RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 PMFBP1Q8TBY8 1022 aa25.95■■□□□ 1.75
CLN6-205ENST00000564846 SSH2Q76I76 1423 aa25.95■■□□□ 1.75
CLN6-205ENST00000564846 AATKQ6ZMQ8 1374 aa25.95■■□□□ 1.74
CLN6-205ENST00000564846 NGDNQ8NEJ9 315 aaKnown RBP25.95■■□□□ 1.74
CLN6-205ENST00000564846 SALL2Q9Y467 1007 aaPredicted RBP25.95■■□□□ 1.74
CLN6-205ENST00000564846 PNPLA6Q8IY17 1366 aa25.94■■□□□ 1.74
CLN6-205ENST00000564846 TTC21AQ8NDW8 1320 aa25.93■■□□□ 1.74
CLN6-205ENST00000564846 HSPA2P54652 639 aa25.93■■□□□ 1.74
CLN6-205ENST00000564846 NGEFQ8N5V2 710 aa25.93■■□□□ 1.74
CLN6-205ENST00000564846 LMTK3Q96Q04 1460 aa25.93■■□□□ 1.74
CLN6-205ENST00000564846 COL3A1P02461 1466 aaPredicted RBP25.92■■□□□ 1.74
CLN6-205ENST00000564846 RGPD8O14715 1765 aaPredicted RBP25.92■■□□□ 1.74
CLN6-205ENST00000564846 NEFLP07196 543 aa25.92■■□□□ 1.74
CLN6-205ENST00000564846 RBM33Q96EV2 1170 aaKnown RBP25.92■■□□□ 1.74
CLN6-205ENST00000564846 C14orf37Q86TY3 774 aa25.91■■□□□ 1.74
CLN6-205ENST00000564846 CCDC146Q8IYE0 955 aa25.91■■□□□ 1.74
CLN6-205ENST00000564846 POLKQ9UBT6 870 aa25.91■■□□□ 1.74
CLN6-205ENST00000564846 PROSER2Q86WR7 435 aaPredicted RBP25.9■■□□□ 1.74
CLN6-205ENST00000564846 ZRANB1Q9UGI0 708 aa25.9■■□□□ 1.74
CLN6-205ENST00000564846 SUPT16HQ9Y5B9 1047 aaKnown RBP25.9■■□□□ 1.74
CLN6-205ENST00000564846 OVOS2A0A0J9YW53 1432 aa25.88■■□□□ 1.73
CLN6-205ENST00000564846 OVOS2Q6IE36 1432 aa25.88■■□□□ 1.73
CLN6-205ENST00000564846 RUNDC1Q96C34 613 aa25.88■■□□□ 1.73
CLN6-205ENST00000564846 APAF1O14727 1248 aa25.87■■□□□ 1.73
CLN6-205ENST00000564846 DIAPH1O60610 1272 aaKnown RBP25.86■■□□□ 1.73
CLN6-205ENST00000564846 U2AF1L5P0DN76 240 aaPredicted RBP25.86■■□□□ 1.73
CLN6-205ENST00000564846 U2AF1Q01081 240 aaKnown RBP eCLIP25.86■■□□□ 1.73
CLN6-205ENST00000564846 PHF8Q9UPP1 1060 aa25.86■■□□□ 1.73
CLN6-205ENST00000564846 ZNF521Q96K83 1311 aa25.84■■□□□ 1.73
CLN6-205ENST00000564846 NCOA3Q9Y6Q9 1424 aa25.84■■□□□ 1.73
CLN6-205ENST00000564846 USP31Q70CQ4 1352 aa25.84■■□□□ 1.73
CLN6-205ENST00000564846 CDK12Q9NYV4 1490 aaPredicted RBP25.84■■□□□ 1.73
CLN6-205ENST00000564846 FBLN1P23142 703 aa25.83■■□□□ 1.73
CLN6-205ENST00000564846 C19orf44Q9H6X5 657 aa25.83■■□□□ 1.73
CLN6-205ENST00000564846 MAP2P11137 1827 aaKnown RBP25.82■■□□□ 1.72
CLN6-205ENST00000564846 FKBP8Q14318 412 aa25.82■■□□□ 1.72
CLN6-205ENST00000564846 PPM1GO15355 546 aaPredicted RBP25.82■■□□□ 1.72
CLN6-205ENST00000564846 U2SURPO15042 1029 aaKnown RBP25.81■■□□□ 1.72
CLN6-205ENST00000564846 EMILIN1Q9Y6C2 1016 aa25.81■■□□□ 1.72
CLN6-205ENST00000564846 CDCA7LQ96GN5 454 aa25.8■■□□□ 1.72
CLN6-205ENST00000564846 NCBP3Q53F19 620 aaKnown RBP25.79■■□□□ 1.72
CLN6-205ENST00000564846 ESCO1Q5FWF5 840 aa25.79■■□□□ 1.72
CLN6-205ENST00000564846 GOLGA2Q08379 1002 aa25.79■■□□□ 1.72
CLN6-205ENST00000564846 IQSEC2Q5JU85 1478 aa25.79■■□□□ 1.72
CLN6-205ENST00000564846 PNNQ9H307 717 aaKnown RBP25.78■■□□□ 1.72
CLN6-205ENST00000564846 STRCQ7RTU9 1775 aa25.78■■□□□ 1.72
CLN6-205ENST00000564846 TMEM94Q12767 1356 aa25.78■■□□□ 1.72
CLN6-205ENST00000564846 RRS1Q15050 365 aaKnown RBP25.77■■□□□ 1.72
CLN6-205ENST00000564846 DCCP43146 1447 aa25.77■■□□□ 1.72
CLN6-205ENST00000564846 TCP11L2Q8N4U5 519 aa25.77■■□□□ 1.72
CLN6-205ENST00000564846 STRCP1A6NGW2 1772 aa25.76■■□□□ 1.71
CLN6-205ENST00000564846 PIK3C2AO00443 1686 aa25.76■■□□□ 1.71
CLN6-205ENST00000564846 PLEKHF1Q96S99 279 aa25.74■■□□□ 1.71
CLN6-205ENST00000564846 FCHSD2O94868 740 aa25.73■■□□□ 1.71
CLN6-205ENST00000564846 IL13P35225 146 aa25.73■■□□□ 1.71
CLN6-205ENST00000564846 PSME1Q06323 249 aa25.73■■□□□ 1.71
CLN6-205ENST00000564846 LRRC7Q96NW7 1537 aa25.73■■□□□ 1.71
CLN6-205ENST00000564846 ATF3P18847 181 aa25.72■■□□□ 1.71
CLN6-205ENST00000564846 NLRP6P59044 892 aa25.72■■□□□ 1.71
CLN6-205ENST00000564846 CCDC27Q2M243 656 aa25.72■■□□□ 1.71
CLN6-205ENST00000564846 USP54Q70EL1 1684 aa25.72■■□□□ 1.71
CLN6-205ENST00000564846 RNF123Q5XPI4 1314 aa25.72■■□□□ 1.71
CLN6-205ENST00000564846 C1orf167Q5SNV9 1468 aa25.72■■□□□ 1.71
CLN6-205ENST00000564846 ABTB2Q8N961 1025 aa25.72■■□□□ 1.71
CLN6-205ENST00000564846 PAK3O75914 559 aaPredicted RBP25.71■■□□□ 1.71
CLN6-205ENST00000564846 SLFN5Q08AF3 891 aa25.71■■□□□ 1.71
CLN6-205ENST00000564846 WWC1Q8IX03 1113 aa25.71■■□□□ 1.71
CLN6-205ENST00000564846 ORAI2Q96SN7 254 aa25.71■■□□□ 1.71
CLN6-205ENST00000564846 PHF23Q9BUL5 403 aaPredicted RBP25.71■■□□□ 1.71
CLN6-205ENST00000564846 MAPK8IP3Q9UPT6 1336 aa25.7■■□□□ 1.7
CLN6-205ENST00000564846 E9PSI1 815 aa25.69■■□□□ 1.7
CLN6-205ENST00000564846 DUSP27Q5VZP5 1158 aa25.69■■□□□ 1.7
CLN6-205ENST00000564846 ERICH6BQ5W0A0 696 aa25.69■■□□□ 1.7
CLN6-205ENST00000564846 RCAN3Q9UKA8 241 aa25.69■■□□□ 1.7
CLN6-205ENST00000564846 KIF1AQ12756 1690 aa25.68■■□□□ 1.7
CLN6-205ENST00000564846 CADPS2Q86UW7 1296 aa25.68■■□□□ 1.7
CLN6-205ENST00000564846 TRMT2AQ8IZ69 625 aaKnown RBP25.68■■□□□ 1.7
CLN6-205ENST00000564846 RRP7AQ9Y3A4 280 aaKnown RBP25.67■■□□□ 1.7
CLN6-205ENST00000564846 MST1RQ04912 1400 aa25.66■■□□□ 1.7
CLN6-205ENST00000564846 NEUROD2Q15784 382 aa25.66■■□□□ 1.7
CLN6-205ENST00000564846 RSPH6AQ9H0K4 717 aa25.66■■□□□ 1.7
CLN6-205ENST00000564846 MAP3K19Q56UN5 1328 aa25.66■■□□□ 1.7
CLN6-205ENST00000564846 SBNO1A3KN83 1393 aa25.66■■□□□ 1.7
CLN6-205ENST00000564846 MSH6P52701 1360 aa25.66■■□□□ 1.7
CLN6-205ENST00000564846 FOXO3O43524 673 aa25.65■■□□□ 1.7
CLN6-205ENST00000564846 NEFMP07197 916 aa25.65■■□□□ 1.7
CLN6-205ENST00000564846 WDR63Q8IWG1 891 aa25.65■■□□□ 1.7
CLN6-205ENST00000564846 SOX12O15370 315 aa25.64■■□□□ 1.7
CLN6-205ENST00000564846 KIF24Q5T7B8 1368 aa25.64■■□□□ 1.7
CLN6-205ENST00000564846 FLT4P35916 1363 aa25.64■■□□□ 1.69
CLN6-205ENST00000564846 TMPOP42166 694 aaKnown RBP25.64■■□□□ 1.69
CLN6-205ENST00000564846 MARF1Q9Y4F3 1742 aaKnown RBP25.63■■□□□ 1.69
CLN6-205ENST00000564846 PEAK1Q9H792 1746 aa25.63■■□□□ 1.69
CLN6-205ENST00000564846 EIF4A2Q14240 407 aaKnown RBP25.62■■□□□ 1.69
CLN6-205ENST00000564846 PRKAR2BP31323 418 aa25.61■■□□□ 1.69
CLN6-205ENST00000564846 NUTM2GQ5VZR2 741 aa25.61■■□□□ 1.69
CLN6-205ENST00000564846 DMRT2Q9Y5R5 561 aa25.61■■□□□ 1.69
CLN6-205ENST00000564846 IRX6P78412 446 aaPredicted RBP25.61■■□□□ 1.69
CLN6-205ENST00000564846 HSP90AB2PQ58FF8 381 aa25.61■■□□□ 1.69
CLN6-205ENST00000564846 SPINK5Q9NQ38 1064 aaPredicted RBP25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms