RNA–Protein interactions for RNA: ENST00000570015.1

CISTR-201, chondrogenesis-associated transcript, humanhuman

TSL 2 BASIC

Gene CISTR, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISTR-201ENST00000570015 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.16■□□□□ 0.18
CISTR-201ENST00000570015 PHLPP1O60346 1717 aa16.16■□□□□ 0.18
CISTR-201ENST00000570015 SSH2Q76I76 1423 aa16.15■□□□□ 0.18
CISTR-201ENST00000570015 ILDR1Q86SU0 546 aaPredicted RBP16.15■□□□□ 0.18
CISTR-201ENST00000570015 CARD14Q9BXL6 1004 aa16.15■□□□□ 0.18
CISTR-201ENST00000570015 NSD3Q9BZ95 1437 aa16.15■□□□□ 0.18
CISTR-201ENST00000570015 SOS2Q07890 1332 aaPredicted RBP16.15■□□□□ 0.18
CISTR-201ENST00000570015 NPC1L1Q9UHC9 1359 aa16.14■□□□□ 0.17
CISTR-201ENST00000570015 NHSL1Q5SYE7 1610 aa16.14■□□□□ 0.17
CISTR-201ENST00000570015 AHDC1Q5TGY3 1603 aaPredicted RBP16.14■□□□□ 0.17
CISTR-201ENST00000570015 PXDNQ92626 1479 aa16.14■□□□□ 0.17
CISTR-201ENST00000570015 CNGB1Q14028 1251 aaPredicted RBP16.12■□□□□ 0.17
CISTR-201ENST00000570015 LRRC59Q96AG4 307 aaKnown RBP16.12■□□□□ 0.17
CISTR-201ENST00000570015 KNSTRNQ9Y448 316 aa16.12■□□□□ 0.17
CISTR-201ENST00000570015 TTC21BQ7Z4L5 1316 aa16.12■□□□□ 0.17
CISTR-201ENST00000570015 NSD2O96028 1365 aa16.12■□□□□ 0.17
CISTR-201ENST00000570015 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
CISTR-201ENST00000570015 KIF20BQ96Q89 1820 aa16.11■□□□□ 0.17
CISTR-201ENST00000570015 NME9Q86XW9 330 aa16.11■□□□□ 0.17
CISTR-201ENST00000570015 ZRANB1Q9UGI0 708 aa16.11■□□□□ 0.17
CISTR-201ENST00000570015 CGNL1Q0VF96 1302 aa16.11■□□□□ 0.17
CISTR-201ENST00000570015 SPATA31A3Q5VYP0 1347 aa16.11■□□□□ 0.17
CISTR-201ENST00000570015 SBNO1A3KN83 1393 aa16.11■□□□□ 0.17
CISTR-201ENST00000570015 AMER1Q5JTC6 1135 aaPredicted RBP16.1■□□□□ 0.17
CISTR-201ENST00000570015 DIEXFQ68CQ4 756 aaKnown RBP16.1■□□□□ 0.17
CISTR-201ENST00000570015 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
CISTR-201ENST00000570015 TTC21AQ8NDW8 1320 aa16.1■□□□□ 0.17
CISTR-201ENST00000570015 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
CISTR-201ENST00000570015 COL16A1Q07092 1604 aaPredicted RBP16.09■□□□□ 0.17
CISTR-201ENST00000570015 USP54Q70EL1 1684 aa16.09■□□□□ 0.17
CISTR-201ENST00000570015 NUTM2BA6NNL0 878 aaPredicted RBP16.09■□□□□ 0.17
CISTR-201ENST00000570015 NUTM2EB1AL46 878 aaPredicted RBP16.09■□□□□ 0.17
CISTR-201ENST00000570015 NUTM2AQ8IVF1 878 aaPredicted RBP16.09■□□□□ 0.17
CISTR-201ENST00000570015 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
CISTR-201ENST00000570015 TNS3Q68CZ2 1445 aa16.09■□□□□ 0.17
CISTR-201ENST00000570015 SOX12O15370 315 aa16.07■□□□□ 0.16
CISTR-201ENST00000570015 NLRP6P59044 892 aa16.07■□□□□ 0.16
CISTR-201ENST00000570015 PNPLA6Q8IY17 1366 aa16.07■□□□□ 0.16
CISTR-201ENST00000570015 PIK3C2AO00443 1686 aa16.07■□□□□ 0.16
CISTR-201ENST00000570015 ALS2Q96Q42 1657 aa16.07■□□□□ 0.16
CISTR-201ENST00000570015 JCADQ9P266 1359 aa16.06■□□□□ 0.16
CISTR-201ENST00000570015 HAP1P54257 671 aaPredicted RBP16.06■□□□□ 0.16
CISTR-201ENST00000570015 GGNBP2Q9H3C7 697 aa16.06■□□□□ 0.16
CISTR-201ENST00000570015 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
CISTR-201ENST00000570015 USP31Q70CQ4 1352 aa16.05■□□□□ 0.16
CISTR-201ENST00000570015 OVOS2A0A0J9YW53 1432 aa16.04■□□□□ 0.16
CISTR-201ENST00000570015 OVOS2Q6IE36 1432 aa16.04■□□□□ 0.16
CISTR-201ENST00000570015 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
CISTR-201ENST00000570015 FYB1O15117 783 aa16.04■□□□□ 0.16
CISTR-201ENST00000570015 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
CISTR-201ENST00000570015 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
CISTR-201ENST00000570015 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.16
CISTR-201ENST00000570015 MED1Q15648 1581 aaPredicted RBP16.02■□□□□ 0.16
CISTR-201ENST00000570015 ANP32CO43423 234 aa16.02■□□□□ 0.16
CISTR-201ENST00000570015 ADAMTS2O95450 1211 aa16.02■□□□□ 0.16
CISTR-201ENST00000570015 CC2D1BQ5T0F9 858 aaKnown RBP16.02■□□□□ 0.16
CISTR-201ENST00000570015 RALBP1Q15311 655 aa16.01■□□□□ 0.15
CISTR-201ENST00000570015 COG3Q96JB2 828 aa16.01■□□□□ 0.15
CISTR-201ENST00000570015 PRKRIP1Q9H875 184 aaPredicted RBP16.01■□□□□ 0.15
CISTR-201ENST00000570015 TNNT2P45379 298 aaPredicted RBP16■□□□□ 0.15
CISTR-201ENST00000570015 FBLN1P23142 703 aa15.99■□□□□ 0.15
CISTR-201ENST00000570015 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
CISTR-201ENST00000570015 MEX3CQ5U5Q3 659 aaKnown RBP15.99■□□□□ 0.15
CISTR-201ENST00000570015 SLIT3O75094 1523 aa15.99■□□□□ 0.15
CISTR-201ENST00000570015 USP19O94966 1318 aa15.98■□□□□ 0.15
CISTR-201ENST00000570015 CRYBG1Q9Y4K1 1723 aa15.98■□□□□ 0.15
CISTR-201ENST00000570015 MORC1Q86VD1 984 aa15.97■□□□□ 0.15
CISTR-201ENST00000570015 SHPRHQ149N8 1683 aa15.97■□□□□ 0.15
CISTR-201ENST00000570015 COL22A1Q8NFW1 1626 aaPredicted RBP15.97■□□□□ 0.15
CISTR-201ENST00000570015 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
CISTR-201ENST00000570015 GCP02774 474 aa15.96■□□□□ 0.15
CISTR-201ENST00000570015 AATKQ6ZMQ8 1374 aa15.96■□□□□ 0.15
CISTR-201ENST00000570015 PHRF1Q9P1Y6 1649 aaKnown RBP15.95■□□□□ 0.14
CISTR-201ENST00000570015 CHRNA2Q15822 529 aa15.95■□□□□ 0.14
CISTR-201ENST00000570015 MYBBP1AQ9BQG0 1328 aaKnown RBP15.94■□□□□ 0.14
CISTR-201ENST00000570015 NFAT5O94916 1531 aa15.94■□□□□ 0.14
CISTR-201ENST00000570015 LRP6O75581 1613 aa15.94■□□□□ 0.14
CISTR-201ENST00000570015 ABCA3Q99758 1704 aa15.94■□□□□ 0.14
CISTR-201ENST00000570015 C8orf37Q96NL8 207 aa15.94■□□□□ 0.14
CISTR-201ENST00000570015 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
CISTR-201ENST00000570015 KCNH5Q8NCM2 988 aa15.93■□□□□ 0.14
CISTR-201ENST00000570015 PRDM11Q9NQV5 511 aa15.93■□□□□ 0.14
CISTR-201ENST00000570015 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
CISTR-201ENST00000570015 FAM83GA6ND36 823 aa15.92■□□□□ 0.14
CISTR-201ENST00000570015 PPM1GO15355 546 aaPredicted RBP15.92■□□□□ 0.14
CISTR-201ENST00000570015 RRS1Q15050 365 aaKnown RBP15.92■□□□□ 0.14
CISTR-201ENST00000570015 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
CISTR-201ENST00000570015 NGLY1Q96IV0 654 aa15.91■□□□□ 0.14
CISTR-201ENST00000570015 KIF24Q5T7B8 1368 aa15.9■□□□□ 0.14
CISTR-201ENST00000570015 MIER1Q8N108 512 aa15.9■□□□□ 0.14
CISTR-201ENST00000570015 CDK12Q9NYV4 1490 aaPredicted RBP15.9■□□□□ 0.14
CISTR-201ENST00000570015 MAP2P11137 1827 aaKnown RBP15.89■□□□□ 0.13
CISTR-201ENST00000570015 CCER2I3L3R5 266 aa15.89■□□□□ 0.13
CISTR-201ENST00000570015 MAP3K19Q56UN5 1328 aa15.89■□□□□ 0.13
CISTR-201ENST00000570015 ABCC6O95255 1503 aa15.89■□□□□ 0.13
CISTR-201ENST00000570015 LTN1O94822 1766 aa15.88■□□□□ 0.13
CISTR-201ENST00000570015 AMPHP49418 695 aa15.88■□□□□ 0.13
CISTR-201ENST00000570015 ARHGEF25Q86VW2 580 aa15.88■□□□□ 0.13
CISTR-201ENST00000570015 EMILIN1Q9Y6C2 1016 aa15.88■□□□□ 0.13
CISTR-201ENST00000570015 RTL1A6NKG5 1358 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms