RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 THEMISQ8N1K5 641 aaPredicted RBP13.98□□□□□ -0.17
CFDP1-206ENST00000566254 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
CFDP1-206ENST00000566254 MED14O60244 1454 aa13.98□□□□□ -0.17
CFDP1-206ENST00000566254 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
CFDP1-206ENST00000566254 UGGT1Q9NYU2 1555 aa13.97□□□□□ -0.17
CFDP1-206ENST00000566254 LRRC7Q96NW7 1537 aa13.97□□□□□ -0.17
CFDP1-206ENST00000566254 KDM5DQ9BY66 1539 aa13.97□□□□□ -0.17
CFDP1-206ENST00000566254 ADAM33Q9BZ11 813 aa13.97□□□□□ -0.17
CFDP1-206ENST00000566254 MBD5Q9P267 1494 aa13.96□□□□□ -0.17
CFDP1-206ENST00000566254 TTLL12Q14166 644 aaPredicted RBP13.96□□□□□ -0.17
CFDP1-206ENST00000566254 DEPDC5O75140 1603 aa13.96□□□□□ -0.17
CFDP1-206ENST00000566254 MIA2Q96PC5 1412 aa13.96□□□□□ -0.18
CFDP1-206ENST00000566254 FAM135AQ9P2D6 1515 aa13.95□□□□□ -0.18
CFDP1-206ENST00000566254 WASHC2CQ9Y4E1 1318 aa13.95□□□□□ -0.18
CFDP1-206ENST00000566254 NLRP1Q9C000 1473 aa13.95□□□□□ -0.18
CFDP1-206ENST00000566254 RNF17Q9BXT8 1623 aaKnown RBP13.95□□□□□ -0.18
CFDP1-206ENST00000566254 STRCP1A6NGW2 1772 aa13.95□□□□□ -0.18
CFDP1-206ENST00000566254 IQGAP1P46940 1657 aa13.95□□□□□ -0.18
CFDP1-206ENST00000566254 RTEL1-TNFRSF6BF6WH68 1400 aa13.94□□□□□ -0.18
CFDP1-206ENST00000566254 PLEKHG3A1L390 1219 aa13.93□□□□□ -0.18
CFDP1-206ENST00000566254 DDRGK1Q96HY6 314 aa13.93□□□□□ -0.18
CFDP1-206ENST00000566254 MTUS2Q5JR59 1369 aa13.93□□□□□ -0.18
CFDP1-206ENST00000566254 PADI6Q6TGC4 694 aa13.92□□□□□ -0.18
CFDP1-206ENST00000566254 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
CFDP1-206ENST00000566254 REPIN1Q9BWE0 567 aaKnown RBP13.92□□□□□ -0.18
CFDP1-206ENST00000566254 LHX6Q9UPM6 363 aa13.92□□□□□ -0.18
CFDP1-206ENST00000566254 SYNMO15061 1565 aa13.92□□□□□ -0.18
CFDP1-206ENST00000566254 TIAM1Q13009 1591 aa13.92□□□□□ -0.18
CFDP1-206ENST00000566254 POTEAQ6S8J7 498 aa13.91□□□□□ -0.18
CFDP1-206ENST00000566254 GIGYF2Q6Y7W6 1299 aaKnown RBP13.91□□□□□ -0.18
CFDP1-206ENST00000566254 TTC13Q8NBP0 860 aa13.9□□□□□ -0.18
CFDP1-206ENST00000566254 TMUB1Q9BVT8 246 aa13.9□□□□□ -0.18
CFDP1-206ENST00000566254 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
CFDP1-206ENST00000566254 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
CFDP1-206ENST00000566254 SNPHO15079 494 aa13.88□□□□□ -0.19
CFDP1-206ENST00000566254 FAM161AQ3B820 660 aa13.88□□□□□ -0.19
CFDP1-206ENST00000566254 CCDC141Q6ZP82 1450 aa13.87□□□□□ -0.19
CFDP1-206ENST00000566254 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
CFDP1-206ENST00000566254 OATP04181 439 aa13.87□□□□□ -0.19
CFDP1-206ENST00000566254 MS4A1P11836 297 aa13.87□□□□□ -0.19
CFDP1-206ENST00000566254 CLCN1P35523 988 aa13.87□□□□□ -0.19
CFDP1-206ENST00000566254 PPP4R3BQ5MIZ7 849 aa13.87□□□□□ -0.19
CFDP1-206ENST00000566254 METTL3Q86U44 580 aaKnown RBP13.87□□□□□ -0.19
CFDP1-206ENST00000566254 ADGRG1Q9Y653 693 aa13.87□□□□□ -0.19
CFDP1-206ENST00000566254 PRSS12P56730 875 aa13.86□□□□□ -0.19
CFDP1-206ENST00000566254 MDM2Q00987 491 aaPredicted RBP13.86□□□□□ -0.19
CFDP1-206ENST00000566254 ZC3H13Q5T200 1668 aaKnown RBP13.85□□□□□ -0.19
CFDP1-206ENST00000566254 HOXB1P14653 301 aaPredicted RBP13.85□□□□□ -0.19
CFDP1-206ENST00000566254 GPCPD1Q9NPB8 672 aa13.85□□□□□ -0.19
CFDP1-206ENST00000566254 PXYLP1Q8TE99 480 aa13.84□□□□□ -0.19
CFDP1-206ENST00000566254 CDCA7LQ96GN5 454 aa13.84□□□□□ -0.19
CFDP1-206ENST00000566254 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
CFDP1-206ENST00000566254 SCAF11Q99590 1463 aaKnown RBP13.84□□□□□ -0.19
CFDP1-206ENST00000566254 EHBP1L1Q8N3D4 1523 aa13.84□□□□□ -0.19
CFDP1-206ENST00000566254 ERVK-7P63135 1459 aa13.83□□□□□ -0.2
CFDP1-206ENST00000566254 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
CFDP1-206ENST00000566254 ABCC3O15438 1527 aa13.83□□□□□ -0.2
CFDP1-206ENST00000566254 FAM135BQ49AJ0 1406 aa13.82□□□□□ -0.2
CFDP1-206ENST00000566254 CEP162Q5TB80 1403 aa13.82□□□□□ -0.2
CFDP1-206ENST00000566254 LTKP29376 864 aa13.82□□□□□ -0.2
CFDP1-206ENST00000566254 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
CFDP1-206ENST00000566254 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
CFDP1-206ENST00000566254 COL9A1P20849 921 aa13.81□□□□□ -0.2
CFDP1-206ENST00000566254 NCOA2Q15596 1464 aa13.8□□□□□ -0.2
CFDP1-206ENST00000566254 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
CFDP1-206ENST00000566254 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
CFDP1-206ENST00000566254 UBR1Q8IWV7 1749 aa13.8□□□□□ -0.2
CFDP1-206ENST00000566254 SSTR3P32745 418 aaPredicted RBP13.79□□□□□ -0.2
CFDP1-206ENST00000566254 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
CFDP1-206ENST00000566254 NLRP7Q8WX94 980 aa13.79□□□□□ -0.2
CFDP1-206ENST00000566254 FAM198AQ9UFP1 575 aa13.79□□□□□ -0.2
CFDP1-206ENST00000566254 PTPREP23469 700 aa13.78□□□□□ -0.2
CFDP1-206ENST00000566254 GOPCQ9HD26 462 aa13.78□□□□□ -0.2
CFDP1-206ENST00000566254 TMEM94Q12767 1356 aa13.78□□□□□ -0.2
CFDP1-206ENST00000566254 ARHGAP23Q9P227 1491 aa13.78□□□□□ -0.2
CFDP1-206ENST00000566254 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
CFDP1-206ENST00000566254 SLIT1O75093 1534 aa13.77□□□□□ -0.21
CFDP1-206ENST00000566254 TSPY4P0CV99 314 aa13.77□□□□□ -0.21
CFDP1-206ENST00000566254 TSPY10P0CW01 314 aa13.77□□□□□ -0.21
CFDP1-206ENST00000566254 ROBO1Q9Y6N7 1651 aa13.76□□□□□ -0.21
CFDP1-206ENST00000566254 RBM46Q8TBY0 533 aaKnown RBP13.76□□□□□ -0.21
CFDP1-206ENST00000566254 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
CFDP1-206ENST00000566254 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
CFDP1-206ENST00000566254 MROH1Q8NDA8 1641 aa13.75□□□□□ -0.21
CFDP1-206ENST00000566254 ARHGEF5Q12774 1597 aa13.75□□□□□ -0.21
CFDP1-206ENST00000566254 CEP152O94986 1710 aa13.74□□□□□ -0.21
CFDP1-206ENST00000566254 TSKSQ9UJT2 592 aa13.74□□□□□ -0.21
CFDP1-206ENST00000566254 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
CFDP1-206ENST00000566254 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
CFDP1-206ENST00000566254 EYA1Q99502 592 aa13.72□□□□□ -0.21
CFDP1-206ENST00000566254 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
CFDP1-206ENST00000566254 TMEM2Q9UHN6 1383 aa13.71□□□□□ -0.21
CFDP1-206ENST00000566254 KCNA6P17658 529 aa13.71□□□□□ -0.21
CFDP1-206ENST00000566254 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
CFDP1-206ENST00000566254 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.21
CFDP1-206ENST00000566254 LRRC9Q6ZRR7 1453 aa13.7□□□□□ -0.22
CFDP1-206ENST00000566254 SH3D19Q5HYK7 790 aa13.7□□□□□ -0.22
CFDP1-206ENST00000566254 SLC26A8Q96RN1 970 aa13.7□□□□□ -0.22
CFDP1-206ENST00000566254 JCADQ9P266 1359 aa13.7□□□□□ -0.22
CFDP1-206ENST00000566254 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms