RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
LINC00559-201ENST00000569476 FCHSD2O94868 740 aa10.19□□□□□ -0.78
LINC00559-201ENST00000569476 XRN1Q8IZH2 1706 aaKnown RBP10.19□□□□□ -0.78
LINC00559-201ENST00000569476 ZNF142P52746 1687 aaPredicted RBP10.19□□□□□ -0.78
LINC00559-201ENST00000569476 PLEKHF1Q96S99 279 aa10.19□□□□□ -0.78
LINC00559-201ENST00000569476 CABP2Q9NPB3 220 aa10.19□□□□□ -0.78
LINC00559-201ENST00000569476 ADAMTS13Q76LX8 1427 aa10.19□□□□□ -0.78
LINC00559-201ENST00000569476 WASLO00401 505 aaPredicted RBP10.18□□□□□ -0.78
LINC00559-201ENST00000569476 TCP11L2Q8N4U5 519 aa10.18□□□□□ -0.78
LINC00559-201ENST00000569476 BACH2Q9BYV9 841 aa10.18□□□□□ -0.78
LINC00559-201ENST00000569476 FYB1O15117 783 aa10.18□□□□□ -0.78
LINC00559-201ENST00000569476 FBXO31Q5XUX0 539 aaPredicted RBP10.18□□□□□ -0.78
LINC00559-201ENST00000569476 PMFBP1Q8TBY8 1022 aa10.18□□□□□ -0.78
LINC00559-201ENST00000569476 MAPK8IP3Q9UPT6 1336 aa10.18□□□□□ -0.78
LINC00559-201ENST00000569476 ANKARQ7Z5J8 1434 aa10.18□□□□□ -0.78
LINC00559-201ENST00000569476 IPO9Q96P70 1041 aaKnown RBP10.18□□□□□ -0.78
LINC00559-201ENST00000569476 CHMP4BQ9H444 224 aaKnown RBP10.18□□□□□ -0.78
LINC00559-201ENST00000569476 ERICH6Q7L0X2 663 aa10.17□□□□□ -0.78
LINC00559-201ENST00000569476 DIAPH1O60610 1272 aaKnown RBP10.16□□□□□ -0.78
LINC00559-201ENST00000569476 LMOD3Q0VAK6 560 aa10.16□□□□□ -0.78
LINC00559-201ENST00000569476 ALDH1L2Q3SY69 923 aa10.16□□□□□ -0.78
LINC00559-201ENST00000569476 CCDC146Q8IYE0 955 aa10.16□□□□□ -0.78
LINC00559-201ENST00000569476 KIF24Q5T7B8 1368 aa10.16□□□□□ -0.78
LINC00559-201ENST00000569476 RARSP54136 660 aaKnown RBP10.16□□□□□ -0.78
LINC00559-201ENST00000569476 PLPPR3Q6T4P5 718 aa10.16□□□□□ -0.78
LINC00559-201ENST00000569476 NOP58Q9Y2X3 529 aaKnown RBP10.15□□□□□ -0.78
LINC00559-201ENST00000569476 RGPD1P0DJD0 1748 aa10.15□□□□□ -0.78
LINC00559-201ENST00000569476 PDE4AP27815 886 aa10.15□□□□□ -0.78
LINC00559-201ENST00000569476 MINK1Q8N4C8 1332 aaPredicted RBP10.15□□□□□ -0.78
LINC00559-201ENST00000569476 NEFMP07197 916 aa10.14□□□□□ -0.79
LINC00559-201ENST00000569476 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.14□□□□□ -0.79
LINC00559-201ENST00000569476 PLEKHG3A1L390 1219 aa10.14□□□□□ -0.79
LINC00559-201ENST00000569476 MAP2P11137 1827 aaKnown RBP10.14□□□□□ -0.79
LINC00559-201ENST00000569476 USP31Q70CQ4 1352 aa10.14□□□□□ -0.79
LINC00559-201ENST00000569476 TTC21AQ8NDW8 1320 aa10.14□□□□□ -0.79
LINC00559-201ENST00000569476 SALL2Q9Y467 1007 aaPredicted RBP10.14□□□□□ -0.79
LINC00559-201ENST00000569476 METP08581 1390 aa10.14□□□□□ -0.79
LINC00559-201ENST00000569476 TMPOP42166 694 aaKnown RBP10.13□□□□□ -0.79
LINC00559-201ENST00000569476 HAP1P54257 671 aaPredicted RBP10.13□□□□□ -0.79
LINC00559-201ENST00000569476 CLUAP1Q96AJ1 413 aa10.13□□□□□ -0.79
LINC00559-201ENST00000569476 CCDC61Q9Y6R9 512 aa10.13□□□□□ -0.79
LINC00559-201ENST00000569476 OVOS2A0A0J9YW53 1432 aa10.13□□□□□ -0.79
LINC00559-201ENST00000569476 OVOS2Q6IE36 1432 aa10.13□□□□□ -0.79
LINC00559-201ENST00000569476 KIF16BQ96L93 1317 aa10.13□□□□□ -0.79
LINC00559-201ENST00000569476 MSH5O43196 834 aa10.13□□□□□ -0.79
LINC00559-201ENST00000569476 U2AF1L5P0DN76 240 aaPredicted RBP10.13□□□□□ -0.79
LINC00559-201ENST00000569476 U2AF1Q01081 240 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC00559-201ENST00000569476 FAM161AQ3B820 660 aa10.13□□□□□ -0.79
LINC00559-201ENST00000569476 TBX22Q9Y458 520 aa10.13□□□□□ -0.79
LINC00559-201ENST00000569476 PTPRUQ92729 1446 aa10.12□□□□□ -0.79
LINC00559-201ENST00000569476 STK26Q9P289 416 aa10.12□□□□□ -0.79
LINC00559-201ENST00000569476 FMN2Q9NZ56 1722 aa10.12□□□□□ -0.79
LINC00559-201ENST00000569476 SSH2Q76I76 1423 aa10.12□□□□□ -0.79
LINC00559-201ENST00000569476 IPO8O15397 1037 aaKnown RBP10.11□□□□□ -0.79
LINC00559-201ENST00000569476 ARHGAP45Q92619 1136 aa10.11□□□□□ -0.79
LINC00559-201ENST00000569476 SPINK5Q9NQ38 1064 aaPredicted RBP10.11□□□□□ -0.79
LINC00559-201ENST00000569476 CABP1Q9NZU7 370 aa10.11□□□□□ -0.79
LINC00559-201ENST00000569476 EIF5BO60841 1220 aaKnown RBP10.11□□□□□ -0.79
LINC00559-201ENST00000569476 ZKSCAN2Q63HK3 967 aa10.11□□□□□ -0.79
LINC00559-201ENST00000569476 TTC21BQ7Z4L5 1316 aa10.11□□□□□ -0.79
LINC00559-201ENST00000569476 EID1Q9Y6B2 187 aa10.1□□□□□ -0.79
LINC00559-201ENST00000569476 PLIN1O60240 522 aa10.1□□□□□ -0.79
LINC00559-201ENST00000569476 NUDT16Q96DE0 195 aaKnown RBP10.1□□□□□ -0.79
LINC00559-201ENST00000569476 RSPH6AQ9H0K4 717 aa10.1□□□□□ -0.79
LINC00559-201ENST00000569476 NFE2L2Q16236 605 aa10.1□□□□□ -0.79
LINC00559-201ENST00000569476 RWDD1Q9H446 243 aaPredicted RBP10.1□□□□□ -0.79
LINC00559-201ENST00000569476 IFT57Q9NWB7 429 aa10.1□□□□□ -0.79
LINC00559-201ENST00000569476 USP6P35125 1406 aa10.1□□□□□ -0.79
LINC00559-201ENST00000569476 CEP170BQ9Y4F5 1589 aaPredicted RBP10.1□□□□□ -0.79
LINC00559-201ENST00000569476 CANXP27824 592 aaKnown RBP10.09□□□□□ -0.79
LINC00559-201ENST00000569476 C20orf194Q5TEA3 1177 aa10.09□□□□□ -0.79
LINC00559-201ENST00000569476 TRIM35Q9UPQ4 493 aa10.09□□□□□ -0.79
LINC00559-201ENST00000569476 ARHGEF10O15013 1369 aa10.09□□□□□ -0.79
LINC00559-201ENST00000569476 COG3Q96JB2 828 aa10.09□□□□□ -0.79
LINC00559-201ENST00000569476 DNAJC5Q9H3Z4 198 aa10.09□□□□□ -0.79
LINC00559-201ENST00000569476 USP35Q9P2H5 1018 aa10.09□□□□□ -0.79
LINC00559-201ENST00000569476 POLKQ9UBT6 870 aa10.09□□□□□ -0.79
LINC00559-201ENST00000569476 ZBTB47Q9UFB7 747 aaPredicted RBP10.09□□□□□ -0.79
LINC00559-201ENST00000569476 NUTM2DQ5VT03 806 aaPredicted RBP10.09□□□□□ -0.79
LINC00559-201ENST00000569476 GGNBP2Q9H3C7 697 aa10.09□□□□□ -0.79
LINC00559-201ENST00000569476 MVPQ14764 893 aaKnown RBP10.08□□□□□ -0.8
LINC00559-201ENST00000569476 DDX19BQ9UMR2 479 aa10.08□□□□□ -0.8
LINC00559-201ENST00000569476 PHRF1Q9P1Y6 1649 aaKnown RBP10.08□□□□□ -0.8
LINC00559-201ENST00000569476 IL13P35225 146 aa10.08□□□□□ -0.8
LINC00559-201ENST00000569476 GNAI1P63096 354 aa10.08□□□□□ -0.8
LINC00559-201ENST00000569476 HDAC1Q13547 482 aaPredicted RBP10.08□□□□□ -0.8
LINC00559-201ENST00000569476 SOS1Q07889 1333 aaPredicted RBP10.08□□□□□ -0.8
LINC00559-201ENST00000569476 ROBO2Q9HCK4 1378 aa10.08□□□□□ -0.8
LINC00559-201ENST00000569476 THEMISQ8N1K5 641 aaPredicted RBP10.08□□□□□ -0.8
LINC00559-201ENST00000569476 PPM1GO15355 546 aaPredicted RBP10.07□□□□□ -0.8
LINC00559-201ENST00000569476 BCAR3O75815 825 aa10.07□□□□□ -0.8
LINC00559-201ENST00000569476 LRRC37A3O60309 1634 aa10.07□□□□□ -0.8
LINC00559-201ENST00000569476 LMTK3Q96Q04 1460 aa10.07□□□□□ -0.8
LINC00559-201ENST00000569476 DMRT2Q9Y5R5 561 aa10.07□□□□□ -0.8
LINC00559-201ENST00000569476 ZNF853P0CG23 659 aa10.07□□□□□ -0.8
LINC00559-201ENST00000569476 DZIP1LQ8IYY4 767 aaKnown RBP10.07□□□□□ -0.8
LINC00559-201ENST00000569476 RTL1A6NKG5 1358 aa10.06□□□□□ -0.8
LINC00559-201ENST00000569476 KIAA0232Q92628 1395 aa10.06□□□□□ -0.8
LINC00559-201ENST00000569476 ADAMTSL3P82987 1691 aa10.06□□□□□ -0.8
LINC00559-201ENST00000569476 DLG5Q8TDM6 1919 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms