RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 PLEKHG3A1L390 1219 aa13.22□□□□□ -0.29
NDE1-208ENST00000573694 YTHDC1Q96MU7 727 aaKnown RBP13.22□□□□□ -0.29
NDE1-208ENST00000573694 SLIT2O94813 1529 aa13.22□□□□□ -0.29
NDE1-208ENST00000573694 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
NDE1-208ENST00000573694 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
NDE1-208ENST00000573694 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.21□□□□□ -0.3
NDE1-208ENST00000573694 MARF1Q9Y4F3 1742 aaKnown RBP13.2□□□□□ -0.3
NDE1-208ENST00000573694 HAP1P54257 671 aaPredicted RBP13.2□□□□□ -0.3
NDE1-208ENST00000573694 VPS72Q15906 364 aa13.2□□□□□ -0.3
NDE1-208ENST00000573694 NGDNQ8NEJ9 315 aaKnown RBP13.2□□□□□ -0.3
NDE1-208ENST00000573694 NUDT16Q96DE0 195 aaKnown RBP13.2□□□□□ -0.3
NDE1-208ENST00000573694 POLR3AO14802 1390 aaPredicted RBP13.2□□□□□ -0.3
NDE1-208ENST00000573694 MINK1Q8N4C8 1332 aaPredicted RBP13.19□□□□□ -0.3
NDE1-208ENST00000573694 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
NDE1-208ENST00000573694 TMF1P82094 1093 aa13.18□□□□□ -0.3
NDE1-208ENST00000573694 XPCQ01831 940 aaPredicted RBP13.18□□□□□ -0.3
NDE1-208ENST00000573694 CDK19Q9BWU1 502 aa13.18□□□□□ -0.3
NDE1-208ENST00000573694 RGS12O14924 1447 aa13.18□□□□□ -0.3
NDE1-208ENST00000573694 ATP7BP35670 1465 aa13.17□□□□□ -0.3
NDE1-208ENST00000573694 CENPJQ9HC77 1338 aaPredicted RBP13.17□□□□□ -0.3
NDE1-208ENST00000573694 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
NDE1-208ENST00000573694 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
NDE1-208ENST00000573694 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
NDE1-208ENST00000573694 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
NDE1-208ENST00000573694 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
NDE1-208ENST00000573694 ITSN1Q15811 1721 aa13.16□□□□□ -0.3
NDE1-208ENST00000573694 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
NDE1-208ENST00000573694 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
NDE1-208ENST00000573694 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.31
NDE1-208ENST00000573694 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
NDE1-208ENST00000573694 EVC2Q86UK5 1308 aa13.13□□□□□ -0.31
NDE1-208ENST00000573694 FAM83GA6ND36 823 aa13.13□□□□□ -0.31
NDE1-208ENST00000573694 LMOD2Q6P5Q4 547 aa13.13□□□□□ -0.31
NDE1-208ENST00000573694 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
NDE1-208ENST00000573694 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
NDE1-208ENST00000573694 TRPM3Q9HCF6 1732 aaPredicted RBP13.12□□□□□ -0.31
NDE1-208ENST00000573694 ACEP12821 1306 aa13.12□□□□□ -0.31
NDE1-208ENST00000573694 ALS2Q96Q42 1657 aa13.12□□□□□ -0.31
NDE1-208ENST00000573694 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
NDE1-208ENST00000573694 CPDO75976 1380 aa13.1□□□□□ -0.31
NDE1-208ENST00000573694 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
NDE1-208ENST00000573694 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
NDE1-208ENST00000573694 BLMP54132 1417 aaPredicted RBP13.09□□□□□ -0.31
NDE1-208ENST00000573694 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
NDE1-208ENST00000573694 CCDC184Q52MB2 194 aa13.09□□□□□ -0.31
NDE1-208ENST00000573694 CABLES1Q8TDN4 633 aa13.09□□□□□ -0.31
NDE1-208ENST00000573694 PRDM11Q9NQV5 511 aa13.09□□□□□ -0.31
NDE1-208ENST00000573694 SEPT12Q8IYM1 358 aa13.08□□□□□ -0.32
NDE1-208ENST00000573694 ABTB2Q8N961 1025 aa13.08□□□□□ -0.32
NDE1-208ENST00000573694 BTG4Q9NY30 223 aa13.08□□□□□ -0.32
NDE1-208ENST00000573694 THRAP3Q9Y2W1 955 aaKnown RBP13.08□□□□□ -0.32
NDE1-208ENST00000573694 USP19O94966 1318 aa13.08□□□□□ -0.32
NDE1-208ENST00000573694 SPATA31A5Q5VU36 1347 aa13.08□□□□□ -0.32
NDE1-208ENST00000573694 SPATA31A7Q8IWB4 1347 aa13.08□□□□□ -0.32
NDE1-208ENST00000573694 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
NDE1-208ENST00000573694 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
NDE1-208ENST00000573694 CDCA8Q53HL2 280 aa13.07□□□□□ -0.32
NDE1-208ENST00000573694 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
NDE1-208ENST00000573694 PANK3Q9H999 370 aa13.07□□□□□ -0.32
NDE1-208ENST00000573694 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
NDE1-208ENST00000573694 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
NDE1-208ENST00000573694 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
NDE1-208ENST00000573694 GLI3P10071 1580 aa13.06□□□□□ -0.32
NDE1-208ENST00000573694 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
NDE1-208ENST00000573694 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
NDE1-208ENST00000573694 ABCA3Q99758 1704 aa13.05□□□□□ -0.32
NDE1-208ENST00000573694 PER1O15534 1290 aaPredicted RBP13.05□□□□□ -0.32
NDE1-208ENST00000573694 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
NDE1-208ENST00000573694 CCDC9Q9Y3X0 531 aaKnown RBP13.05□□□□□ -0.32
NDE1-208ENST00000573694 KTN1Q86UP2 1357 aaKnown RBP13.05□□□□□ -0.32
NDE1-208ENST00000573694 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
NDE1-208ENST00000573694 GCP02774 474 aa13.04□□□□□ -0.32
NDE1-208ENST00000573694 PLCH1Q4KWH8 1693 aa13.03□□□□□ -0.32
NDE1-208ENST00000573694 CABP1Q9NZU7 370 aa13.03□□□□□ -0.32
NDE1-208ENST00000573694 USP6P35125 1406 aa13.03□□□□□ -0.32
NDE1-208ENST00000573694 EP400Q96L91 3159 aa13.02□□□□□ -0.32
NDE1-208ENST00000573694 EVA1CP58658 441 aa13.02□□□□□ -0.33
NDE1-208ENST00000573694 CDCA7Q9BWT1 371 aaPredicted RBP13.02□□□□□ -0.33
NDE1-208ENST00000573694 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
NDE1-208ENST00000573694 CABP2Q9NPB3 220 aa13.02□□□□□ -0.33
NDE1-208ENST00000573694 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.33
NDE1-208ENST00000573694 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.33
NDE1-208ENST00000573694 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
NDE1-208ENST00000573694 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.33
NDE1-208ENST00000573694 SSH2Q76I76 1423 aa13.02□□□□□ -0.33
NDE1-208ENST00000573694 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
NDE1-208ENST00000573694 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
NDE1-208ENST00000573694 CRYBG1Q9Y4K1 1723 aa13.01□□□□□ -0.33
NDE1-208ENST00000573694 KIF20BQ96Q89 1820 aa13□□□□□ -0.33
NDE1-208ENST00000573694 ANKRD26Q9UPS8 1709 aa13□□□□□ -0.33
NDE1-208ENST00000573694 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
NDE1-208ENST00000573694 BAG6P46379 1132 aa13□□□□□ -0.33
NDE1-208ENST00000573694 NLRP6P59044 892 aa13□□□□□ -0.33
NDE1-208ENST00000573694 NRAPQ86VF7 1730 aa12.99□□□□□ -0.33
NDE1-208ENST00000573694 CPSF1Q10570 1443 aaKnown RBP12.99□□□□□ -0.33
NDE1-208ENST00000573694 NSD3Q9BZ95 1437 aa12.99□□□□□ -0.33
NDE1-208ENST00000573694 RALBP1Q15311 655 aa12.99□□□□□ -0.33
NDE1-208ENST00000573694 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
NDE1-208ENST00000573694 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
NDE1-208ENST00000573694 DISP2A7MBM2 1401 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms