RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 PSME1Q06323 249 aa22.87■■□□□ 1.25
SCAMP2-208ENST00000566557 SOS2Q07890 1332 aaPredicted RBP22.86■■□□□ 1.25
SCAMP2-208ENST00000566557 KRT28Q7Z3Y7 464 aa22.86■■□□□ 1.25
SCAMP2-208ENST00000566557 CABP1Q9NZU7 370 aa22.84■■□□□ 1.25
SCAMP2-208ENST00000566557 ACEP12821 1306 aa22.83■■□□□ 1.25
SCAMP2-208ENST00000566557 TRPM3Q9HCF6 1732 aaPredicted RBP22.83■■□□□ 1.25
SCAMP2-208ENST00000566557 TMC1Q8TDI8 760 aa22.83■■□□□ 1.25
SCAMP2-208ENST00000566557 POLR3AO14802 1390 aaPredicted RBP22.81■■□□□ 1.24
SCAMP2-208ENST00000566557 PLEKHG3A1L390 1219 aa22.81■■□□□ 1.24
SCAMP2-208ENST00000566557 LMOD2Q6P5Q4 547 aa22.81■■□□□ 1.24
SCAMP2-208ENST00000566557 POLR3GLQ9BT43 218 aa22.81■■□□□ 1.24
SCAMP2-208ENST00000566557 TNS3Q68CZ2 1445 aa22.81■■□□□ 1.24
SCAMP2-208ENST00000566557 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
SCAMP2-208ENST00000566557 CDCA8Q53HL2 280 aa22.8■■□□□ 1.24
SCAMP2-208ENST00000566557 ATRNO75882 1429 aa22.8■■□□□ 1.24
SCAMP2-208ENST00000566557 PAK3O75914 559 aaPredicted RBP22.79■■□□□ 1.24
SCAMP2-208ENST00000566557 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
SCAMP2-208ENST00000566557 SBNO1A3KN83 1393 aa22.77■■□□□ 1.24
SCAMP2-208ENST00000566557 PLEKHG5O94827 1062 aa22.77■■□□□ 1.24
SCAMP2-208ENST00000566557 ALS2Q96Q42 1657 aa22.77■■□□□ 1.24
SCAMP2-208ENST00000566557 SPATA31A3Q5VYP0 1347 aa22.77■■□□□ 1.24
SCAMP2-208ENST00000566557 COL22A1Q8NFW1 1626 aaPredicted RBP22.76■■□□□ 1.23
SCAMP2-208ENST00000566557 GJD4Q96KN9 370 aaPredicted RBP22.76■■□□□ 1.23
SCAMP2-208ENST00000566557 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
SCAMP2-208ENST00000566557 MYOM1P52179 1685 aa22.76■■□□□ 1.23
SCAMP2-208ENST00000566557 MON2Q7Z3U7 1717 aa22.76■■□□□ 1.23
SCAMP2-208ENST00000566557 USP6P35125 1406 aa22.75■■□□□ 1.23
SCAMP2-208ENST00000566557 SLC12A5Q9H2X9 1139 aa22.74■■□□□ 1.23
SCAMP2-208ENST00000566557 ARHGEF10O15013 1369 aa22.74■■□□□ 1.23
SCAMP2-208ENST00000566557 KTN1Q86UP2 1357 aaKnown RBP22.74■■□□□ 1.23
SCAMP2-208ENST00000566557 NINLQ9Y2I6 1382 aa22.74■■□□□ 1.23
SCAMP2-208ENST00000566557 NRKQ7Z2Y5 1582 aa22.73■■□□□ 1.23
SCAMP2-208ENST00000566557 HDGFL2Q7Z4V5 671 aaPredicted RBP22.73■■□□□ 1.23
SCAMP2-208ENST00000566557 BCL9LQ86UU0 1499 aa22.72■■□□□ 1.23
SCAMP2-208ENST00000566557 CD163L1Q9NR16 1453 aa22.72■■□□□ 1.23
SCAMP2-208ENST00000566557 ABCA3Q99758 1704 aa22.71■■□□□ 1.23
SCAMP2-208ENST00000566557 TERF2IPQ9NYB0 399 aa22.71■■□□□ 1.23
SCAMP2-208ENST00000566557 CPSF1Q10570 1443 aaKnown RBP22.71■■□□□ 1.23
SCAMP2-208ENST00000566557 HAP1P54257 671 aaPredicted RBP22.7■■□□□ 1.22
SCAMP2-208ENST00000566557 DEFB132Q7Z7B7 95 aa22.7■■□□□ 1.22
SCAMP2-208ENST00000566557 A0A1W2PP64 1363 aa22.7■■□□□ 1.22
SCAMP2-208ENST00000566557 ZNF692Q9BU19 519 aaPredicted RBP22.69■■□□□ 1.22
SCAMP2-208ENST00000566557 NUTM2GQ5VZR2 741 aa22.68■■□□□ 1.22
SCAMP2-208ENST00000566557 BRD4O60885 1362 aaPredicted RBP22.67■■□□□ 1.22
SCAMP2-208ENST00000566557 ANKRD36BQ8N2N9 1353 aa22.67■■□□□ 1.22
SCAMP2-208ENST00000566557 SF3B2Q13435 895 aaKnown RBP22.67■■□□□ 1.22
SCAMP2-208ENST00000566557 PIK3C2AO00443 1686 aa22.67■■□□□ 1.22
SCAMP2-208ENST00000566557 BLMP54132 1417 aaPredicted RBP22.66■■□□□ 1.22
SCAMP2-208ENST00000566557 ABTB2Q8N961 1025 aa22.66■■□□□ 1.22
SCAMP2-208ENST00000566557 PHRF1Q9P1Y6 1649 aaKnown RBP22.66■■□□□ 1.22
SCAMP2-208ENST00000566557 C11orf95C9JLR9 678 aaPredicted RBP22.65■■□□□ 1.22
SCAMP2-208ENST00000566557 CABLES1Q8TDN4 633 aa22.65■■□□□ 1.22
SCAMP2-208ENST00000566557 CRYBG1Q9Y4K1 1723 aa22.65■■□□□ 1.22
SCAMP2-208ENST00000566557 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
SCAMP2-208ENST00000566557 TTC21BQ7Z4L5 1316 aa22.64■■□□□ 1.22
SCAMP2-208ENST00000566557 UNC5CLQ8IV45 518 aa22.64■■□□□ 1.21
SCAMP2-208ENST00000566557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.64■■□□□ 1.21
SCAMP2-208ENST00000566557 MARF1Q9Y4F3 1742 aaKnown RBP22.64■■□□□ 1.21
SCAMP2-208ENST00000566557 SSH2Q76I76 1423 aa22.64■■□□□ 1.21
SCAMP2-208ENST00000566557 KIF7Q2M1P5 1343 aa22.63■■□□□ 1.21
SCAMP2-208ENST00000566557 TTC21AQ8NDW8 1320 aa22.62■■□□□ 1.21
SCAMP2-208ENST00000566557 NLRP6P59044 892 aa22.59■■□□□ 1.21
SCAMP2-208ENST00000566557 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
SCAMP2-208ENST00000566557 SEPT12Q8IYM1 358 aa22.59■■□□□ 1.21
SCAMP2-208ENST00000566557 KIF20BQ96Q89 1820 aa22.59■■□□□ 1.21
SCAMP2-208ENST00000566557 CCDC7Q96M83 1385 aa22.58■■□□□ 1.21
SCAMP2-208ENST00000566557 NSD3Q9BZ95 1437 aa22.57■■□□□ 1.2
SCAMP2-208ENST00000566557 NME9Q86XW9 330 aa22.57■■□□□ 1.2
SCAMP2-208ENST00000566557 PSDA5PKW4 1024 aaPredicted RBP22.56■■□□□ 1.2
SCAMP2-208ENST00000566557 USP19O94966 1318 aa22.55■■□□□ 1.2
SCAMP2-208ENST00000566557 SLIT3O75094 1523 aa22.54■■□□□ 1.2
SCAMP2-208ENST00000566557 PLCH1Q4KWH8 1693 aa22.54■■□□□ 1.2
SCAMP2-208ENST00000566557 USP54Q70EL1 1684 aa22.54■■□□□ 1.2
SCAMP2-208ENST00000566557 WASHC2AQ641Q2 1341 aa22.54■■□□□ 1.2
SCAMP2-208ENST00000566557 SOX12O15370 315 aa22.53■■□□□ 1.2
SCAMP2-208ENST00000566557 ZBTB7CA1YPR0 619 aa22.52■■□□□ 1.2
SCAMP2-208ENST00000566557 KRT27Q7Z3Y8 459 aa22.52■■□□□ 1.2
SCAMP2-208ENST00000566557 PANK3Q9H999 370 aa22.52■■□□□ 1.2
SCAMP2-208ENST00000566557 CCDC9Q9Y3X0 531 aaKnown RBP22.52■■□□□ 1.2
SCAMP2-208ENST00000566557 SLIT2O94813 1529 aa22.52■■□□□ 1.19
SCAMP2-208ENST00000566557 ZC3H6P61129 1189 aaKnown RBP22.51■■□□□ 1.19
SCAMP2-208ENST00000566557 GLI3P10071 1580 aa22.5■■□□□ 1.19
SCAMP2-208ENST00000566557 VPS72Q15906 364 aa22.5■■□□□ 1.19
SCAMP2-208ENST00000566557 CARD14Q9BXL6 1004 aa22.5■■□□□ 1.19
SCAMP2-208ENST00000566557 COL14A1Q05707 1796 aaKnown RBP22.5■■□□□ 1.19
SCAMP2-208ENST00000566557 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
SCAMP2-208ENST00000566557 OVOS2A0A0J9YW53 1432 aa22.49■■□□□ 1.19
SCAMP2-208ENST00000566557 OVOS2Q6IE36 1432 aa22.49■■□□□ 1.19
SCAMP2-208ENST00000566557 ONECUT3O60422 494 aaPredicted RBP22.49■■□□□ 1.19
SCAMP2-208ENST00000566557 BAG6P46379 1132 aa22.49■■□□□ 1.19
SCAMP2-208ENST00000566557 PRDM11Q9NQV5 511 aa22.49■■□□□ 1.19
SCAMP2-208ENST00000566557 KIAA0232Q92628 1395 aa22.49■■□□□ 1.19
SCAMP2-208ENST00000566557 GCP02774 474 aa22.48■■□□□ 1.19
SCAMP2-208ENST00000566557 COG3Q96JB2 828 aa22.48■■□□□ 1.19
SCAMP2-208ENST00000566557 GGNBP2Q9H3C7 697 aa22.48■■□□□ 1.19
SCAMP2-208ENST00000566557 A0A0G2JS52 829 aa22.46■■□□□ 1.19
SCAMP2-208ENST00000566557 MYT1Q01538 1121 aa22.46■■□□□ 1.19
SCAMP2-208ENST00000566557 KCNH5Q8NCM2 988 aa22.46■■□□□ 1.19
SCAMP2-208ENST00000566557 CGNL1Q0VF96 1302 aa22.46■■□□□ 1.19
SCAMP2-208ENST00000566557 NFAT5O94916 1531 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms