RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 ATAD2Q6PL18 1390 aa18.25■□□□□ 0.51
CNOT1-213ENST00000568158 COL22A1Q8NFW1 1626 aaPredicted RBP18.24■□□□□ 0.51
CNOT1-213ENST00000568158 HSPA5P11021 654 aaKnown RBP18.24■□□□□ 0.51
CNOT1-213ENST00000568158 TMF1P82094 1093 aa18.24■□□□□ 0.51
CNOT1-213ENST00000568158 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
CNOT1-213ENST00000568158 POTEAQ6S8J7 498 aa18.24■□□□□ 0.51
CNOT1-213ENST00000568158 NGLY1Q96IV0 654 aa18.24■□□□□ 0.51
CNOT1-213ENST00000568158 PUS7Q96PZ0 661 aaKnown RBP18.24■□□□□ 0.51
CNOT1-213ENST00000568158 ARHGEF10O15013 1369 aa18.23■□□□□ 0.51
CNOT1-213ENST00000568158 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
CNOT1-213ENST00000568158 EIF4G2P78344 907 aaKnown RBP eCLIP18.23■□□□□ 0.51
CNOT1-213ENST00000568158 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
CNOT1-213ENST00000568158 ABTB2Q8N961 1025 aa18.22■□□□□ 0.51
CNOT1-213ENST00000568158 AFF2P51816 1311 aa18.22■□□□□ 0.51
CNOT1-213ENST00000568158 ALS2Q96Q42 1657 aa18.2■□□□□ 0.5
CNOT1-213ENST00000568158 USP6P35125 1406 aa18.19■□□□□ 0.5
CNOT1-213ENST00000568158 ZNF772Q68DY9 489 aaPredicted RBP18.18■□□□□ 0.5
CNOT1-213ENST00000568158 TTC21BQ7Z4L5 1316 aa18.18■□□□□ 0.5
CNOT1-213ENST00000568158 KTN1Q86UP2 1357 aaKnown RBP18.17■□□□□ 0.5
CNOT1-213ENST00000568158 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
CNOT1-213ENST00000568158 FAM83GA6ND36 823 aa18.17■□□□□ 0.5
CNOT1-213ENST00000568158 CACNB1Q02641 598 aaPredicted RBP18.17■□□□□ 0.5
CNOT1-213ENST00000568158 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
CNOT1-213ENST00000568158 SSH2Q76I76 1423 aa18.16■□□□□ 0.5
CNOT1-213ENST00000568158 NLRP6P59044 892 aa18.16■□□□□ 0.5
CNOT1-213ENST00000568158 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
CNOT1-213ENST00000568158 NLRP13Q86W25 1043 aa18.16■□□□□ 0.5
CNOT1-213ENST00000568158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.16■□□□□ 0.5
CNOT1-213ENST00000568158 FNBP4Q8N3X1 1017 aaPredicted RBP18.16■□□□□ 0.5
CNOT1-213ENST00000568158 QTRT2Q9H974 415 aaKnown RBP18.16■□□□□ 0.5
CNOT1-213ENST00000568158 USP21Q9UK80 565 aa18.16■□□□□ 0.5
CNOT1-213ENST00000568158 CD163L1Q9NR16 1453 aa18.15■□□□□ 0.5
CNOT1-213ENST00000568158 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
CNOT1-213ENST00000568158 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
CNOT1-213ENST00000568158 BRD4O60885 1362 aaPredicted RBP18.15■□□□□ 0.5
CNOT1-213ENST00000568158 AKAP12Q02952 1782 aa18.14■□□□□ 0.5
CNOT1-213ENST00000568158 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
CNOT1-213ENST00000568158 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.49
CNOT1-213ENST00000568158 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
CNOT1-213ENST00000568158 C11orf95C9JLR9 678 aaPredicted RBP18.13■□□□□ 0.49
CNOT1-213ENST00000568158 GCP02774 474 aa18.11■□□□□ 0.49
CNOT1-213ENST00000568158 NME9Q86XW9 330 aa18.11■□□□□ 0.49
CNOT1-213ENST00000568158 TTC21AQ8NDW8 1320 aa18.11■□□□□ 0.49
CNOT1-213ENST00000568158 A0A1W2PP64 1363 aa18.11■□□□□ 0.49
CNOT1-213ENST00000568158 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
CNOT1-213ENST00000568158 CHRNA2Q15822 529 aa18.1■□□□□ 0.49
CNOT1-213ENST00000568158 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
CNOT1-213ENST00000568158 USP19O94966 1318 aa18.09■□□□□ 0.49
CNOT1-213ENST00000568158 RXRBP28702 533 aa18.09■□□□□ 0.49
CNOT1-213ENST00000568158 UNC5CLQ8IV45 518 aa18.09■□□□□ 0.49
CNOT1-213ENST00000568158 CRYBG1Q9Y4K1 1723 aa18.09■□□□□ 0.49
CNOT1-213ENST00000568158 NINLQ9Y2I6 1382 aa18.08■□□□□ 0.49
CNOT1-213ENST00000568158 PRDM11Q9NQV5 511 aa18.08■□□□□ 0.48
CNOT1-213ENST00000568158 TRPC5Q9UL62 973 aaPredicted RBP18.08■□□□□ 0.48
CNOT1-213ENST00000568158 MON2Q7Z3U7 1717 aa18.08■□□□□ 0.48
CNOT1-213ENST00000568158 KIAA0232Q92628 1395 aa18.07■□□□□ 0.48
CNOT1-213ENST00000568158 ZBTB7CA1YPR0 619 aa18.07■□□□□ 0.48
CNOT1-213ENST00000568158 SOX12O15370 315 aa18.07■□□□□ 0.48
CNOT1-213ENST00000568158 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
CNOT1-213ENST00000568158 SLIT2O94813 1529 aa18.07■□□□□ 0.48
CNOT1-213ENST00000568158 PIK3C2AO00443 1686 aa18.06■□□□□ 0.48
CNOT1-213ENST00000568158 RBM6P78332 1123 aaKnown RBP18.06■□□□□ 0.48
CNOT1-213ENST00000568158 CARD14Q9BXL6 1004 aa18.06■□□□□ 0.48
CNOT1-213ENST00000568158 EDC4Q6P2E9 1401 aaKnown RBP18.06■□□□□ 0.48
CNOT1-213ENST00000568158 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
CNOT1-213ENST00000568158 PHRF1Q9P1Y6 1649 aaKnown RBP18.05■□□□□ 0.48
CNOT1-213ENST00000568158 NRKQ7Z2Y5 1582 aa18.04■□□□□ 0.48
CNOT1-213ENST00000568158 GJD4Q96KN9 370 aaPredicted RBP18.03■□□□□ 0.48
CNOT1-213ENST00000568158 ATRNO75882 1429 aa18.03■□□□□ 0.48
CNOT1-213ENST00000568158 USP31Q70CQ4 1352 aa18.03■□□□□ 0.48
CNOT1-213ENST00000568158 FYB1O15117 783 aa18.02■□□□□ 0.48
CNOT1-213ENST00000568158 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
CNOT1-213ENST00000568158 CCDC9Q9Y3X0 531 aaKnown RBP18.02■□□□□ 0.48
CNOT1-213ENST00000568158 VPS72Q15906 364 aa18.01■□□□□ 0.47
CNOT1-213ENST00000568158 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
CNOT1-213ENST00000568158 STRN4Q9NRL3 753 aa18.01■□□□□ 0.47
CNOT1-213ENST00000568158 PLCH1Q4KWH8 1693 aa18.01■□□□□ 0.47
CNOT1-213ENST00000568158 COL14A1Q05707 1796 aaKnown RBP18.01■□□□□ 0.47
CNOT1-213ENST00000568158 SLIT3O75094 1523 aa18■□□□□ 0.47
CNOT1-213ENST00000568158 FBLN1P23142 703 aa18■□□□□ 0.47
CNOT1-213ENST00000568158 EVA1CP58658 441 aa18■□□□□ 0.47
CNOT1-213ENST00000568158 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
CNOT1-213ENST00000568158 PANK3Q9H999 370 aa18■□□□□ 0.47
CNOT1-213ENST00000568158 CPDO75976 1380 aa18■□□□□ 0.47
CNOT1-213ENST00000568158 MYOM1P52179 1685 aa17.99■□□□□ 0.47
CNOT1-213ENST00000568158 KIF7Q2M1P5 1343 aa17.99■□□□□ 0.47
CNOT1-213ENST00000568158 SOCS7O14512 581 aa17.98■□□□□ 0.47
CNOT1-213ENST00000568158 COG3Q96JB2 828 aa17.98■□□□□ 0.47
CNOT1-213ENST00000568158 AXIN2Q9Y2T1 843 aa17.98■□□□□ 0.47
CNOT1-213ENST00000568158 NWD2Q9ULI1 1742 aa17.98■□□□□ 0.47
CNOT1-213ENST00000568158 CAMTA1Q9Y6Y1 1673 aa17.97■□□□□ 0.47
CNOT1-213ENST00000568158 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.96■□□□□ 0.47
CNOT1-213ENST00000568158 NSD3Q9BZ95 1437 aa17.96■□□□□ 0.47
CNOT1-213ENST00000568158 LARP1Q6PKG0 1096 aaKnown RBP17.95■□□□□ 0.46
CNOT1-213ENST00000568158 NRAPQ86VF7 1730 aa17.95■□□□□ 0.46
CNOT1-213ENST00000568158 AATKQ6ZMQ8 1374 aa17.94■□□□□ 0.46
CNOT1-213ENST00000568158 OVOS2A0A0J9YW53 1432 aa17.94■□□□□ 0.46
CNOT1-213ENST00000568158 OVOS2Q6IE36 1432 aa17.94■□□□□ 0.46
CNOT1-213ENST00000568158 SPATA31A5Q5VU36 1347 aa17.94■□□□□ 0.46
CNOT1-213ENST00000568158 SPATA31A7Q8IWB4 1347 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms