RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-223ENST00000568499 EDC4Q6P2E9 1401 aaKnown RBP20.48■□□□□ 0.87
KLHDC4-223ENST00000568499 ABTB2Q8N961 1025 aa20.47■□□□□ 0.87
KLHDC4-223ENST00000568499 CD163L1Q9NR16 1453 aa20.47■□□□□ 0.87
KLHDC4-223ENST00000568499 TTC21BQ7Z4L5 1316 aa20.47■□□□□ 0.87
KLHDC4-223ENST00000568499 JCADQ9P266 1359 aa20.46■□□□□ 0.87
KLHDC4-223ENST00000568499 TNS3Q68CZ2 1445 aa20.46■□□□□ 0.87
KLHDC4-223ENST00000568499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.46■□□□□ 0.87
KLHDC4-223ENST00000568499 KNSTRNQ9Y448 316 aa20.45■□□□□ 0.86
KLHDC4-223ENST00000568499 COL16A1Q07092 1604 aaPredicted RBP20.44■□□□□ 0.86
KLHDC4-223ENST00000568499 MYOM1P52179 1685 aa20.43■□□□□ 0.86
KLHDC4-223ENST00000568499 ILDR1Q86SU0 546 aaPredicted RBP20.43■□□□□ 0.86
KLHDC4-223ENST00000568499 NLRP13Q86W25 1043 aa20.43■□□□□ 0.86
KLHDC4-223ENST00000568499 CGNL1Q0VF96 1302 aa20.43■□□□□ 0.86
KLHDC4-223ENST00000568499 AKAP12Q02952 1782 aa20.43■□□□□ 0.86
KLHDC4-223ENST00000568499 SSH2Q76I76 1423 aa20.43■□□□□ 0.86
KLHDC4-223ENST00000568499 NLRP6P59044 892 aa20.42■□□□□ 0.86
KLHDC4-223ENST00000568499 CARD14Q9BXL6 1004 aa20.42■□□□□ 0.86
KLHDC4-223ENST00000568499 NSD3Q9BZ95 1437 aa20.42■□□□□ 0.86
KLHDC4-223ENST00000568499 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
KLHDC4-223ENST00000568499 MON2Q7Z3U7 1717 aa20.4■□□□□ 0.86
KLHDC4-223ENST00000568499 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
KLHDC4-223ENST00000568499 SPATA31A6Q5VVP1 1343 aa20.39■□□□□ 0.85
KLHDC4-223ENST00000568499 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.85
KLHDC4-223ENST00000568499 NUTM2GQ5VZR2 741 aa20.39■□□□□ 0.85
KLHDC4-223ENST00000568499 TRPM3Q9HCF6 1732 aaPredicted RBP20.39■□□□□ 0.85
KLHDC4-223ENST00000568499 NME9Q86XW9 330 aa20.38■□□□□ 0.85
KLHDC4-223ENST00000568499 COG3Q96JB2 828 aa20.38■□□□□ 0.85
KLHDC4-223ENST00000568499 PLEKHG5O94827 1062 aa20.36■□□□□ 0.85
KLHDC4-223ENST00000568499 FYB1O15117 783 aa20.35■□□□□ 0.85
KLHDC4-223ENST00000568499 KCNH5Q8NCM2 988 aa20.35■□□□□ 0.85
KLHDC4-223ENST00000568499 NSD2O96028 1365 aa20.34■□□□□ 0.85
KLHDC4-223ENST00000568499 USP31Q70CQ4 1352 aa20.34■□□□□ 0.85
KLHDC4-223ENST00000568499 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
KLHDC4-223ENST00000568499 NUTM2BA6NNL0 878 aaPredicted RBP20.34■□□□□ 0.85
KLHDC4-223ENST00000568499 NUTM2EB1AL46 878 aaPredicted RBP20.34■□□□□ 0.85
KLHDC4-223ENST00000568499 NUTM2AQ8IVF1 878 aaPredicted RBP20.34■□□□□ 0.85
KLHDC4-223ENST00000568499 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
KLHDC4-223ENST00000568499 ALS2Q96Q42 1657 aa20.34■□□□□ 0.85
KLHDC4-223ENST00000568499 SHPRHQ149N8 1683 aa20.33■□□□□ 0.85
KLHDC4-223ENST00000568499 PER1O15534 1290 aaPredicted RBP20.33■□□□□ 0.85
KLHDC4-223ENST00000568499 CABLES1Q8TDN4 633 aa20.32■□□□□ 0.84
KLHDC4-223ENST00000568499 USP19O94966 1318 aa20.31■□□□□ 0.84
KLHDC4-223ENST00000568499 MEX3CQ5U5Q3 659 aaKnown RBP20.31■□□□□ 0.84
KLHDC4-223ENST00000568499 COL22A1Q8NFW1 1626 aaPredicted RBP20.31■□□□□ 0.84
KLHDC4-223ENST00000568499 GCP02774 474 aa20.3■□□□□ 0.84
KLHDC4-223ENST00000568499 ZRANB1Q9UGI0 708 aa20.3■□□□□ 0.84
KLHDC4-223ENST00000568499 PIK3C2AO00443 1686 aa20.29■□□□□ 0.84
KLHDC4-223ENST00000568499 AMER1Q5JTC6 1135 aaPredicted RBP20.29■□□□□ 0.84
KLHDC4-223ENST00000568499 MORC1Q86VD1 984 aa20.29■□□□□ 0.84
KLHDC4-223ENST00000568499 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
KLHDC4-223ENST00000568499 ADAMTS2O95450 1211 aa20.28■□□□□ 0.84
KLHDC4-223ENST00000568499 NPC1L1Q9UHC9 1359 aa20.28■□□□□ 0.84
KLHDC4-223ENST00000568499 OVOS2A0A0J9YW53 1432 aa20.27■□□□□ 0.84
KLHDC4-223ENST00000568499 OVOS2Q6IE36 1432 aa20.27■□□□□ 0.84
KLHDC4-223ENST00000568499 SOX12O15370 315 aa20.27■□□□□ 0.84
KLHDC4-223ENST00000568499 CC2D1BQ5T0F9 858 aaKnown RBP20.27■□□□□ 0.84
KLHDC4-223ENST00000568499 ZC3H6P61129 1189 aaKnown RBP20.25■□□□□ 0.83
KLHDC4-223ENST00000568499 PRDM11Q9NQV5 511 aa20.25■□□□□ 0.83
KLHDC4-223ENST00000568499 KIF20BQ96Q89 1820 aa20.25■□□□□ 0.83
KLHDC4-223ENST00000568499 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
KLHDC4-223ENST00000568499 SLIT3O75094 1523 aa20.23■□□□□ 0.83
KLHDC4-223ENST00000568499 ZBTB7CA1YPR0 619 aa20.23■□□□□ 0.83
KLHDC4-223ENST00000568499 NGLY1Q96IV0 654 aa20.22■□□□□ 0.83
KLHDC4-223ENST00000568499 USP54Q70EL1 1684 aa20.22■□□□□ 0.83
KLHDC4-223ENST00000568499 CPDO75976 1380 aa20.21■□□□□ 0.83
KLHDC4-223ENST00000568499 TNNT2P45379 298 aaPredicted RBP20.21■□□□□ 0.83
KLHDC4-223ENST00000568499 C8orf37Q96NL8 207 aa20.21■□□□□ 0.83
KLHDC4-223ENST00000568499 KIAA0232Q92628 1395 aa20.21■□□□□ 0.83
KLHDC4-223ENST00000568499 ARHGEF25Q86VW2 580 aa20.2■□□□□ 0.82
KLHDC4-223ENST00000568499 PHRF1Q9P1Y6 1649 aaKnown RBP20.2■□□□□ 0.82
KLHDC4-223ENST00000568499 AMPHP49418 695 aa20.19■□□□□ 0.82
KLHDC4-223ENST00000568499 AATKQ6ZMQ8 1374 aa20.19■□□□□ 0.82
KLHDC4-223ENST00000568499 LRP6O75581 1613 aa20.18■□□□□ 0.82
KLHDC4-223ENST00000568499 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
KLHDC4-223ENST00000568499 RALBP1Q15311 655 aa20.17■□□□□ 0.82
KLHDC4-223ENST00000568499 ABCA3Q99758 1704 aa20.16■□□□□ 0.82
KLHDC4-223ENST00000568499 CRYBG1Q9Y4K1 1723 aa20.16■□□□□ 0.82
KLHDC4-223ENST00000568499 CHRNA2Q15822 529 aa20.16■□□□□ 0.82
KLHDC4-223ENST00000568499 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
KLHDC4-223ENST00000568499 NFAT5O94916 1531 aa20.16■□□□□ 0.82
KLHDC4-223ENST00000568499 ANKRD26Q9UPS8 1709 aa20.16■□□□□ 0.82
KLHDC4-223ENST00000568499 PPM1GO15355 546 aaPredicted RBP20.15■□□□□ 0.82
KLHDC4-223ENST00000568499 RRS1Q15050 365 aaKnown RBP20.15■□□□□ 0.82
KLHDC4-223ENST00000568499 MAP3K19Q56UN5 1328 aa20.15■□□□□ 0.82
KLHDC4-223ENST00000568499 KIF24Q5T7B8 1368 aa20.15■□□□□ 0.82
KLHDC4-223ENST00000568499 MARF1Q9Y4F3 1742 aaKnown RBP20.14■□□□□ 0.81
KLHDC4-223ENST00000568499 ANP32CO43423 234 aa20.14■□□□□ 0.81
KLHDC4-223ENST00000568499 EVA1CP58658 441 aa20.14■□□□□ 0.81
KLHDC4-223ENST00000568499 BTG4Q9NY30 223 aa20.14■□□□□ 0.81
KLHDC4-223ENST00000568499 FBLN1P23142 703 aa20.13■□□□□ 0.81
KLHDC4-223ENST00000568499 FNBP4Q8N3X1 1017 aaPredicted RBP20.13■□□□□ 0.81
KLHDC4-223ENST00000568499 IP6K1Q92551 441 aa20.13■□□□□ 0.81
KLHDC4-223ENST00000568499 POLKQ9UBT6 870 aa20.13■□□□□ 0.81
KLHDC4-223ENST00000568499 RTL1A6NKG5 1358 aa20.12■□□□□ 0.81
KLHDC4-223ENST00000568499 AFF2P51816 1311 aa20.12■□□□□ 0.81
KLHDC4-223ENST00000568499 ZNF772Q68DY9 489 aaPredicted RBP20.12■□□□□ 0.81
KLHDC4-223ENST00000568499 USP21Q9UK80 565 aa20.12■□□□□ 0.81
KLHDC4-223ENST00000568499 COL14A1Q05707 1796 aaKnown RBP20.11■□□□□ 0.81
KLHDC4-223ENST00000568499 FLT4P35916 1363 aa20.11■□□□□ 0.81
KLHDC4-223ENST00000568499 UNC5CLQ8IV45 518 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms