4 520 aaPredicted RBP21.54■■□□□ 1.04
ATPAF1-214ENST00000576409 C1orf141Q5JVX7 400 aa21.53■■□□□ 1.04
ATPAF1-214ENST00000576409 CCDC141Q6ZP82 1450 aa21.53■■□□□ 1.04
ATPAF1-214ENST00000576409 KDM2BQ8NHM5 1336 aa21.52■■□□□ 1.04
ATPAF1-214ENST00000576409 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
ATPAF1-214ENST00000576409 SIL1Q9H173 461 aa21.52■■□□□ 1.04
ATPAF1-214ENST00000576409 NME9Q86XW9 330 aa21.52■■□□□ 1.04
ATPAF1-214ENST00000576409 NEUROD6Q96NK8 337 aa21.52■■□□□ 1.04
ATPAF1-214ENST00000576409 CHMP4AQ9BY43 222 aa21.52■■□□□ 1.04
ATPAF1-214ENST00000576409 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.52■■□□□ 1.04
ATPAF1-214ENST00000576409 HDGFL1Q5TGJ6 251 aa21.51■■□□□ 1.03
ATPAF1-214ENST00000576409 FSD1Q9BTV5 496 aa21.51■■□□□ 1.03
ATPAF1-214ENST00000576409 SDF4Q9BRK5 362 aa21.51■■□□□ 1.03
ATPAF1-214ENST00000576409 KIF3AQ9Y496 699 aa21.51■■□□□ 1.03
ATPAF1-214ENST00000576409 RALGAPBQ86X10 1494 aa21.5■■□□□ 1.03
ATPAF1-214ENST00000576409 NEXNQ0ZGT2 675 aa21.5■■□□□ 1.03
ATPAF1-214ENST00000576409 CNTROBQ8N137 903 aa21.5■■□□□ 1.03
ATPAF1-214ENST00000576409 PES1O00541 588 aaKnown RBP21.5■■□□□ 1.03
ATPAF1-214ENST00000576409 RNF20Q5VTR2 975 aa21.5■■□□□ 1.03
ATPAF1-214ENST00000576409 USP25Q9UHP3 1055 aa21.5■■□□□ 1.03
ATPAF1-214ENST00000576409 ZNF608Q9ULD9 1512 aaPredicted RBP21.5■■□□□ 1.03
ATPAF1-214ENST00000576409 TRHP20396 242 aaPredicted RBP21.49■■□□□ 1.03
ATPAF1-214ENST00000576409 GAS2L2Q8NHY3 880 aa21.49■■□□□ 1.03
ATPAF1-214ENST00000576409 ZMYND15Q9H091 742 aa21.49■■□□□ 1.03
ATPAF1-214ENST00000576409 BMP2KLQ5H9B9 411 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms