RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 MVPQ14764 893 aaKnown RBP14.36□□□□□ -0.11
RPAIN-212ENST00000573126 NFKBIBQ15653 356 aa14.36□□□□□ -0.11
RPAIN-212ENST00000573126 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
RPAIN-212ENST00000573126 HDGFL2Q7Z4V5 671 aaPredicted RBP14.36□□□□□ -0.11
RPAIN-212ENST00000573126 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.36□□□□□ -0.11
RPAIN-212ENST00000573126 FAM69CQ0P6D2 419 aa14.36□□□□□ -0.11
RPAIN-212ENST00000573126 ADGRB2O60241 1585 aa14.36□□□□□ -0.11
RPAIN-212ENST00000573126 WAPLQ7Z5K2 1190 aa14.35□□□□□ -0.11
RPAIN-212ENST00000573126 DZIP1LQ8IYY4 767 aaKnown RBP14.35□□□□□ -0.11
RPAIN-212ENST00000573126 PDZRN3Q9UPQ7 1066 aa14.35□□□□□ -0.11
RPAIN-212ENST00000573126 NLRP1Q9C000 1473 aa14.35□□□□□ -0.11
RPAIN-212ENST00000573126 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
RPAIN-212ENST00000573126 RIPK4P57078 832 aa14.35□□□□□ -0.11
RPAIN-212ENST00000573126 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
RPAIN-212ENST00000573126 COL3A1P02461 1466 aaPredicted RBP14.35□□□□□ -0.11
RPAIN-212ENST00000573126 AAMPQ13685 434 aa14.35□□□□□ -0.11
RPAIN-212ENST00000573126 TRIM27P14373 513 aa14.34□□□□□ -0.11
RPAIN-212ENST00000573126 SSH1Q8WYL5 1049 aa14.34□□□□□ -0.11
RPAIN-212ENST00000573126 MLECQ14165 292 aa14.34□□□□□ -0.11
RPAIN-212ENST00000573126 RWDD1Q9H446 243 aaPredicted RBP14.34□□□□□ -0.11
RPAIN-212ENST00000573126 ALKQ9UM73 1620 aa14.33□□□□□ -0.12
RPAIN-212ENST00000573126 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
RPAIN-212ENST00000573126 ARHGEF40Q8TER5 1519 aa14.32□□□□□ -0.12
RPAIN-212ENST00000573126 CT47B1P0C2W7 299 aaPredicted RBP14.31□□□□□ -0.12
RPAIN-212ENST00000573126 NOB1Q9ULX3 412 aaKnown RBP14.31□□□□□ -0.12
RPAIN-212ENST00000573126 MED14O60244 1454 aa14.3□□□□□ -0.12
RPAIN-212ENST00000573126 ATF7IPQ6VMQ6 1270 aa14.3□□□□□ -0.12
RPAIN-212ENST00000573126 PNPLA6Q8IY17 1366 aa14.3□□□□□ -0.12
RPAIN-212ENST00000573126 PRKAR2BP31323 418 aa14.29□□□□□ -0.12
RPAIN-212ENST00000573126 POLKQ9UBT6 870 aa14.29□□□□□ -0.12
RPAIN-212ENST00000573126 FRAT2O75474 233 aaPredicted RBP14.28□□□□□ -0.12
RPAIN-212ENST00000573126 HMOX1P09601 288 aa14.28□□□□□ -0.12
RPAIN-212ENST00000573126 CLTCQ00610 1675 aaKnown RBP14.28□□□□□ -0.12
RPAIN-212ENST00000573126 IL16Q14005 1332 aa14.28□□□□□ -0.12
RPAIN-212ENST00000573126 FCHSD2O94868 740 aa14.28□□□□□ -0.12
RPAIN-212ENST00000573126 TMEM57Q8N5G2 664 aa14.28□□□□□ -0.12
RPAIN-212ENST00000573126 THUMPD2Q9BTF0 503 aaKnown RBP14.27□□□□□ -0.12
RPAIN-212ENST00000573126 DDX19BQ9UMR2 479 aa14.27□□□□□ -0.12
RPAIN-212ENST00000573126 EMILIN1Q9Y6C2 1016 aa14.27□□□□□ -0.12
RPAIN-212ENST00000573126 RIMBP3CA6NJZ7 1639 aa14.27□□□□□ -0.13
RPAIN-212ENST00000573126 RIMBP3BA6NNM3 1639 aa14.27□□□□□ -0.13
RPAIN-212ENST00000573126 RIMBP3Q9UFD9 1639 aa14.27□□□□□ -0.13
RPAIN-212ENST00000573126 RSPH6AQ9H0K4 717 aa14.27□□□□□ -0.13
RPAIN-212ENST00000573126 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
RPAIN-212ENST00000573126 UPF2Q9HAU5 1272 aaKnown RBP14.27□□□□□ -0.13
RPAIN-212ENST00000573126 A2ML1A8K2U0 1454 aa14.26□□□□□ -0.13
RPAIN-212ENST00000573126 PHACTR3Q96KR7 559 aa14.26□□□□□ -0.13
RPAIN-212ENST00000573126 RIMS2Q9UQ26 1411 aa14.26□□□□□ -0.13
RPAIN-212ENST00000573126 VIRMAQ69YN4 1812 aaKnown RBP14.26□□□□□ -0.13
RPAIN-212ENST00000573126 SLKQ9H2G2 1235 aaPredicted RBP14.26□□□□□ -0.13
RPAIN-212ENST00000573126 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
RPAIN-212ENST00000573126 NCKAP5LQ9HCH0 1330 aa14.25□□□□□ -0.13
RPAIN-212ENST00000573126 GSE1Q14687 1217 aa14.25□□□□□ -0.13
RPAIN-212ENST00000573126 NME9Q86XW9 330 aa14.25□□□□□ -0.13
RPAIN-212ENST00000573126 LRRC7Q96NW7 1537 aa14.25□□□□□ -0.13
RPAIN-212ENST00000573126 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
RPAIN-212ENST00000573126 TXNDC2Q86VQ3 553 aa14.25□□□□□ -0.13
RPAIN-212ENST00000573126 TBC1D32Q96NH3 1257 aa14.24□□□□□ -0.13
RPAIN-212ENST00000573126 KIF16BQ96L93 1317 aa14.24□□□□□ -0.13
RPAIN-212ENST00000573126 BECN1Q14457 450 aa14.24□□□□□ -0.13
RPAIN-212ENST00000573126 TSPOAP1O95153 1857 aa14.23□□□□□ -0.13
RPAIN-212ENST00000573126 HDAC1Q13547 482 aaPredicted RBP14.23□□□□□ -0.13
RPAIN-212ENST00000573126 ZBTB40Q9NUA8 1239 aa14.23□□□□□ -0.13
RPAIN-212ENST00000573126 METP08581 1390 aa14.23□□□□□ -0.13
RPAIN-212ENST00000573126 FAM135BQ49AJ0 1406 aa14.23□□□□□ -0.13
RPAIN-212ENST00000573126 WASLO00401 505 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-212ENST00000573126 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
RPAIN-212ENST00000573126 IL27Q8NEV9 243 aa14.22□□□□□ -0.13
RPAIN-212ENST00000573126 ZMYM3Q14202 1370 aa14.22□□□□□ -0.13
RPAIN-212ENST00000573126 ATP7BP35670 1465 aa14.22□□□□□ -0.13
RPAIN-212ENST00000573126 ELL2O00472 640 aaPredicted RBP14.22□□□□□ -0.13
RPAIN-212ENST00000573126 PPIP5K1Q6PFW1 1433 aa14.22□□□□□ -0.13
RPAIN-212ENST00000573126 RRS1Q15050 365 aaKnown RBP14.21□□□□□ -0.13
RPAIN-212ENST00000573126 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.13
RPAIN-212ENST00000573126 NFE2L2Q16236 605 aa14.21□□□□□ -0.13
RPAIN-212ENST00000573126 KIF20BQ96Q89 1820 aa14.21□□□□□ -0.13
RPAIN-212ENST00000573126 DIP2BQ9P265 1576 aa14.21□□□□□ -0.14
RPAIN-212ENST00000573126 MFAP1P55081 439 aaKnown RBP14.21□□□□□ -0.14
RPAIN-212ENST00000573126 ALDH1L2Q3SY69 923 aa14.21□□□□□ -0.14
RPAIN-212ENST00000573126 TSPYL6Q8N831 410 aa14.21□□□□□ -0.14
RPAIN-212ENST00000573126 DLC1Q96QB1 1528 aa14.2□□□□□ -0.14
RPAIN-212ENST00000573126 IL13P35225 146 aa14.2□□□□□ -0.14
RPAIN-212ENST00000573126 SMC5Q8IY18 1101 aa14.2□□□□□ -0.14
RPAIN-212ENST00000573126 NUDT16Q96DE0 195 aaKnown RBP14.2□□□□□ -0.14
RPAIN-212ENST00000573126 TBC1D2Q9BYX2 928 aa14.2□□□□□ -0.14
RPAIN-212ENST00000573126 SPATA31D1Q6ZQQ2 1576 aa14.19□□□□□ -0.14
RPAIN-212ENST00000573126 AGLP35573 1532 aa14.19□□□□□ -0.14
RPAIN-212ENST00000573126 CPSF1Q10570 1443 aaKnown RBP14.19□□□□□ -0.14
RPAIN-212ENST00000573126 EDC4Q6P2E9 1401 aaKnown RBP14.19□□□□□ -0.14
RPAIN-212ENST00000573126 ESF1Q9H501 851 aaKnown RBP14.19□□□□□ -0.14
RPAIN-212ENST00000573126 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
RPAIN-212ENST00000573126 COG3Q96JB2 828 aa14.18□□□□□ -0.14
RPAIN-212ENST00000573126 LNPKQ9C0E8 428 aa14.18□□□□□ -0.14
RPAIN-212ENST00000573126 CDC42BPGQ6DT37 1551 aa14.18□□□□□ -0.14
RPAIN-212ENST00000573126 VAMP4O75379 141 aa14.18□□□□□ -0.14
RPAIN-212ENST00000573126 CCDC61Q9Y6R9 512 aa14.18□□□□□ -0.14
RPAIN-212ENST00000573126 C1orf115Q9H7X2 142 aa14.17□□□□□ -0.14
RPAIN-212ENST00000573126 MBIPQ9NS73 344 aa14.17□□□□□ -0.14
RPAIN-212ENST00000573126 FAM83GA6ND36 823 aa14.17□□□□□ -0.14
RPAIN-212ENST00000573126 RTN4Q9NQC3 1192 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms