RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 DISP3Q9P2K9 1392 aa13.52□□□□□ -0.25
HCCAT5-201ENST00000569990 TNS3Q68CZ2 1445 aa13.52□□□□□ -0.25
HCCAT5-201ENST00000569990 COL22A1Q8NFW1 1626 aaPredicted RBP13.51□□□□□ -0.25
HCCAT5-201ENST00000569990 ATAD2Q6PL18 1390 aa13.51□□□□□ -0.25
HCCAT5-201ENST00000569990 ACEP12821 1306 aa13.51□□□□□ -0.25
HCCAT5-201ENST00000569990 RBM42Q9BTD8 480 aaKnown RBP13.51□□□□□ -0.25
HCCAT5-201ENST00000569990 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
HCCAT5-201ENST00000569990 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
HCCAT5-201ENST00000569990 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
HCCAT5-201ENST00000569990 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
HCCAT5-201ENST00000569990 SLC24A1O60721 1099 aa13.49□□□□□ -0.25
HCCAT5-201ENST00000569990 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
HCCAT5-201ENST00000569990 ARHGEF10O15013 1369 aa13.48□□□□□ -0.25
HCCAT5-201ENST00000569990 PUS7Q96PZ0 661 aaKnown RBP13.48□□□□□ -0.25
HCCAT5-201ENST00000569990 ALS2Q96Q42 1657 aa13.47□□□□□ -0.25
HCCAT5-201ENST00000569990 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
HCCAT5-201ENST00000569990 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
HCCAT5-201ENST00000569990 USP6P35125 1406 aa13.46□□□□□ -0.26
HCCAT5-201ENST00000569990 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
HCCAT5-201ENST00000569990 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.26
HCCAT5-201ENST00000569990 TMF1P82094 1093 aa13.45□□□□□ -0.26
HCCAT5-201ENST00000569990 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
HCCAT5-201ENST00000569990 CPSF1Q10570 1443 aaKnown RBP13.45□□□□□ -0.26
HCCAT5-201ENST00000569990 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
HCCAT5-201ENST00000569990 ADAMTS2O95450 1211 aa13.44□□□□□ -0.26
HCCAT5-201ENST00000569990 RGS17Q9UGC6 210 aaPredicted RBP13.44□□□□□ -0.26
HCCAT5-201ENST00000569990 HSPA5P11021 654 aaKnown RBP13.43□□□□□ -0.26
HCCAT5-201ENST00000569990 SSH2Q76I76 1423 aa13.43□□□□□ -0.26
HCCAT5-201ENST00000569990 CABLES1Q8TDN4 633 aa13.43□□□□□ -0.26
HCCAT5-201ENST00000569990 AKAP12Q02952 1782 aa13.43□□□□□ -0.26
HCCAT5-201ENST00000569990 CD163L1Q9NR16 1453 aa13.42□□□□□ -0.26
HCCAT5-201ENST00000569990 ABCA3Q99758 1704 aa13.42□□□□□ -0.26
HCCAT5-201ENST00000569990 TMC1Q8TDI8 760 aa13.42□□□□□ -0.26
HCCAT5-201ENST00000569990 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
HCCAT5-201ENST00000569990 SLC12A5Q9H2X9 1139 aa13.42□□□□□ -0.26
HCCAT5-201ENST00000569990 NINLQ9Y2I6 1382 aa13.42□□□□□ -0.26
HCCAT5-201ENST00000569990 POLA2Q14181 598 aa13.41□□□□□ -0.26
HCCAT5-201ENST00000569990 C8orf37Q96NL8 207 aa13.41□□□□□ -0.26
HCCAT5-201ENST00000569990 KTN1Q86UP2 1357 aaKnown RBP13.41□□□□□ -0.26
HCCAT5-201ENST00000569990 NRKQ7Z2Y5 1582 aa13.41□□□□□ -0.26
HCCAT5-201ENST00000569990 CRYBG1Q9Y4K1 1723 aa13.4□□□□□ -0.26
HCCAT5-201ENST00000569990 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
HCCAT5-201ENST00000569990 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
HCCAT5-201ENST00000569990 ABTB2Q8N961 1025 aa13.4□□□□□ -0.26
HCCAT5-201ENST00000569990 AFF2P51816 1311 aa13.39□□□□□ -0.27
HCCAT5-201ENST00000569990 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
HCCAT5-201ENST00000569990 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
HCCAT5-201ENST00000569990 HAP1P54257 671 aaPredicted RBP13.39□□□□□ -0.27
HCCAT5-201ENST00000569990 NUTM2GQ5VZR2 741 aa13.39□□□□□ -0.27
HCCAT5-201ENST00000569990 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
HCCAT5-201ENST00000569990 A0A1W2PP64 1363 aa13.39□□□□□ -0.27
HCCAT5-201ENST00000569990 TTC21BQ7Z4L5 1316 aa13.39□□□□□ -0.27
HCCAT5-201ENST00000569990 ZNF772Q68DY9 489 aaPredicted RBP13.38□□□□□ -0.27
HCCAT5-201ENST00000569990 POTEAQ6S8J7 498 aa13.38□□□□□ -0.27
HCCAT5-201ENST00000569990 HDGFL2Q7Z4V5 671 aaPredicted RBP13.38□□□□□ -0.27
HCCAT5-201ENST00000569990 TERF2IPQ9NYB0 399 aa13.38□□□□□ -0.27
HCCAT5-201ENST00000569990 USP19O94966 1318 aa13.38□□□□□ -0.27
HCCAT5-201ENST00000569990 TTC21AQ8NDW8 1320 aa13.38□□□□□ -0.27
HCCAT5-201ENST00000569990 PIK3C2AO00443 1686 aa13.37□□□□□ -0.27
HCCAT5-201ENST00000569990 ILDR2Q71H61 639 aa13.37□□□□□ -0.27
HCCAT5-201ENST00000569990 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
HCCAT5-201ENST00000569990 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
HCCAT5-201ENST00000569990 PHRF1Q9P1Y6 1649 aaKnown RBP13.37□□□□□ -0.27
HCCAT5-201ENST00000569990 EDC4Q6P2E9 1401 aaKnown RBP13.37□□□□□ -0.27
HCCAT5-201ENST00000569990 ANKRD36BQ8N2N9 1353 aa13.36□□□□□ -0.27
HCCAT5-201ENST00000569990 NLRP6P59044 892 aa13.36□□□□□ -0.27
HCCAT5-201ENST00000569990 SLIT2O94813 1529 aa13.35□□□□□ -0.27
HCCAT5-201ENST00000569990 MYOM1P52179 1685 aa13.35□□□□□ -0.27
HCCAT5-201ENST00000569990 SLIT3O75094 1523 aa13.34□□□□□ -0.27
HCCAT5-201ENST00000569990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.34□□□□□ -0.27
HCCAT5-201ENST00000569990 USP21Q9UK80 565 aa13.34□□□□□ -0.27
HCCAT5-201ENST00000569990 BCL9LQ86UU0 1499 aa13.34□□□□□ -0.27
HCCAT5-201ENST00000569990 FAM83GA6ND36 823 aa13.33□□□□□ -0.28
HCCAT5-201ENST00000569990 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
HCCAT5-201ENST00000569990 GCP02774 474 aa13.33□□□□□ -0.28
HCCAT5-201ENST00000569990 USP31Q70CQ4 1352 aa13.32□□□□□ -0.28
HCCAT5-201ENST00000569990 KIAA0232Q92628 1395 aa13.32□□□□□ -0.28
HCCAT5-201ENST00000569990 PLCH1Q4KWH8 1693 aa13.32□□□□□ -0.28
HCCAT5-201ENST00000569990 ZC3H6P61129 1189 aaKnown RBP13.32□□□□□ -0.28
HCCAT5-201ENST00000569990 NME9Q86XW9 330 aa13.32□□□□□ -0.28
HCCAT5-201ENST00000569990 PRDM11Q9NQV5 511 aa13.32□□□□□ -0.28
HCCAT5-201ENST00000569990 COL14A1Q05707 1796 aaKnown RBP13.32□□□□□ -0.28
HCCAT5-201ENST00000569990 CPDO75976 1380 aa13.32□□□□□ -0.28
HCCAT5-201ENST00000569990 USP54Q70EL1 1684 aa13.31□□□□□ -0.28
HCCAT5-201ENST00000569990 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
HCCAT5-201ENST00000569990 POLR3GLQ9BT43 218 aa13.31□□□□□ -0.28
HCCAT5-201ENST00000569990 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
HCCAT5-201ENST00000569990 ZRANB1Q9UGI0 708 aa13.31□□□□□ -0.28
HCCAT5-201ENST00000569990 ATRNO75882 1429 aa13.3□□□□□ -0.28
HCCAT5-201ENST00000569990 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.3□□□□□ -0.28
HCCAT5-201ENST00000569990 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
HCCAT5-201ENST00000569990 CHRDL2Q6WN34 429 aa13.3□□□□□ -0.28
HCCAT5-201ENST00000569990 TRPC5Q9UL62 973 aaPredicted RBP13.3□□□□□ -0.28
HCCAT5-201ENST00000569990 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
HCCAT5-201ENST00000569990 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
HCCAT5-201ENST00000569990 CHRNA2Q15822 529 aa13.29□□□□□ -0.28
HCCAT5-201ENST00000569990 KCNH5Q8NCM2 988 aa13.29□□□□□ -0.28
HCCAT5-201ENST00000569990 CARD14Q9BXL6 1004 aa13.29□□□□□ -0.28
HCCAT5-201ENST00000569990 BTG4Q9NY30 223 aa13.29□□□□□ -0.28
HCCAT5-201ENST00000569990 NFAT5O94916 1531 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms