RNA–Protein interactions for RNA: ENST00000564784.5

NEIL1-206, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 2,019 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-206ENST00000564784 IL16Q14005 1332 aa27.77■■■□□ 2.04
NEIL1-206ENST00000564784 FYB1O15117 783 aa27.77■■■□□ 2.04
NEIL1-206ENST00000564784 SRPK2P78362 688 aaKnown RBP27.77■■■□□ 2.04
NEIL1-206ENST00000564784 GGNBP2Q9H3C7 697 aa27.76■■■□□ 2.03
NEIL1-206ENST00000564784 STK26Q9P289 416 aa27.76■■■□□ 2.03
NEIL1-206ENST00000564784 TERF2IPQ9NYB0 399 aa27.75■■■□□ 2.03
NEIL1-206ENST00000564784 DZIP1LQ8IYY4 767 aaKnown RBP27.75■■■□□ 2.03
NEIL1-206ENST00000564784 PNPLA6Q8IY17 1366 aa27.74■■■□□ 2.03
NEIL1-206ENST00000564784 TSR2Q969E8 191 aaKnown RBP27.73■■■□□ 2.03
NEIL1-206ENST00000564784 EXOSC9Q06265 439 aaKnown RBP27.72■■■□□ 2.03
NEIL1-206ENST00000564784 ALKQ9UM73 1620 aa27.72■■■□□ 2.03
NEIL1-206ENST00000564784 PRAM1Q96QH2 718 aa27.72■■■□□ 2.03
NEIL1-206ENST00000564784 KIF20BQ96Q89 1820 aa27.71■■■□□ 2.03
NEIL1-206ENST00000564784 ARHGEF40Q8TER5 1519 aa27.71■■■□□ 2.03
NEIL1-206ENST00000564784 U2SURPO15042 1029 aaKnown RBP27.71■■■□□ 2.03
NEIL1-206ENST00000564784 DNAJC5Q9H3Z4 198 aa27.71■■■□□ 2.03
NEIL1-206ENST00000564784 CDC42BPGQ6DT37 1551 aa27.71■■■□□ 2.03
NEIL1-206ENST00000564784 FRAT2O75474 233 aaPredicted RBP27.7■■■□□ 2.03
NEIL1-206ENST00000564784 MINK1Q8N4C8 1332 aaPredicted RBP27.69■■■□□ 2.02
NEIL1-206ENST00000564784 BECN1Q14457 450 aa27.69■■■□□ 2.02
NEIL1-206ENST00000564784 TBC1D32Q96NH3 1257 aa27.69■■■□□ 2.02
NEIL1-206ENST00000564784 FTSJ3Q8IY81 847 aaKnown RBP27.68■■■□□ 2.02
NEIL1-206ENST00000564784 SSH1Q8WYL5 1049 aa27.68■■■□□ 2.02
NEIL1-206ENST00000564784 TRIM27P14373 513 aa27.67■■■□□ 2.02
NEIL1-206ENST00000564784 HDAC1Q13547 482 aaPredicted RBP27.67■■■□□ 2.02
NEIL1-206ENST00000564784 SMC4Q9NTJ3 1288 aa27.67■■■□□ 2.02
NEIL1-206ENST00000564784 POGKQ9P215 609 aa27.66■■■□□ 2.02
NEIL1-206ENST00000564784 IL27Q8NEV9 243 aa27.65■■■□□ 2.02
NEIL1-206ENST00000564784 DIAPH1O60610 1272 aaKnown RBP27.65■■■□□ 2.02
NEIL1-206ENST00000564784 ATF7IPQ6VMQ6 1270 aa27.65■■■□□ 2.02
NEIL1-206ENST00000564784 HDGFL2Q7Z4V5 671 aaPredicted RBP27.64■■■□□ 2.02
NEIL1-206ENST00000564784 PNNQ9H307 717 aaKnown RBP27.64■■■□□ 2.02
NEIL1-206ENST00000564784 DDX19BQ9UMR2 479 aa27.64■■■□□ 2.02
NEIL1-206ENST00000564784 DLC1Q96QB1 1528 aa27.63■■■□□ 2.01
NEIL1-206ENST00000564784 CDK19Q9BWU1 502 aa27.63■■■□□ 2.01
NEIL1-206ENST00000564784 UPF2Q9HAU5 1272 aaKnown RBP27.63■■■□□ 2.01
NEIL1-206ENST00000564784 RIPK4P57078 832 aa27.62■■■□□ 2.01
NEIL1-206ENST00000564784 ANTXR1Q9H6X2 564 aa27.6■■■□□ 2.01
NEIL1-206ENST00000564784 FBXO31Q5XUX0 539 aaPredicted RBP27.6■■■□□ 2.01
NEIL1-206ENST00000564784 NOB1Q9ULX3 412 aaKnown RBP27.6■■■□□ 2.01
NEIL1-206ENST00000564784 FCHSD2O94868 740 aa27.59■■■□□ 2.01
NEIL1-206ENST00000564784 LRRC7Q96NW7 1537 aa27.59■■■□□ 2.01
NEIL1-206ENST00000564784 SMC5Q8IY18 1101 aa27.58■■■□□ 2.01
NEIL1-206ENST00000564784 CABP1Q9NZU7 370 aa27.58■■■□□ 2.01
NEIL1-206ENST00000564784 SETD1AO15047 1707 aaKnown RBP27.58■■■□□ 2.01
NEIL1-206ENST00000564784 ATP7BP35670 1465 aa27.58■■■□□ 2.01
NEIL1-206ENST00000564784 FAM135BQ49AJ0 1406 aa27.58■■■□□ 2.01
NEIL1-206ENST00000564784 SENP3Q9H4L4 574 aaPredicted RBP27.57■■■□□ 2
NEIL1-206ENST00000564784 ALDH1L2Q3SY69 923 aa27.57■■■□□ 2
NEIL1-206ENST00000564784 ZBTB40Q9NUA8 1239 aa27.57■■■□□ 2
NEIL1-206ENST00000564784 KIF16BQ96L93 1317 aa27.56■■■□□ 2
NEIL1-206ENST00000564784 PPIP5K1Q6PFW1 1433 aa27.56■■■□□ 2
NEIL1-206ENST00000564784 ITPRIPQ8IWB1 547 aa27.56■■■□□ 2
NEIL1-206ENST00000564784 REREQ9P2R6 1566 aa27.55■■■□□ 2
NEIL1-206ENST00000564784 BRPF1P55201 1214 aaPredicted RBP27.55■■■□□ 2
NEIL1-206ENST00000564784 TMEM57Q8N5G2 664 aa27.55■■■□□ 2
NEIL1-206ENST00000564784 TBC1D2Q9BYX2 928 aa27.55■■■□□ 2
NEIL1-206ENST00000564784 RSPH6AQ9H0K4 717 aa27.54■■■□□ 2
NEIL1-206ENST00000564784 IPO8O15397 1037 aaKnown RBP27.53■■■□□ 2
NEIL1-206ENST00000564784 POLKQ9UBT6 870 aa27.53■■■□□ 2
NEIL1-206ENST00000564784 AGLP35573 1532 aa27.52■■■□□ 2
NEIL1-206ENST00000564784 ZNF428Q96B54 188 aa27.51■■■□□ 2
NEIL1-206ENST00000564784 A2ML1A8K2U0 1454 aa27.51■■□□□ 1.99
NEIL1-206ENST00000564784 MAP2P11137 1827 aaKnown RBP27.51■■□□□ 1.99
NEIL1-206ENST00000564784 PPP6R1Q9UPN7 881 aa27.5■■□□□ 1.99
NEIL1-206ENST00000564784 SPATA31D1Q6ZQQ2 1576 aa27.49■■□□□ 1.99
NEIL1-206ENST00000564784 BRPF3Q9ULD4 1205 aa27.49■■□□□ 1.99
NEIL1-206ENST00000564784 SLKQ9H2G2 1235 aaPredicted RBP27.48■■□□□ 1.99
NEIL1-206ENST00000564784 PRKAR2BP31323 418 aa27.48■■□□□ 1.99
NEIL1-206ENST00000564784 CPSF1Q10570 1443 aaKnown RBP27.47■■□□□ 1.99
NEIL1-206ENST00000564784 C22orf23Q9BZE7 217 aa27.46■■□□□ 1.99
NEIL1-206ENST00000564784 NUCB1Q02818 461 aa27.45■■□□□ 1.98
NEIL1-206ENST00000564784 NFE2L2Q16236 605 aa27.45■■□□□ 1.98
NEIL1-206ENST00000564784 RIMS2Q9UQ26 1411 aa27.44■■□□□ 1.98
NEIL1-206ENST00000564784 PIK3R4Q99570 1358 aa27.44■■□□□ 1.98
NEIL1-206ENST00000564784 WAPLQ7Z5K2 1190 aa27.44■■□□□ 1.98
NEIL1-206ENST00000564784 STAG3Q9UJ98 1225 aa27.44■■□□□ 1.98
NEIL1-206ENST00000564784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.43■■□□□ 1.98
NEIL1-206ENST00000564784 EDC4Q6P2E9 1401 aaKnown RBP27.43■■□□□ 1.98
NEIL1-206ENST00000564784 ARHGAP45Q92619 1136 aa27.42■■□□□ 1.98
NEIL1-206ENST00000564784 PHACTR3Q96KR7 559 aa27.42■■□□□ 1.98
NEIL1-206ENST00000564784 CDK12Q9NYV4 1490 aaPredicted RBP27.42■■□□□ 1.98
NEIL1-206ENST00000564784 NRXN3Q9Y4C0 1643 aa27.42■■□□□ 1.98
NEIL1-206ENST00000564784 FBLN1P23142 703 aa27.41■■□□□ 1.98
NEIL1-206ENST00000564784 PTCH1Q13635 1447 aa27.41■■□□□ 1.98
NEIL1-206ENST00000564784 VAMP4O75379 141 aa27.41■■□□□ 1.98
NEIL1-206ENST00000564784 IL13P35225 146 aa27.4■■□□□ 1.98
NEIL1-206ENST00000564784 AATKQ6ZMQ8 1374 aa27.4■■□□□ 1.98
NEIL1-206ENST00000564784 ZNF853P0CG23 659 aa27.4■■□□□ 1.98
NEIL1-206ENST00000564784 CALD1Q05682 793 aaKnown RBP27.4■■□□□ 1.98
NEIL1-206ENST00000564784 MRPL50Q8N5N7 158 aaKnown RBP27.4■■□□□ 1.98
NEIL1-206ENST00000564784 MFAP1P55081 439 aaKnown RBP27.39■■□□□ 1.98
NEIL1-206ENST00000564784 IFT57Q9NWB7 429 aa27.38■■□□□ 1.97
NEIL1-206ENST00000564784 ZBTB7BO15156 539 aaPredicted RBP27.37■■□□□ 1.97
NEIL1-206ENST00000564784 MON2Q7Z3U7 1717 aa27.37■■□□□ 1.97
NEIL1-206ENST00000564784 DIP2BQ9P265 1576 aa27.37■■□□□ 1.97
NEIL1-206ENST00000564784 RTN4Q9NQC3 1192 aaKnown RBP27.36■■□□□ 1.97
NEIL1-206ENST00000564784 WASLO00401 505 aaPredicted RBP27.36■■□□□ 1.97
NEIL1-206ENST00000564784 CHD1LQ86WJ1 897 aa27.36■■□□□ 1.97
NEIL1-206ENST00000564784 DLG5Q8TDM6 1919 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms