RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 TERF2IPQ9NYB0 399 aa19.63■□□□□ 0.73
HERC2-207ENST00000564734 REREQ9P2R6 1566 aa19.62■□□□□ 0.73
HERC2-207ENST00000564734 VIRMAQ69YN4 1812 aaKnown RBP19.61■□□□□ 0.73
HERC2-207ENST00000564734 PCDHB15Q9Y5E8 787 aa19.61■□□□□ 0.73
HERC2-207ENST00000564734 MAPK8IP3Q9UPT6 1336 aa19.61■□□□□ 0.73
HERC2-207ENST00000564734 PNPLA6Q8IY17 1366 aa19.61■□□□□ 0.73
HERC2-207ENST00000564734 CT47B1P0C2W7 299 aaPredicted RBP19.61■□□□□ 0.73
HERC2-207ENST00000564734 POGKQ9P215 609 aa19.6■□□□□ 0.73
HERC2-207ENST00000564734 TRIM35Q9UPQ4 493 aa19.6■□□□□ 0.73
HERC2-207ENST00000564734 TMPOP42166 694 aaKnown RBP19.6■□□□□ 0.73
HERC2-207ENST00000564734 PMFBP1Q8TBY8 1022 aa19.6■□□□□ 0.73
HERC2-207ENST00000564734 AGLP35573 1532 aa19.6■□□□□ 0.73
HERC2-207ENST00000564734 NEFMP07197 916 aa19.6■□□□□ 0.73
HERC2-207ENST00000564734 BCL2L13Q9BXK5 485 aa19.6■□□□□ 0.73
HERC2-207ENST00000564734 CDK19Q9BWU1 502 aa19.59■□□□□ 0.73
HERC2-207ENST00000564734 USP19O94966 1318 aa19.59■□□□□ 0.73
HERC2-207ENST00000564734 DLC1Q96QB1 1528 aa19.58■□□□□ 0.73
HERC2-207ENST00000564734 PPP6R1Q9UPN7 881 aa19.58■□□□□ 0.72
HERC2-207ENST00000564734 SLC4A3P48751 1232 aa19.57■□□□□ 0.72
HERC2-207ENST00000564734 STAG3Q9UJ98 1225 aa19.57■□□□□ 0.72
HERC2-207ENST00000564734 IL16Q14005 1332 aa19.57■□□□□ 0.72
HERC2-207ENST00000564734 ZMYM3Q14202 1370 aa19.57■□□□□ 0.72
HERC2-207ENST00000564734 U2SURPO15042 1029 aaKnown RBP19.56■□□□□ 0.72
HERC2-207ENST00000564734 A2ML1A8K2U0 1454 aa19.56■□□□□ 0.72
HERC2-207ENST00000564734 HDGFL2Q7Z4V5 671 aaPredicted RBP19.56■□□□□ 0.72
HERC2-207ENST00000564734 TSR2Q969E8 191 aaKnown RBP19.56■□□□□ 0.72
HERC2-207ENST00000564734 SPATA31D1Q6ZQQ2 1576 aa19.55■□□□□ 0.72
HERC2-207ENST00000564734 MVPQ14764 893 aaKnown RBP19.55■□□□□ 0.72
HERC2-207ENST00000564734 CABP1Q9NZU7 370 aa19.55■□□□□ 0.72
HERC2-207ENST00000564734 CDC42BPGQ6DT37 1551 aa19.55■□□□□ 0.72
HERC2-207ENST00000564734 SETD1AO15047 1707 aaKnown RBP19.55■□□□□ 0.72
HERC2-207ENST00000564734 KIF20BQ96Q89 1820 aa19.55■□□□□ 0.72
HERC2-207ENST00000564734 ZKSCAN2Q63HK3 967 aa19.54■□□□□ 0.72
HERC2-207ENST00000564734 EXOSC9Q06265 439 aaKnown RBP19.54■□□□□ 0.72
HERC2-207ENST00000564734 DIAPH1O60610 1272 aaKnown RBP19.53■□□□□ 0.72
HERC2-207ENST00000564734 SEC24BO95487 1268 aa19.52■□□□□ 0.72
HERC2-207ENST00000564734 DZIP1LQ8IYY4 767 aaKnown RBP19.52■□□□□ 0.72
HERC2-207ENST00000564734 PDZRN3Q9UPQ7 1066 aa19.51■□□□□ 0.71
HERC2-207ENST00000564734 ATP7BP35670 1465 aa19.51■□□□□ 0.71
HERC2-207ENST00000564734 RWDD1Q9H446 243 aaPredicted RBP19.51■□□□□ 0.71
HERC2-207ENST00000564734 RIMS2Q9UQ26 1411 aa19.5■□□□□ 0.71
HERC2-207ENST00000564734 RIPK4P57078 832 aa19.49■□□□□ 0.71
HERC2-207ENST00000564734 SSH1Q8WYL5 1049 aa19.49■□□□□ 0.71
HERC2-207ENST00000564734 PNNQ9H307 717 aaKnown RBP19.49■□□□□ 0.71
HERC2-207ENST00000564734 DAXXQ9UER7 740 aaPredicted RBP19.49■□□□□ 0.71
HERC2-207ENST00000564734 NFKBIBQ15653 356 aa19.49■□□□□ 0.71
HERC2-207ENST00000564734 WAPLQ7Z5K2 1190 aa19.49■□□□□ 0.71
HERC2-207ENST00000564734 FCHSD2O94868 740 aa19.48■□□□□ 0.71
HERC2-207ENST00000564734 TRIM27P14373 513 aa19.48■□□□□ 0.71
HERC2-207ENST00000564734 SMC4Q9NTJ3 1288 aa19.48■□□□□ 0.71
HERC2-207ENST00000564734 POLKQ9UBT6 870 aa19.47■□□□□ 0.71
HERC2-207ENST00000564734 FAM135BQ49AJ0 1406 aa19.47■□□□□ 0.71
HERC2-207ENST00000564734 LRRC7Q96NW7 1537 aa19.47■□□□□ 0.71
HERC2-207ENST00000564734 NRXN3Q9Y4C0 1643 aa19.47■□□□□ 0.71
HERC2-207ENST00000564734 RSPH6AQ9H0K4 717 aa19.47■□□□□ 0.71
HERC2-207ENST00000564734 CPSF1Q10570 1443 aaKnown RBP19.46■□□□□ 0.71
HERC2-207ENST00000564734 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
HERC2-207ENST00000564734 ATF7IPQ6VMQ6 1270 aa19.45■□□□□ 0.7
HERC2-207ENST00000564734 HDAC1Q13547 482 aaPredicted RBP19.44■□□□□ 0.7
HERC2-207ENST00000564734 NOB1Q9ULX3 412 aaKnown RBP19.44■□□□□ 0.7
HERC2-207ENST00000564734 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.43■□□□□ 0.7
HERC2-207ENST00000564734 DDX19BQ9UMR2 479 aa19.43■□□□□ 0.7
HERC2-207ENST00000564734 FBLN1P23142 703 aa19.42■□□□□ 0.7
HERC2-207ENST00000564734 PPIP5K1Q6PFW1 1433 aa19.42■□□□□ 0.7
HERC2-207ENST00000564734 ALDH1L2Q3SY69 923 aa19.42■□□□□ 0.7
HERC2-207ENST00000564734 EDC4Q6P2E9 1401 aaKnown RBP19.41■□□□□ 0.7
HERC2-207ENST00000564734 WASLO00401 505 aaPredicted RBP19.41■□□□□ 0.7
HERC2-207ENST00000564734 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
HERC2-207ENST00000564734 METP08581 1390 aa19.41■□□□□ 0.7
HERC2-207ENST00000564734 BRPF1P55201 1214 aaPredicted RBP19.4■□□□□ 0.7
HERC2-207ENST00000564734 TMEM57Q8N5G2 664 aa19.39■□□□□ 0.69
HERC2-207ENST00000564734 TBC1D32Q96NH3 1257 aa19.39■□□□□ 0.69
HERC2-207ENST00000564734 ZBTB40Q9NUA8 1239 aa19.39■□□□□ 0.69
HERC2-207ENST00000564734 KIF16BQ96L93 1317 aa19.39■□□□□ 0.69
HERC2-207ENST00000564734 ITPRIPQ8IWB1 547 aa19.39■□□□□ 0.69
HERC2-207ENST00000564734 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.69
HERC2-207ENST00000564734 IL13P35225 146 aa19.38■□□□□ 0.69
HERC2-207ENST00000564734 SIRT1Q96EB6 747 aa19.38■□□□□ 0.69
HERC2-207ENST00000564734 NFE2L2Q16236 605 aa19.38■□□□□ 0.69
HERC2-207ENST00000564734 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.38■□□□□ 0.69
HERC2-207ENST00000564734 PHACTR3Q96KR7 559 aa19.38■□□□□ 0.69
HERC2-207ENST00000564734 MAP2P11137 1827 aaKnown RBP19.38■□□□□ 0.69
HERC2-207ENST00000564734 SMC5Q8IY18 1101 aa19.38■□□□□ 0.69
HERC2-207ENST00000564734 TECPR2O15040 1411 aa19.37■□□□□ 0.69
HERC2-207ENST00000564734 CDK12Q9NYV4 1490 aaPredicted RBP19.37■□□□□ 0.69
HERC2-207ENST00000564734 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
HERC2-207ENST00000564734 IPO8O15397 1037 aaKnown RBP19.37■□□□□ 0.69
HERC2-207ENST00000564734 ZNF428Q96B54 188 aa19.37■□□□□ 0.69
HERC2-207ENST00000564734 EMILIN1Q9Y6C2 1016 aa19.36■□□□□ 0.69
HERC2-207ENST00000564734 FER1L4A9Z1Z3 1794 aa19.36■□□□□ 0.69
HERC2-207ENST00000564734 NME9Q86XW9 330 aa19.36■□□□□ 0.69
HERC2-207ENST00000564734 RIMS1Q86UR5 1692 aaKnown RBP19.36■□□□□ 0.69
HERC2-207ENST00000564734 TNRQ92752 1358 aa19.35■□□□□ 0.69
HERC2-207ENST00000564734 CPS1P31327 1500 aa19.35■□□□□ 0.69
HERC2-207ENST00000564734 MON2Q7Z3U7 1717 aa19.35■□□□□ 0.69
HERC2-207ENST00000564734 ZRANB1Q9UGI0 708 aa19.34■□□□□ 0.69
HERC2-207ENST00000564734 BECN1Q14457 450 aa19.34■□□□□ 0.69
HERC2-207ENST00000564734 GSE1Q14687 1217 aa19.34■□□□□ 0.69
HERC2-207ENST00000564734 HMOX1P09601 288 aa19.34■□□□□ 0.69
HERC2-207ENST00000564734 ZNF853P0CG23 659 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms