RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 TMC1Q8TDI8 760 aa26.06■■□□□ 1.76
CSPG4P13-201ENST00000565545 KNSTRNQ9Y448 316 aa26.05■■□□□ 1.76
CSPG4P13-201ENST00000565545 SLC12A5Q9H2X9 1139 aa26.03■■□□□ 1.76
CSPG4P13-201ENST00000565545 NPC1L1Q9UHC9 1359 aa26.03■■□□□ 1.76
CSPG4P13-201ENST00000565545 RALBP1Q15311 655 aa26.02■■□□□ 1.76
CSPG4P13-201ENST00000565545 ANKRD36BQ8N2N9 1353 aa26.02■■□□□ 1.76
CSPG4P13-201ENST00000565545 TERF2IPQ9NYB0 399 aa26■■□□□ 1.75
CSPG4P13-201ENST00000565545 ATRNO75882 1429 aa25.99■■□□□ 1.75
CSPG4P13-201ENST00000565545 NUDT16Q96DE0 195 aaKnown RBP25.98■■□□□ 1.75
CSPG4P13-201ENST00000565545 USP32Q8NFA0 1604 aa25.98■■□□□ 1.75
CSPG4P13-201ENST00000565545 ATP7BP35670 1465 aa25.98■■□□□ 1.75
CSPG4P13-201ENST00000565545 CCDC61Q9Y6R9 512 aa25.97■■□□□ 1.75
CSPG4P13-201ENST00000565545 CDC42BPGQ6DT37 1551 aa25.96■■□□□ 1.75
CSPG4P13-201ENST00000565545 GJD4Q96KN9 370 aaPredicted RBP25.96■■□□□ 1.75
CSPG4P13-201ENST00000565545 PXDNQ92626 1479 aa25.96■■□□□ 1.75
CSPG4P13-201ENST00000565545 AMER1Q5JTC6 1135 aaPredicted RBP25.95■■□□□ 1.74
CSPG4P13-201ENST00000565545 HDGFL2Q7Z4V5 671 aaPredicted RBP25.95■■□□□ 1.74
CSPG4P13-201ENST00000565545 CARD14Q9BXL6 1004 aa25.95■■□□□ 1.74
CSPG4P13-201ENST00000565545 ZRANB1Q9UGI0 708 aa25.95■■□□□ 1.74
CSPG4P13-201ENST00000565545 PARD3Q8TEW0 1356 aa25.95■■□□□ 1.74
CSPG4P13-201ENST00000565545 CABP1Q9NZU7 370 aa25.94■■□□□ 1.74
CSPG4P13-201ENST00000565545 COL22A1Q8NFW1 1626 aaPredicted RBP25.94■■□□□ 1.74
CSPG4P13-201ENST00000565545 ITSN1Q15811 1721 aa25.94■■□□□ 1.74
CSPG4P13-201ENST00000565545 TOPAZ1Q8N9V7 1692 aa25.93■■□□□ 1.74
CSPG4P13-201ENST00000565545 BCL9LQ86UU0 1499 aa25.93■■□□□ 1.74
CSPG4P13-201ENST00000565545 PPIP5K1Q6PFW1 1433 aa25.93■■□□□ 1.74
CSPG4P13-201ENST00000565545 ANKARQ7Z5J8 1434 aa25.93■■□□□ 1.74
CSPG4P13-201ENST00000565545 FMN2Q9NZ56 1722 aa25.93■■□□□ 1.74
CSPG4P13-201ENST00000565545 NSD3Q9BZ95 1437 aa25.92■■□□□ 1.74
CSPG4P13-201ENST00000565545 CCDC125Q86Z20 511 aa25.92■■□□□ 1.74
CSPG4P13-201ENST00000565545 A0A1W2PP64 1363 aa25.92■■□□□ 1.74
CSPG4P13-201ENST00000565545 CD163L1Q9NR16 1453 aa25.91■■□□□ 1.74
CSPG4P13-201ENST00000565545 KRT28Q7Z3Y7 464 aa25.91■■□□□ 1.74
CSPG4P13-201ENST00000565545 PRR36Q9H6K5 1346 aa25.9■■□□□ 1.74
CSPG4P13-201ENST00000565545 HAP1P54257 671 aaPredicted RBP25.9■■□□□ 1.74
CSPG4P13-201ENST00000565545 UNC5CLQ8IV45 518 aa25.9■■□□□ 1.74
CSPG4P13-201ENST00000565545 SPATA31A3Q5VYP0 1347 aa25.89■■□□□ 1.74
CSPG4P13-201ENST00000565545 MYBBP1AQ9BQG0 1328 aaKnown RBP25.89■■□□□ 1.74
CSPG4P13-201ENST00000565545 CC2D1BQ5T0F9 858 aaKnown RBP25.89■■□□□ 1.74
CSPG4P13-201ENST00000565545 CGNL1Q0VF96 1302 aa25.88■■□□□ 1.73
CSPG4P13-201ENST00000565545 NSD2O96028 1365 aa25.88■■□□□ 1.73
CSPG4P13-201ENST00000565545 PLEKHG3A1L390 1219 aa25.88■■□□□ 1.73
CSPG4P13-201ENST00000565545 PLEKHG5O94827 1062 aa25.88■■□□□ 1.73
CSPG4P13-201ENST00000565545 CPSF1Q10570 1443 aaKnown RBP25.88■■□□□ 1.73
CSPG4P13-201ENST00000565545 AKAP12Q02952 1782 aa25.87■■□□□ 1.73
CSPG4P13-201ENST00000565545 ZNF692Q9BU19 519 aaPredicted RBP25.87■■□□□ 1.73
CSPG4P13-201ENST00000565545 PSME1Q06323 249 aa25.86■■□□□ 1.73
CSPG4P13-201ENST00000565545 PHF8Q9UPP1 1060 aa25.85■■□□□ 1.73
CSPG4P13-201ENST00000565545 MON2Q7Z3U7 1717 aa25.84■■□□□ 1.73
CSPG4P13-201ENST00000565545 CNGB1Q14028 1251 aaPredicted RBP25.83■■□□□ 1.73
CSPG4P13-201ENST00000565545 LMOD2Q6P5Q4 547 aa25.83■■□□□ 1.73
CSPG4P13-201ENST00000565545 RGPD8O14715 1765 aaPredicted RBP25.82■■□□□ 1.72
CSPG4P13-201ENST00000565545 NLRP13Q86W25 1043 aa25.82■■□□□ 1.72
CSPG4P13-201ENST00000565545 BRD4O60885 1362 aaPredicted RBP25.82■■□□□ 1.72
CSPG4P13-201ENST00000565545 EDC4Q6P2E9 1401 aaKnown RBP25.81■■□□□ 1.72
CSPG4P13-201ENST00000565545 CABLES1Q8TDN4 633 aa25.81■■□□□ 1.72
CSPG4P13-201ENST00000565545 CCDC9Q9Y3X0 531 aaKnown RBP25.8■■□□□ 1.72
CSPG4P13-201ENST00000565545 MRS2Q9HD23 443 aa25.79■■□□□ 1.72
CSPG4P13-201ENST00000565545 ANKRD26Q9UPS8 1709 aa25.79■■□□□ 1.72
CSPG4P13-201ENST00000565545 KIF20BQ96Q89 1820 aa25.79■■□□□ 1.72
CSPG4P13-201ENST00000565545 SLIT2O94813 1529 aa25.78■■□□□ 1.72
CSPG4P13-201ENST00000565545 SF3B2Q13435 895 aaKnown RBP25.77■■□□□ 1.72
CSPG4P13-201ENST00000565545 ACEP12821 1306 aa25.77■■□□□ 1.72
CSPG4P13-201ENST00000565545 POLR3AO14802 1390 aaPredicted RBP25.77■■□□□ 1.72
CSPG4P13-201ENST00000565545 SEPT12Q8IYM1 358 aa25.76■■□□□ 1.71
CSPG4P13-201ENST00000565545 MARF1Q9Y4F3 1742 aaKnown RBP25.76■■□□□ 1.71
CSPG4P13-201ENST00000565545 TNS3Q68CZ2 1445 aa25.75■■□□□ 1.71
CSPG4P13-201ENST00000565545 VPS72Q15906 364 aa25.75■■□□□ 1.71
CSPG4P13-201ENST00000565545 MORC1Q86VD1 984 aa25.75■■□□□ 1.71
CSPG4P13-201ENST00000565545 KIF1AQ12756 1690 aa25.74■■□□□ 1.71
CSPG4P13-201ENST00000565545 BLMP54132 1417 aaPredicted RBP25.74■■□□□ 1.71
CSPG4P13-201ENST00000565545 PPP2R1AP30153 589 aa25.74■■□□□ 1.71
CSPG4P13-201ENST00000565545 FYB1O15117 783 aa25.73■■□□□ 1.71
CSPG4P13-201ENST00000565545 CCDC184Q52MB2 194 aa25.73■■□□□ 1.71
CSPG4P13-201ENST00000565545 PMFBP1Q8TBY8 1022 aa25.73■■□□□ 1.71
CSPG4P13-201ENST00000565545 USP6P35125 1406 aa25.72■■□□□ 1.71
CSPG4P13-201ENST00000565545 DEFB132Q7Z7B7 95 aa25.72■■□□□ 1.71
CSPG4P13-201ENST00000565545 NRKQ7Z2Y5 1582 aa25.72■■□□□ 1.71
CSPG4P13-201ENST00000565545 SRCAPQ6ZRS2 3230 aa25.72■■□□□ 1.71
CSPG4P13-201ENST00000565545 SBNO1A3KN83 1393 aa25.71■■□□□ 1.71
CSPG4P13-201ENST00000565545 A0A0G2JS52 829 aa25.71■■□□□ 1.71
CSPG4P13-201ENST00000565545 MYT1Q01538 1121 aa25.71■■□□□ 1.71
CSPG4P13-201ENST00000565545 NGDNQ8NEJ9 315 aaKnown RBP25.71■■□□□ 1.71
CSPG4P13-201ENST00000565545 ARHGEF10O15013 1369 aa25.7■■□□□ 1.71
CSPG4P13-201ENST00000565545 GLI3P10071 1580 aa25.7■■□□□ 1.71
CSPG4P13-201ENST00000565545 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.68■■□□□ 1.7
CSPG4P13-201ENST00000565545 FAM83GA6ND36 823 aa25.68■■□□□ 1.7
CSPG4P13-201ENST00000565545 KRT27Q7Z3Y8 459 aa25.68■■□□□ 1.7
CSPG4P13-201ENST00000565545 SSH2Q76I76 1423 aa25.68■■□□□ 1.7
CSPG4P13-201ENST00000565545 TTC21BQ7Z4L5 1316 aa25.67■■□□□ 1.7
CSPG4P13-201ENST00000565545 TTC21AQ8NDW8 1320 aa25.67■■□□□ 1.7
CSPG4P13-201ENST00000565545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.67■■□□□ 1.7
CSPG4P13-201ENST00000565545 EP400Q96L91 3159 aa25.67■■□□□ 1.7
CSPG4P13-201ENST00000565545 ONECUT3O60422 494 aaPredicted RBP25.66■■□□□ 1.7
CSPG4P13-201ENST00000565545 GGNBP2Q9H3C7 697 aa25.66■■□□□ 1.7
CSPG4P13-201ENST00000565545 PNISRQ8TF01 805 aaKnown RBP25.64■■□□□ 1.7
CSPG4P13-201ENST00000565545 YTHDC1Q96MU7 727 aaKnown RBP25.62■■□□□ 1.69
CSPG4P13-201ENST00000565545 BTG4Q9NY30 223 aa25.62■■□□□ 1.69
CSPG4P13-201ENST00000565545 COG3Q96JB2 828 aa25.61■■□□□ 1.69
CSPG4P13-201ENST00000565545 FAM98CQ17RN3 349 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms