RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 EDC4Q6P2E9 1401 aaKnown RBP21.16■□□□□ 0.98
POLR2A-201ENST00000572844 RRP7AQ9Y3A4 280 aaKnown RBP21.16■□□□□ 0.98
POLR2A-201ENST00000572844 MAP2P11137 1827 aaKnown RBP21.15■□□□□ 0.98
POLR2A-201ENST00000572844 MYH16Q9H6N6 1097 aa21.15■□□□□ 0.98
POLR2A-201ENST00000572844 PNNQ9H307 717 aaKnown RBP21.14■□□□□ 0.98
POLR2A-201ENST00000572844 ITSN1Q15811 1721 aa21.14■□□□□ 0.97
POLR2A-201ENST00000572844 NEUROD2Q15784 382 aa21.14■□□□□ 0.97
POLR2A-201ENST00000572844 PPIP5K1Q6PFW1 1433 aa21.13■□□□□ 0.97
POLR2A-201ENST00000572844 DIAPH1O60610 1272 aaKnown RBP21.12■□□□□ 0.97
POLR2A-201ENST00000572844 ADAMTS13Q76LX8 1427 aa21.12■□□□□ 0.97
POLR2A-201ENST00000572844 PLEKHG1Q9ULL1 1385 aa21.12■□□□□ 0.97
POLR2A-201ENST00000572844 CT47B1P0C2W7 299 aaPredicted RBP21.11■□□□□ 0.97
POLR2A-201ENST00000572844 AAMPQ13685 434 aa21.11■□□□□ 0.97
POLR2A-201ENST00000572844 RARSP54136 660 aaKnown RBP21.11■□□□□ 0.97
POLR2A-201ENST00000572844 PDE4AP27815 886 aa21.1■□□□□ 0.97
POLR2A-201ENST00000572844 BACH2Q9BYV9 841 aa21.1■□□□□ 0.97
POLR2A-201ENST00000572844 C3P01024 1663 aa21.1■□□□□ 0.97
POLR2A-201ENST00000572844 IL16Q14005 1332 aa21.1■□□□□ 0.97
POLR2A-201ENST00000572844 TMPOP42166 694 aaKnown RBP21.09■□□□□ 0.97
POLR2A-201ENST00000572844 U2SURPO15042 1029 aaKnown RBP21.09■□□□□ 0.97
POLR2A-201ENST00000572844 ANP32AP39687 249 aaKnown RBP21.09■□□□□ 0.97
POLR2A-201ENST00000572844 TXNDC2Q86VQ3 553 aa21.09■□□□□ 0.97
POLR2A-201ENST00000572844 MAPK8IP3Q9UPT6 1336 aa21.08■□□□□ 0.97
POLR2A-201ENST00000572844 AATKQ6ZMQ8 1374 aa21.08■□□□□ 0.97
POLR2A-201ENST00000572844 NUDT16Q96DE0 195 aaKnown RBP21.08■□□□□ 0.96
POLR2A-201ENST00000572844 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.96
POLR2A-201ENST00000572844 TOPAZ1Q8N9V7 1692 aa21.08■□□□□ 0.96
POLR2A-201ENST00000572844 SLIT1O75093 1534 aa21.07■□□□□ 0.96
POLR2A-201ENST00000572844 FCHSD2O94868 740 aa21.06■□□□□ 0.96
POLR2A-201ENST00000572844 POLKQ9UBT6 870 aa21.06■□□□□ 0.96
POLR2A-201ENST00000572844 CDK12Q9NYV4 1490 aaPredicted RBP21.06■□□□□ 0.96
POLR2A-201ENST00000572844 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.06■□□□□ 0.96
POLR2A-201ENST00000572844 FER1L4A9Z1Z3 1794 aa21.05■□□□□ 0.96
POLR2A-201ENST00000572844 ERICH6Q7L0X2 663 aa21.05■□□□□ 0.96
POLR2A-201ENST00000572844 TRIM35Q9UPQ4 493 aa21.05■□□□□ 0.96
POLR2A-201ENST00000572844 ARHGAP23Q9P227 1491 aa21.05■□□□□ 0.96
POLR2A-201ENST00000572844 LRRC7Q96NW7 1537 aa21.05■□□□□ 0.96
POLR2A-201ENST00000572844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.05■□□□□ 0.96
POLR2A-201ENST00000572844 ZNF692Q9BU19 519 aaPredicted RBP21.05■□□□□ 0.96
POLR2A-201ENST00000572844 CANXP27824 592 aaKnown RBP21.04■□□□□ 0.96
POLR2A-201ENST00000572844 IPO9Q96P70 1041 aaKnown RBP21.04■□□□□ 0.96
POLR2A-201ENST00000572844 ROBO2Q9HCK4 1378 aa21.03■□□□□ 0.96
POLR2A-201ENST00000572844 NRKQ7Z2Y5 1582 aa21.03■□□□□ 0.96
POLR2A-201ENST00000572844 CLUAP1Q96AJ1 413 aa21.01■□□□□ 0.95
POLR2A-201ENST00000572844 DIP2AQ14689 1571 aa21.01■□□□□ 0.95
POLR2A-201ENST00000572844 NOP58Q9Y2X3 529 aaKnown RBP21■□□□□ 0.95
POLR2A-201ENST00000572844 LTKP29376 864 aa21■□□□□ 0.95
POLR2A-201ENST00000572844 RSPH6AQ9H0K4 717 aa21■□□□□ 0.95
POLR2A-201ENST00000572844 PRR36Q9H6K5 1346 aa20.99■□□□□ 0.95
POLR2A-201ENST00000572844 PANK1Q8TE04 598 aa20.99■□□□□ 0.95
POLR2A-201ENST00000572844 RIPK4P57078 832 aa20.98■□□□□ 0.95
POLR2A-201ENST00000572844 NME9Q86XW9 330 aa20.98■□□□□ 0.95
POLR2A-201ENST00000572844 COG6Q9Y2V7 657 aa20.98■□□□□ 0.95
POLR2A-201ENST00000572844 EID1Q9Y6B2 187 aa20.98■□□□□ 0.95
POLR2A-201ENST00000572844 FRAT1Q92837 279 aaPredicted RBP20.97■□□□□ 0.95
POLR2A-201ENST00000572844 COG3Q96JB2 828 aa20.97■□□□□ 0.95
POLR2A-201ENST00000572844 NEFMP07197 916 aa20.97■□□□□ 0.95
POLR2A-201ENST00000572844 PLEKHG3A1L390 1219 aa20.96■□□□□ 0.95
POLR2A-201ENST00000572844 IL13P35225 146 aa20.96■□□□□ 0.95
POLR2A-201ENST00000572844 NALCNQ8IZF0 1738 aa20.96■□□□□ 0.95
POLR2A-201ENST00000572844 VIRMAQ69YN4 1812 aaKnown RBP20.95■□□□□ 0.94
POLR2A-201ENST00000572844 TBX22Q9Y458 520 aa20.95■□□□□ 0.94
POLR2A-201ENST00000572844 PTCH1Q13635 1447 aa20.95■□□□□ 0.94
POLR2A-201ENST00000572844 PTPRUQ92729 1446 aa20.95■□□□□ 0.94
POLR2A-201ENST00000572844 ZKSCAN2Q63HK3 967 aa20.94■□□□□ 0.94
POLR2A-201ENST00000572844 RIMS1Q86UR5 1692 aaKnown RBP20.94■□□□□ 0.94
POLR2A-201ENST00000572844 PRKAR2BP31323 418 aa20.93■□□□□ 0.94
POLR2A-201ENST00000572844 EXOSC9Q06265 439 aaKnown RBP20.93■□□□□ 0.94
POLR2A-201ENST00000572844 PMFBP1Q8TBY8 1022 aa20.93■□□□□ 0.94
POLR2A-201ENST00000572844 TSR2Q969E8 191 aaKnown RBP20.93■□□□□ 0.94
POLR2A-201ENST00000572844 IGHDP01880 384 aa20.93■□□□□ 0.94
POLR2A-201ENST00000572844 SKAP1Q86WV1 359 aa20.93■□□□□ 0.94
POLR2A-201ENST00000572844 DLG5Q8TDM6 1919 aa20.93■□□□□ 0.94
POLR2A-201ENST00000572844 CEBPAP49715 358 aaPredicted RBP20.92■□□□□ 0.94
POLR2A-201ENST00000572844 NFE2L2Q16236 605 aa20.92■□□□□ 0.94
POLR2A-201ENST00000572844 EMILIN1Q9Y6C2 1016 aa20.92■□□□□ 0.94
POLR2A-201ENST00000572844 NCKAP5LQ9HCH0 1330 aa20.92■□□□□ 0.94
POLR2A-201ENST00000572844 RLBP1P12271 317 aa20.92■□□□□ 0.94
POLR2A-201ENST00000572844 FAM161AQ3B820 660 aa20.92■□□□□ 0.94
POLR2A-201ENST00000572844 PPM1GO15355 546 aaPredicted RBP20.91■□□□□ 0.94
POLR2A-201ENST00000572844 CALD1Q05682 793 aaKnown RBP20.91■□□□□ 0.94
POLR2A-201ENST00000572844 ZNF428Q96B54 188 aa20.91■□□□□ 0.94
POLR2A-201ENST00000572844 ZBTB47Q9UFB7 747 aaPredicted RBP20.91■□□□□ 0.94
POLR2A-201ENST00000572844 XRN1Q8IZH2 1706 aaKnown RBP20.91■□□□□ 0.94
POLR2A-201ENST00000572844 FBLN1P23142 703 aa20.9■□□□□ 0.94
POLR2A-201ENST00000572844 THEMISQ8N1K5 641 aaPredicted RBP20.9■□□□□ 0.94
POLR2A-201ENST00000572844 ZRANB1Q9UGI0 708 aa20.9■□□□□ 0.94
POLR2A-201ENST00000572844 OVOS2A0A0J9YW53 1432 aa20.9■□□□□ 0.94
POLR2A-201ENST00000572844 OVOS2Q6IE36 1432 aa20.9■□□□□ 0.94
POLR2A-201ENST00000572844 MVPQ14764 893 aaKnown RBP20.9■□□□□ 0.94
POLR2A-201ENST00000572844 USP6P35125 1406 aa20.9■□□□□ 0.94
POLR2A-201ENST00000572844 TTC21BQ7Z4L5 1316 aa20.9■□□□□ 0.94
POLR2A-201ENST00000572844 BCL2L13Q9BXK5 485 aa20.89■□□□□ 0.93
POLR2A-201ENST00000572844 ALDH1L2Q3SY69 923 aa20.89■□□□□ 0.93
POLR2A-201ENST00000572844 DZIP1LQ8IYY4 767 aaKnown RBP20.89■□□□□ 0.93
POLR2A-201ENST00000572844 SSH2Q76I76 1423 aa20.88■□□□□ 0.93
POLR2A-201ENST00000572844 SMC4Q9NTJ3 1288 aa20.88■□□□□ 0.93
POLR2A-201ENST00000572844 ACEP12821 1306 aa20.88■□□□□ 0.93
POLR2A-201ENST00000572844 PAK3O75914 559 aaPredicted RBP20.87■□□□□ 0.93
POLR2A-201ENST00000572844 BRPF1P55201 1214 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms