RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.41
TCF4-240ENST00000568673 AAMPQ13685 434 aa12.46□□□□□ -0.41
TCF4-240ENST00000568673 NPM2Q86SE8 214 aaKnown RBP12.46□□□□□ -0.41
TCF4-240ENST00000568673 PANK1Q8TE04 598 aa12.46□□□□□ -0.41
TCF4-240ENST00000568673 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
TCF4-240ENST00000568673 CLUAP1Q96AJ1 413 aa12.45□□□□□ -0.42
TCF4-240ENST00000568673 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
TCF4-240ENST00000568673 DIAPH1O60610 1272 aaKnown RBP12.45□□□□□ -0.42
TCF4-240ENST00000568673 TMPOP42166 694 aaKnown RBP12.45□□□□□ -0.42
TCF4-240ENST00000568673 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
TCF4-240ENST00000568673 ATP7BP35670 1465 aa12.45□□□□□ -0.42
TCF4-240ENST00000568673 CT47B1P0C2W7 299 aaPredicted RBP12.44□□□□□ -0.42
TCF4-240ENST00000568673 PNNQ9H307 717 aaKnown RBP12.44□□□□□ -0.42
TCF4-240ENST00000568673 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
TCF4-240ENST00000568673 IGHDP01880 384 aa12.44□□□□□ -0.42
TCF4-240ENST00000568673 KIF13AQ9H1H9 1805 aa12.44□□□□□ -0.42
TCF4-240ENST00000568673 WASLO00401 505 aaPredicted RBP12.43□□□□□ -0.42
TCF4-240ENST00000568673 SIRT1Q96EB6 747 aa12.43□□□□□ -0.42
TCF4-240ENST00000568673 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
TCF4-240ENST00000568673 METP08581 1390 aa12.43□□□□□ -0.42
TCF4-240ENST00000568673 NRXN3Q9Y4C0 1643 aa12.43□□□□□ -0.42
TCF4-240ENST00000568673 FAM161AQ3B820 660 aa12.43□□□□□ -0.42
TCF4-240ENST00000568673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.43□□□□□ -0.42
TCF4-240ENST00000568673 KIF20BQ96Q89 1820 aa12.43□□□□□ -0.42
TCF4-240ENST00000568673 IL16Q14005 1332 aa12.42□□□□□ -0.42
TCF4-240ENST00000568673 FCHSD2O94868 740 aa12.42□□□□□ -0.42
TCF4-240ENST00000568673 CPSF1Q10570 1443 aaKnown RBP12.41□□□□□ -0.42
TCF4-240ENST00000568673 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
TCF4-240ENST00000568673 POLKQ9UBT6 870 aa12.41□□□□□ -0.42
TCF4-240ENST00000568673 RLBP1P12271 317 aa12.41□□□□□ -0.42
TCF4-240ENST00000568673 RGS3P49796 1198 aa12.41□□□□□ -0.42
TCF4-240ENST00000568673 RIPK4P57078 832 aa12.41□□□□□ -0.42
TCF4-240ENST00000568673 C8orf34Q49A92 452 aa12.41□□□□□ -0.42
TCF4-240ENST00000568673 TXNDC2Q86VQ3 553 aa12.41□□□□□ -0.42
TCF4-240ENST00000568673 FAM135BQ49AJ0 1406 aa12.4□□□□□ -0.42
TCF4-240ENST00000568673 PMFBP1Q8TBY8 1022 aa12.4□□□□□ -0.42
TCF4-240ENST00000568673 TSR2Q969E8 191 aaKnown RBP12.4□□□□□ -0.42
TCF4-240ENST00000568673 TNRQ92752 1358 aa12.4□□□□□ -0.42
TCF4-240ENST00000568673 EDC4Q6P2E9 1401 aaKnown RBP12.4□□□□□ -0.42
TCF4-240ENST00000568673 TECPR2O15040 1411 aa12.39□□□□□ -0.43
TCF4-240ENST00000568673 PPIP5K1Q6PFW1 1433 aa12.39□□□□□ -0.43
TCF4-240ENST00000568673 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
TCF4-240ENST00000568673 NUDT16Q96DE0 195 aaKnown RBP12.39□□□□□ -0.43
TCF4-240ENST00000568673 CDC42BPGQ6DT37 1551 aa12.39□□□□□ -0.43
TCF4-240ENST00000568673 ZKSCAN2Q63HK3 967 aa12.38□□□□□ -0.43
TCF4-240ENST00000568673 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
TCF4-240ENST00000568673 TNNQ9UQP3 1299 aa12.38□□□□□ -0.43
TCF4-240ENST00000568673 CCDC61Q9Y6R9 512 aa12.38□□□□□ -0.43
TCF4-240ENST00000568673 TMEM2Q9UHN6 1383 aa12.38□□□□□ -0.43
TCF4-240ENST00000568673 FBLN1P23142 703 aa12.38□□□□□ -0.43
TCF4-240ENST00000568673 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
TCF4-240ENST00000568673 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
TCF4-240ENST00000568673 MVPQ14764 893 aaKnown RBP12.37□□□□□ -0.43
TCF4-240ENST00000568673 PCDHB15Q9Y5E8 787 aa12.37□□□□□ -0.43
TCF4-240ENST00000568673 KNDC1Q76NI1 1749 aa12.37□□□□□ -0.43
TCF4-240ENST00000568673 MAP2P11137 1827 aaKnown RBP12.37□□□□□ -0.43
TCF4-240ENST00000568673 NEFMP07197 916 aa12.36□□□□□ -0.43
TCF4-240ENST00000568673 DZIP1LQ8IYY4 767 aaKnown RBP12.36□□□□□ -0.43
TCF4-240ENST00000568673 SMC4Q9NTJ3 1288 aa12.36□□□□□ -0.43
TCF4-240ENST00000568673 AATKQ6ZMQ8 1374 aa12.36□□□□□ -0.43
TCF4-240ENST00000568673 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
TCF4-240ENST00000568673 NBR1Q14596 966 aa12.36□□□□□ -0.43
TCF4-240ENST00000568673 NME9Q86XW9 330 aa12.36□□□□□ -0.43
TCF4-240ENST00000568673 ZNF692Q9BU19 519 aaPredicted RBP12.36□□□□□ -0.43
TCF4-240ENST00000568673 FTSJ3Q8IY81 847 aaKnown RBP12.35□□□□□ -0.43
TCF4-240ENST00000568673 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
TCF4-240ENST00000568673 CPS1P31327 1500 aa12.35□□□□□ -0.43
TCF4-240ENST00000568673 RWDD1Q9H446 243 aaPredicted RBP12.35□□□□□ -0.43
TCF4-240ENST00000568673 EMILIN1Q9Y6C2 1016 aa12.35□□□□□ -0.43
TCF4-240ENST00000568673 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
TCF4-240ENST00000568673 LRRC7Q96NW7 1537 aa12.34□□□□□ -0.43
TCF4-240ENST00000568673 COG3Q96JB2 828 aa12.34□□□□□ -0.43
TCF4-240ENST00000568673 TRIM27P14373 513 aa12.34□□□□□ -0.43
TCF4-240ENST00000568673 IL13P35225 146 aa12.34□□□□□ -0.43
TCF4-240ENST00000568673 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
TCF4-240ENST00000568673 ATF7IPQ6VMQ6 1270 aa12.33□□□□□ -0.44
TCF4-240ENST00000568673 PHACTR3Q96KR7 559 aa12.33□□□□□ -0.44
TCF4-240ENST00000568673 ZRANB1Q9UGI0 708 aa12.33□□□□□ -0.44
TCF4-240ENST00000568673 NFE2L2Q16236 605 aa12.33□□□□□ -0.44
TCF4-240ENST00000568673 ROBO2Q9HCK4 1378 aa12.33□□□□□ -0.44
TCF4-240ENST00000568673 ADAMTS13Q76LX8 1427 aa12.33□□□□□ -0.44
TCF4-240ENST00000568673 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
TCF4-240ENST00000568673 HMOX1P09601 288 aa12.32□□□□□ -0.44
TCF4-240ENST00000568673 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
TCF4-240ENST00000568673 MON2Q7Z3U7 1717 aa12.32□□□□□ -0.44
TCF4-240ENST00000568673 ZNF428Q96B54 188 aa12.32□□□□□ -0.44
TCF4-240ENST00000568673 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
TCF4-240ENST00000568673 PRR36Q9H6K5 1346 aa12.32□□□□□ -0.44
TCF4-240ENST00000568673 CALD1Q05682 793 aaKnown RBP12.32□□□□□ -0.44
TCF4-240ENST00000568673 DDX19BQ9UMR2 479 aa12.32□□□□□ -0.44
TCF4-240ENST00000568673 PLEKHG1Q9ULL1 1385 aa12.31□□□□□ -0.44
TCF4-240ENST00000568673 IPO8O15397 1037 aaKnown RBP12.31□□□□□ -0.44
TCF4-240ENST00000568673 LTKP29376 864 aa12.31□□□□□ -0.44
TCF4-240ENST00000568673 KIF16BQ96L93 1317 aa12.31□□□□□ -0.44
TCF4-240ENST00000568673 AKAP12Q02952 1782 aa12.3□□□□□ -0.44
TCF4-240ENST00000568673 BRPF1P55201 1214 aaPredicted RBP12.3□□□□□ -0.44
TCF4-240ENST00000568673 PDZRN3Q9UPQ7 1066 aa12.3□□□□□ -0.44
TCF4-240ENST00000568673 C3P01024 1663 aa12.3□□□□□ -0.44
TCF4-240ENST00000568673 RRS1Q15050 365 aaKnown RBP12.29□□□□□ -0.44
TCF4-240ENST00000568673 RTL5Q5HYW3 569 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms