RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CGNL1Q0VF96 1302 aa10.33□□□□□ -0.76
CDH13-214ENST00000569455 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
CDH13-214ENST00000569455 FMN2Q9NZ56 1722 aa10.32□□□□□ -0.76
CDH13-214ENST00000569455 TOPAZ1Q8N9V7 1692 aa10.31□□□□□ -0.76
CDH13-214ENST00000569455 A0A1W2PP64 1363 aa10.31□□□□□ -0.76
CDH13-214ENST00000569455 ANKRD26Q9UPS8 1709 aa10.31□□□□□ -0.76
CDH13-214ENST00000569455 NUDT16Q96DE0 195 aaKnown RBP10.31□□□□□ -0.76
CDH13-214ENST00000569455 CCDC61Q9Y6R9 512 aa10.31□□□□□ -0.76
CDH13-214ENST00000569455 AKAP12Q02952 1782 aa10.31□□□□□ -0.76
CDH13-214ENST00000569455 RGS12O14924 1447 aa10.31□□□□□ -0.76
CDH13-214ENST00000569455 PPIP5K1Q6PFW1 1433 aa10.31□□□□□ -0.76
CDH13-214ENST00000569455 KIF20BQ96Q89 1820 aa10.3□□□□□ -0.76
CDH13-214ENST00000569455 C1orf167Q5SNV9 1468 aa10.3□□□□□ -0.76
CDH13-214ENST00000569455 CABP1Q9NZU7 370 aa10.3□□□□□ -0.76
CDH13-214ENST00000569455 MON2Q7Z3U7 1717 aa10.3□□□□□ -0.76
CDH13-214ENST00000569455 CD163L1Q9NR16 1453 aa10.3□□□□□ -0.76
CDH13-214ENST00000569455 CCDC184Q52MB2 194 aa10.29□□□□□ -0.76
CDH13-214ENST00000569455 KIF1AQ12756 1690 aa10.28□□□□□ -0.76
CDH13-214ENST00000569455 PPP2R1AP30153 589 aa10.28□□□□□ -0.76
CDH13-214ENST00000569455 MORC1Q86VD1 984 aa10.28□□□□□ -0.76
CDH13-214ENST00000569455 FAM9BQ8IZU0 186 aa10.28□□□□□ -0.76
CDH13-214ENST00000569455 AHDC1Q5TGY3 1603 aaPredicted RBP10.28□□□□□ -0.76
CDH13-214ENST00000569455 CPSF1Q10570 1443 aaKnown RBP10.27□□□□□ -0.77
CDH13-214ENST00000569455 BRINP3Q76B58 766 aa10.27□□□□□ -0.77
CDH13-214ENST00000569455 ZNF692Q9BU19 519 aaPredicted RBP10.27□□□□□ -0.77
CDH13-214ENST00000569455 PRR36Q9H6K5 1346 aa10.27□□□□□ -0.77
CDH13-214ENST00000569455 RGPD8O14715 1765 aaPredicted RBP10.26□□□□□ -0.77
CDH13-214ENST00000569455 NHSL1Q5SYE7 1610 aa10.26□□□□□ -0.77
CDH13-214ENST00000569455 EDC4Q6P2E9 1401 aaKnown RBP10.26□□□□□ -0.77
CDH13-214ENST00000569455 PLEKHG3A1L390 1219 aa10.26□□□□□ -0.77
CDH13-214ENST00000569455 NUTM2BA6NNL0 878 aaPredicted RBP10.26□□□□□ -0.77
CDH13-214ENST00000569455 NUTM2EB1AL46 878 aaPredicted RBP10.26□□□□□ -0.77
CDH13-214ENST00000569455 NUTM2AQ8IVF1 878 aaPredicted RBP10.26□□□□□ -0.77
CDH13-214ENST00000569455 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
CDH13-214ENST00000569455 AFF2P51816 1311 aa10.26□□□□□ -0.77
CDH13-214ENST00000569455 NPHP3Q7Z494 1330 aa10.26□□□□□ -0.77
CDH13-214ENST00000569455 ESCO1Q5FWF5 840 aa10.25□□□□□ -0.77
CDH13-214ENST00000569455 RBM6P78332 1123 aaKnown RBP10.24□□□□□ -0.77
CDH13-214ENST00000569455 HNRNPUQ00839 825 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDH13-214ENST00000569455 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
CDH13-214ENST00000569455 INSRP06213 1382 aa10.24□□□□□ -0.77
CDH13-214ENST00000569455 LRP5O75197 1615 aa10.23□□□□□ -0.77
CDH13-214ENST00000569455 NUTM2FA1L443 756 aa10.23□□□□□ -0.77
CDH13-214ENST00000569455 FYB1O15117 783 aa10.23□□□□□ -0.77
CDH13-214ENST00000569455 PSME1Q06323 249 aa10.23□□□□□ -0.77
CDH13-214ENST00000569455 LRRC59Q96AG4 307 aaKnown RBP10.23□□□□□ -0.77
CDH13-214ENST00000569455 ORAI2Q96SN7 254 aa10.23□□□□□ -0.77
CDH13-214ENST00000569455 SOS2Q07890 1332 aaPredicted RBP10.23□□□□□ -0.77
CDH13-214ENST00000569455 NRKQ7Z2Y5 1582 aa10.22□□□□□ -0.77
CDH13-214ENST00000569455 WDR43Q15061 677 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDH13-214ENST00000569455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.22□□□□□ -0.77
CDH13-214ENST00000569455 CFAP53Q96M91 514 aa10.22□□□□□ -0.77
CDH13-214ENST00000569455 GGNBP2Q9H3C7 697 aa10.22□□□□□ -0.77
CDH13-214ENST00000569455 ACEP12821 1306 aa10.22□□□□□ -0.77
CDH13-214ENST00000569455 POLR3AO14802 1390 aaPredicted RBP10.22□□□□□ -0.77
CDH13-214ENST00000569455 USP6P35125 1406 aa10.22□□□□□ -0.77
CDH13-214ENST00000569455 NGDNQ8NEJ9 315 aaKnown RBP10.21□□□□□ -0.77
CDH13-214ENST00000569455 SBNO1A3KN83 1393 aa10.2□□□□□ -0.78
CDH13-214ENST00000569455 FOXO3O43524 673 aa10.2□□□□□ -0.78
CDH13-214ENST00000569455 TNNT2P45379 298 aaPredicted RBP10.2□□□□□ -0.78
CDH13-214ENST00000569455 TTC21AQ8NDW8 1320 aa10.2□□□□□ -0.78
CDH13-214ENST00000569455 PXDNQ92626 1479 aa10.2□□□□□ -0.78
CDH13-214ENST00000569455 NGLY1Q96IV0 654 aa10.2□□□□□ -0.78
CDH13-214ENST00000569455 QTRT2Q9H974 415 aaKnown RBP10.2□□□□□ -0.78
CDH13-214ENST00000569455 ZBED9Q6R2W3 1325 aa10.19□□□□□ -0.78
CDH13-214ENST00000569455 TTC21BQ7Z4L5 1316 aa10.19□□□□□ -0.78
CDH13-214ENST00000569455 PMFBP1Q8TBY8 1022 aa10.19□□□□□ -0.78
CDH13-214ENST00000569455 COG3Q96JB2 828 aa10.19□□□□□ -0.78
CDH13-214ENST00000569455 MAP2P11137 1827 aaKnown RBP10.19□□□□□ -0.78
CDH13-214ENST00000569455 MTHFSP49914 203 aa10.18□□□□□ -0.78
CDH13-214ENST00000569455 KRT28Q7Z3Y7 464 aa10.18□□□□□ -0.78
CDH13-214ENST00000569455 NME9Q86XW9 330 aa10.18□□□□□ -0.78
CDH13-214ENST00000569455 BLMP54132 1417 aaPredicted RBP10.17□□□□□ -0.78
CDH13-214ENST00000569455 SSH2Q76I76 1423 aa10.17□□□□□ -0.78
CDH13-214ENST00000569455 ARHGEF10O15013 1369 aa10.17□□□□□ -0.78
CDH13-214ENST00000569455 EP400Q96L91 3159 aa10.17□□□□□ -0.78
CDH13-214ENST00000569455 CCDC125Q86Z20 511 aa10.17□□□□□ -0.78
CDH13-214ENST00000569455 C8orf37Q96NL8 207 aa10.17□□□□□ -0.78
CDH13-214ENST00000569455 COL22A1Q8NFW1 1626 aaPredicted RBP10.17□□□□□ -0.78
CDH13-214ENST00000569455 AATKQ6ZMQ8 1374 aa10.16□□□□□ -0.78
CDH13-214ENST00000569455 SPATA31A3Q5VYP0 1347 aa10.16□□□□□ -0.78
CDH13-214ENST00000569455 TRPM3Q9HCF6 1732 aaPredicted RBP10.16□□□□□ -0.78
CDH13-214ENST00000569455 USP54Q70EL1 1684 aa10.15□□□□□ -0.78
CDH13-214ENST00000569455 ADAMTS8Q9UP79 889 aa10.15□□□□□ -0.78
CDH13-214ENST00000569455 NUDCQ9Y266 331 aa10.15□□□□□ -0.78
CDH13-214ENST00000569455 OVOS2A0A0J9YW53 1432 aa10.15□□□□□ -0.79
CDH13-214ENST00000569455 TNS3Q68CZ2 1445 aa10.15□□□□□ -0.79
CDH13-214ENST00000569455 OVOS2Q6IE36 1432 aa10.15□□□□□ -0.79
CDH13-214ENST00000569455 USP31Q70CQ4 1352 aa10.14□□□□□ -0.79
CDH13-214ENST00000569455 PIK3C2AO00443 1686 aa10.14□□□□□ -0.79
CDH13-214ENST00000569455 ALS2Q96Q42 1657 aa10.14□□□□□ -0.79
CDH13-214ENST00000569455 SMG6Q86US8 1419 aaKnown RBP10.14□□□□□ -0.79
CDH13-214ENST00000569455 PNPLA6Q8IY17 1366 aa10.14□□□□□ -0.79
CDH13-214ENST00000569455 DDX17Q92841 729 aaKnown RBP10.13□□□□□ -0.79
CDH13-214ENST00000569455 COL3A1P02461 1466 aaPredicted RBP10.12□□□□□ -0.79
CDH13-214ENST00000569455 DIAPH1O60610 1272 aaKnown RBP10.12□□□□□ -0.79
CDH13-214ENST00000569455 NGEFQ8N5V2 710 aa10.12□□□□□ -0.79
CDH13-214ENST00000569455 POLKQ9UBT6 870 aa10.12□□□□□ -0.79
CDH13-214ENST00000569455 PAK3O75914 559 aaPredicted RBP10.11□□□□□ -0.79
CDH13-214ENST00000569455 NLRP6P59044 892 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms