RNA–Protein interactions for RNA: ENST00000565844.1

KNOP1-203, Transcript of lysine rich nucleolar protein 1, humanhuman

TSL 5

Gene KNOP1, Length 1,394 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-203ENST00000565844 NGLY1Q96IV0 654 aa21.11■□□□□ 0.97
KNOP1-203ENST00000565844 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
KNOP1-203ENST00000565844 CABP1Q9NZU7 370 aa21.1■□□□□ 0.97
KNOP1-203ENST00000565844 SLC12A5Q9H2X9 1139 aa21.1■□□□□ 0.97
KNOP1-203ENST00000565844 QTRT2Q9H974 415 aaKnown RBP21.08■□□□□ 0.96
KNOP1-203ENST00000565844 MON2Q7Z3U7 1717 aa21.08■□□□□ 0.96
KNOP1-203ENST00000565844 CD163L1Q9NR16 1453 aa21.07■□□□□ 0.96
KNOP1-203ENST00000565844 PMFBP1Q8TBY8 1022 aa21.07■□□□□ 0.96
KNOP1-203ENST00000565844 PHF8Q9UPP1 1060 aa21.07■□□□□ 0.96
KNOP1-203ENST00000565844 PLEKHG3A1L390 1219 aa21.06■□□□□ 0.96
KNOP1-203ENST00000565844 ANKRD36BQ8N2N9 1353 aa21.06■□□□□ 0.96
KNOP1-203ENST00000565844 TERF2IPQ9NYB0 399 aa21.05■□□□□ 0.96
KNOP1-203ENST00000565844 ACEP12821 1306 aa21.05■□□□□ 0.96
KNOP1-203ENST00000565844 RGS12O14924 1447 aa21.04■□□□□ 0.96
KNOP1-203ENST00000565844 A0A1W2PP64 1363 aa21.04■□□□□ 0.96
KNOP1-203ENST00000565844 POLR3AO14802 1390 aaPredicted RBP21.04■□□□□ 0.96
KNOP1-203ENST00000565844 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
KNOP1-203ENST00000565844 KRT28Q7Z3Y7 464 aa21.04■□□□□ 0.96
KNOP1-203ENST00000565844 NGDNQ8NEJ9 315 aaKnown RBP21.04■□□□□ 0.96
KNOP1-203ENST00000565844 USP21Q9UK80 565 aa21.04■□□□□ 0.96
KNOP1-203ENST00000565844 CPSF1Q10570 1443 aaKnown RBP21.03■□□□□ 0.96
KNOP1-203ENST00000565844 HDGFL2Q7Z4V5 671 aaPredicted RBP21.03■□□□□ 0.96
KNOP1-203ENST00000565844 NRKQ7Z2Y5 1582 aa21.03■□□□□ 0.96
KNOP1-203ENST00000565844 PANK3Q9H999 370 aa21.02■□□□□ 0.96
KNOP1-203ENST00000565844 KTN1Q86UP2 1357 aaKnown RBP21.01■□□□□ 0.95
KNOP1-203ENST00000565844 ABCA3Q99758 1704 aa21.01■□□□□ 0.95
KNOP1-203ENST00000565844 SPATA31A3Q5VYP0 1347 aa21■□□□□ 0.95
KNOP1-203ENST00000565844 RBM6P78332 1123 aaKnown RBP21■□□□□ 0.95
KNOP1-203ENST00000565844 LMOD2Q6P5Q4 547 aa21■□□□□ 0.95
KNOP1-203ENST00000565844 CDK12Q9NYV4 1490 aaPredicted RBP21■□□□□ 0.95
KNOP1-203ENST00000565844 UPF1Q92900 1129 aaKnown RBP eCLIP20.99■□□□□ 0.95
KNOP1-203ENST00000565844 USP6P35125 1406 aa20.99■□□□□ 0.95
KNOP1-203ENST00000565844 CABLES1Q8TDN4 633 aa20.98■□□□□ 0.95
KNOP1-203ENST00000565844 ZNF692Q9BU19 519 aaPredicted RBP20.98■□□□□ 0.95
KNOP1-203ENST00000565844 TNS3Q68CZ2 1445 aa20.98■□□□□ 0.95
KNOP1-203ENST00000565844 TRPM3Q9HCF6 1732 aaPredicted RBP20.98■□□□□ 0.95
KNOP1-203ENST00000565844 KIF20BQ96Q89 1820 aa20.98■□□□□ 0.95
KNOP1-203ENST00000565844 PSME1Q06323 249 aa20.97■□□□□ 0.95
KNOP1-203ENST00000565844 NSD3Q9BZ95 1437 aa20.97■□□□□ 0.95
KNOP1-203ENST00000565844 EDC4Q6P2E9 1401 aaKnown RBP20.97■□□□□ 0.95
KNOP1-203ENST00000565844 FNBP4Q8N3X1 1017 aaPredicted RBP20.97■□□□□ 0.95
KNOP1-203ENST00000565844 CARD14Q9BXL6 1004 aa20.97■□□□□ 0.95
KNOP1-203ENST00000565844 ATRNO75882 1429 aa20.96■□□□□ 0.95
KNOP1-203ENST00000565844 HAP1P54257 671 aaPredicted RBP20.96■□□□□ 0.95
KNOP1-203ENST00000565844 TRPC5Q9UL62 973 aaPredicted RBP20.96■□□□□ 0.95
KNOP1-203ENST00000565844 PLCH1Q4KWH8 1693 aa20.95■□□□□ 0.94
KNOP1-203ENST00000565844 BCL9LQ86UU0 1499 aa20.94■□□□□ 0.94
KNOP1-203ENST00000565844 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.94■□□□□ 0.94
KNOP1-203ENST00000565844 KNSTRNQ9Y448 316 aa20.93■□□□□ 0.94
KNOP1-203ENST00000565844 SSH2Q76I76 1423 aa20.92■□□□□ 0.94
KNOP1-203ENST00000565844 PIK3C2AO00443 1686 aa20.92■□□□□ 0.94
KNOP1-203ENST00000565844 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.92■□□□□ 0.94
KNOP1-203ENST00000565844 ALS2Q96Q42 1657 aa20.91■□□□□ 0.94
KNOP1-203ENST00000565844 BRD4O60885 1362 aaPredicted RBP20.91■□□□□ 0.94
KNOP1-203ENST00000565844 ANKRD26Q9UPS8 1709 aa20.91■□□□□ 0.94
KNOP1-203ENST00000565844 SBNO1A3KN83 1393 aa20.9■□□□□ 0.94
KNOP1-203ENST00000565844 PER1O15534 1290 aaPredicted RBP20.9■□□□□ 0.94
KNOP1-203ENST00000565844 PAK3O75914 559 aaPredicted RBP20.9■□□□□ 0.94
KNOP1-203ENST00000565844 TTC21BQ7Z4L5 1316 aa20.9■□□□□ 0.94
KNOP1-203ENST00000565844 CGNL1Q0VF96 1302 aa20.89■□□□□ 0.93
KNOP1-203ENST00000565844 TTC21AQ8NDW8 1320 aa20.89■□□□□ 0.93
KNOP1-203ENST00000565844 BRWD3Q6RI45 1802 aa20.89■□□□□ 0.93
KNOP1-203ENST00000565844 GLI3P10071 1580 aa20.88■□□□□ 0.93
KNOP1-203ENST00000565844 SLIT2O94813 1529 aa20.88■□□□□ 0.93
KNOP1-203ENST00000565844 ARHGEF10O15013 1369 aa20.87■□□□□ 0.93
KNOP1-203ENST00000565844 CRYBG1Q9Y4K1 1723 aa20.86■□□□□ 0.93
KNOP1-203ENST00000565844 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
KNOP1-203ENST00000565844 NWD2Q9ULI1 1742 aa20.86■□□□□ 0.93
KNOP1-203ENST00000565844 NME9Q86XW9 330 aa20.85■□□□□ 0.93
KNOP1-203ENST00000565844 UNC5CLQ8IV45 518 aa20.85■□□□□ 0.93
KNOP1-203ENST00000565844 EP400Q96L91 3159 aa20.85■□□□□ 0.93
KNOP1-203ENST00000565844 AMER1Q5JTC6 1135 aaPredicted RBP20.85■□□□□ 0.93
KNOP1-203ENST00000565844 GJD4Q96KN9 370 aaPredicted RBP20.85■□□□□ 0.93
KNOP1-203ENST00000565844 CNGB1Q14028 1251 aaPredicted RBP20.84■□□□□ 0.93
KNOP1-203ENST00000565844 ABTB2Q8N961 1025 aa20.84■□□□□ 0.93
KNOP1-203ENST00000565844 NSD2O96028 1365 aa20.83■□□□□ 0.93
KNOP1-203ENST00000565844 NRAPQ86VF7 1730 aa20.83■□□□□ 0.92
KNOP1-203ENST00000565844 FYB1O15117 783 aa20.83■□□□□ 0.92
KNOP1-203ENST00000565844 CC2D1BQ5T0F9 858 aaKnown RBP20.83■□□□□ 0.92
KNOP1-203ENST00000565844 NPC1L1Q9UHC9 1359 aa20.83■□□□□ 0.92
KNOP1-203ENST00000565844 DIEXFQ68CQ4 756 aaKnown RBP20.82■□□□□ 0.92
KNOP1-203ENST00000565844 GGNBP2Q9H3C7 697 aa20.82■□□□□ 0.92
KNOP1-203ENST00000565844 CCDC9Q9Y3X0 531 aaKnown RBP20.82■□□□□ 0.92
KNOP1-203ENST00000565844 NUTM2GQ5VZR2 741 aa20.81■□□□□ 0.92
KNOP1-203ENST00000565844 ZRANB1Q9UGI0 708 aa20.81■□□□□ 0.92
KNOP1-203ENST00000565844 PHRF1Q9P1Y6 1649 aaKnown RBP20.8■□□□□ 0.92
KNOP1-203ENST00000565844 OVOS2A0A0J9YW53 1432 aa20.8■□□□□ 0.92
KNOP1-203ENST00000565844 OVOS2Q6IE36 1432 aa20.8■□□□□ 0.92
KNOP1-203ENST00000565844 FAM83GA6ND36 823 aa20.8■□□□□ 0.92
KNOP1-203ENST00000565844 USP31Q70CQ4 1352 aa20.79■□□□□ 0.92
KNOP1-203ENST00000565844 NLRP6P59044 892 aa20.79■□□□□ 0.92
KNOP1-203ENST00000565844 COL14A1Q05707 1796 aaKnown RBP20.79■□□□□ 0.92
KNOP1-203ENST00000565844 COG3Q96JB2 828 aa20.78■□□□□ 0.92
KNOP1-203ENST00000565844 MORC1Q86VD1 984 aa20.76■□□□□ 0.91
KNOP1-203ENST00000565844 NLRP13Q86W25 1043 aa20.76■□□□□ 0.91
KNOP1-203ENST00000565844 SLIT3O75094 1523 aa20.75■□□□□ 0.91
KNOP1-203ENST00000565844 BTG4Q9NY30 223 aa20.75■□□□□ 0.91
KNOP1-203ENST00000565844 VPS72Q15906 364 aa20.74■□□□□ 0.91
KNOP1-203ENST00000565844 PARD3Q8TEW0 1356 aa20.74■□□□□ 0.91
KNOP1-203ENST00000565844 ANP32CO43423 234 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms