RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 FOXD4L5Q5VV16 416 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 RNF19BQ6ZMZ0 732 aa5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 FOXD4L4Q8WXT5 416 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 USB1Q9BQ65 265 aaKnown RBP5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 TRAIPQ9BWF2 469 aa5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 ATP1B4Q9UN42 357 aaPredicted RBP5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 MTMR7Q9Y216 660 aa5.45□□□□□ -1.54
HERPUD1-211ENST00000566550 LOC105371045A0A1W2PR82 267 aa5.44□□□□□ -1.54
HERPUD1-211ENST00000566550 H3BM21 787 aa5.44□□□□□ -1.54
HERPUD1-211ENST00000566550 GNPATO15228 680 aa5.44□□□□□ -1.54
HERPUD1-211ENST00000566550 PROSER2Q86WR7 435 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-211ENST00000566550 PCMTD1Q96MG8 357 aaPredicted RBP5.44□□□□□ -1.54
HERPUD1-211ENST00000566550 DXOO77932 396 aaKnown RBP5.43□□□□□ -1.54
HERPUD1-211ENST00000566550 MCM6Q14566 821 aa5.43□□□□□ -1.54
HERPUD1-211ENST00000566550 GZF1Q9H116 711 aaPredicted RBP5.43□□□□□ -1.54
HERPUD1-211ENST00000566550 GPR37O15354 613 aa5.42□□□□□ -1.54
HERPUD1-211ENST00000566550 MFAP1P55081 439 aaKnown RBP5.42□□□□□ -1.54
HERPUD1-211ENST00000566550 RETREG2Q8NC44 543 aa5.42□□□□□ -1.54
HERPUD1-211ENST00000566550 EHBP1Q8NDI1 1231 aa5.42□□□□□ -1.54
HERPUD1-211ENST00000566550 ZNF428Q96B54 188 aa5.42□□□□□ -1.54
HERPUD1-211ENST00000566550 IGSF3O75054 1194 aa5.41□□□□□ -1.54
HERPUD1-211ENST00000566550 VEGFBP49765 207 aa5.41□□□□□ -1.54
HERPUD1-211ENST00000566550 MAP2K5Q13163 448 aa5.41□□□□□ -1.54
HERPUD1-211ENST00000566550 SCARF1Q14162 830 aa5.41□□□□□ -1.54
HERPUD1-211ENST00000566550 RGS22Q8NE09 1264 aa5.41□□□□□ -1.54
HERPUD1-211ENST00000566550 POM121Q96HA1 1249 aa5.41□□□□□ -1.54
HERPUD1-211ENST00000566550 SERPINA10Q9UK55 444 aa5.41□□□□□ -1.54
HERPUD1-211ENST00000566550 MINK1Q8N4C8 1332 aaPredicted RBP5.41□□□□□ -1.54
HERPUD1-211ENST00000566550 BMP1P13497 986 aa5.4□□□□□ -1.54
HERPUD1-211ENST00000566550 LORP23490 312 aaPredicted RBP5.4□□□□□ -1.54
HERPUD1-211ENST00000566550 USP46P62068 366 aa5.4□□□□□ -1.54
HERPUD1-211ENST00000566550 KCNMA1Q12791 1236 aa5.4□□□□□ -1.54
HERPUD1-211ENST00000566550 AMHR2Q16671 573 aa5.4□□□□□ -1.54
HERPUD1-211ENST00000566550 TRIM46Q7Z4K8 759 aa5.4□□□□□ -1.54
HERPUD1-211ENST00000566550 IRF6O14896 467 aa5.39□□□□□ -1.55
HERPUD1-211ENST00000566550 KDM4AO75164 1064 aa5.39□□□□□ -1.55
HERPUD1-211ENST00000566550 SKOR1P84550 965 aa5.39□□□□□ -1.55
HERPUD1-211ENST00000566550 TMEM151AQ8N4L1 468 aa5.39□□□□□ -1.55
HERPUD1-211ENST00000566550 RNF225M0QZC1 329 aaPredicted RBP5.38□□□□□ -1.55
HERPUD1-211ENST00000566550 ZFP42Q96MM3 310 aa5.38□□□□□ -1.55
HERPUD1-211ENST00000566550 ERBB4Q15303 1308 aa5.38□□□□□ -1.55
HERPUD1-211ENST00000566550 MS4A1P11836 297 aa5.37□□□□□ -1.55
HERPUD1-211ENST00000566550 JUNDP17535 347 aa5.37□□□□□ -1.55
HERPUD1-211ENST00000566550 GIGYF2Q6Y7W6 1299 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-211ENST00000566550 NLRP7Q8WX94 980 aa5.37□□□□□ -1.55
HERPUD1-211ENST00000566550 GOPCQ9HD26 462 aa5.37□□□□□ -1.55
HERPUD1-211ENST00000566550 SIAH2O43255 324 aa5.36□□□□□ -1.55
HERPUD1-211ENST00000566550 IRF5Q13568 498 aa5.36□□□□□ -1.55
HERPUD1-211ENST00000566550 NUDT12Q9BQG2 462 aa5.36□□□□□ -1.55
HERPUD1-211ENST00000566550 SHROOM4Q9ULL8 1493 aa5.35□□□□□ -1.55
HERPUD1-211ENST00000566550 VSIG8P0DPA2 414 aa5.35□□□□□ -1.55
HERPUD1-211ENST00000566550 CD46P15529 392 aa5.35□□□□□ -1.55
HERPUD1-211ENST00000566550 MRPL14Q6P1L8 145 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-211ENST00000566550 GDF11O95390 407 aa5.34□□□□□ -1.55
HERPUD1-211ENST00000566550 FNBP4Q8N3X1 1017 aaPredicted RBP5.34□□□□□ -1.55
HERPUD1-211ENST00000566550 MAN1A2O60476 641 aa5.33□□□□□ -1.56
HERPUD1-211ENST00000566550 VARSP26640 1264 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-211ENST00000566550 SH3D19Q5HYK7 790 aa5.33□□□□□ -1.56
HERPUD1-211ENST00000566550 ZNF330Q9Y3S2 320 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-211ENST00000566550 E9PSI1 815 aa5.32□□□□□ -1.56
HERPUD1-211ENST00000566550 RETREG3Q86VR2 466 aa5.32□□□□□ -1.56
HERPUD1-211ENST00000566550 MPNDQ8N594 471 aa5.32□□□□□ -1.56
HERPUD1-211ENST00000566550 PURBQ96QR8 312 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-211ENST00000566550 PHOX2BQ99453 314 aa5.32□□□□□ -1.56
HERPUD1-211ENST00000566550 HOXA2O43364 376 aa5.31□□□□□ -1.56
HERPUD1-211ENST00000566550 UPP2O95045 317 aa5.31□□□□□ -1.56
HERPUD1-211ENST00000566550 CCNYL3P0C7X3 344 aa5.31□□□□□ -1.56
HERPUD1-211ENST00000566550 RASSF7Q02833 373 aa5.31□□□□□ -1.56
HERPUD1-211ENST00000566550 NNTQ13423 1086 aa5.31□□□□□ -1.56
HERPUD1-211ENST00000566550 NUTM1Q86Y26 1132 aa5.31□□□□□ -1.56
HERPUD1-211ENST00000566550 POLR3EQ9NVU0 708 aa5.31□□□□□ -1.56
HERPUD1-211ENST00000566550 COG6Q9Y2V7 657 aa5.31□□□□□ -1.56
HERPUD1-211ENST00000566550 ADH1CP00326 375 aa5.3□□□□□ -1.56
HERPUD1-211ENST00000566550 IGHA1P01876 353 aa5.3□□□□□ -1.56
HERPUD1-211ENST00000566550 WDR4P57081 412 aaKnown RBP5.3□□□□□ -1.56
HERPUD1-211ENST00000566550 SH3BP2P78314 561 aa5.3□□□□□ -1.56
HERPUD1-211ENST00000566550 PTCRAQ6ISU1 281 aaPredicted RBP5.3□□□□□ -1.56
HERPUD1-211ENST00000566550 PROCA1Q8NCQ7 364 aaPredicted RBP5.3□□□□□ -1.56
HERPUD1-211ENST00000566550 USP35Q9P2H5 1018 aa5.29□□□□□ -1.56
HERPUD1-211ENST00000566550 ACIN1Q9UKV3 1341 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 SPDYE5A6NIY4 337 aa5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 C6orf229H3BNL8 230 aa5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 PPFIA3O75145 1194 aa5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 MDM2Q00987 491 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 SKIV2LQ15477 1246 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 FAM174AQ8TBP5 190 aa5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 BAP1Q92560 729 aa5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 CALR3Q96L12 384 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-211ENST00000566550 SOBPA7XYQ1 873 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 TIMP2P16035 220 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 CDK11BP21127 795 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 FOXK2Q01167 660 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 PTPRNQ16849 979 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 LINC01559Q495D7 138 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 SYMPKQ92797 1274 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 HLA-CQ95604 372 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 UNC93B1Q9H1C4 597 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 SNRKQ9NRH2 765 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 EVA1BQ9NVM1 165 aa5.27□□□□□ -1.57
HERPUD1-211ENST00000566550 ADAMTS8Q9UP79 889 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms