RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 RTEL1-TNFRSF6BF6WH68 1400 aa22.95■■□□□ 1.27
DENND4A-206ENST00000564674 TBC1D9Q6ZT07 1266 aa22.95■■□□□ 1.27
DENND4A-206ENST00000564674 ATAD2Q6PL18 1390 aa22.95■■□□□ 1.26
DENND4A-206ENST00000564674 TSPYL6Q8N831 410 aa22.95■■□□□ 1.26
DENND4A-206ENST00000564674 C14orf93Q9H972 538 aaKnown RBP22.94■■□□□ 1.26
DENND4A-206ENST00000564674 GLIPR1L2Q4G1C9 344 aa22.94■■□□□ 1.26
DENND4A-206ENST00000564674 MCTP1Q6DN14 999 aa22.93■■□□□ 1.26
DENND4A-206ENST00000564674 PRKAR2BP31323 418 aa22.93■■□□□ 1.26
DENND4A-206ENST00000564674 CEP152O94986 1710 aa22.93■■□□□ 1.26
DENND4A-206ENST00000564674 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
DENND4A-206ENST00000564674 ZNF518AQ6AHZ1 1483 aa22.91■■□□□ 1.26
DENND4A-206ENST00000564674 RBM10P98175 930 aaKnown RBP22.91■■□□□ 1.26
DENND4A-206ENST00000564674 C16orf71Q8IYS4 520 aaPredicted RBP22.91■■□□□ 1.26
DENND4A-206ENST00000564674 PLEKHF1Q96S99 279 aa22.91■■□□□ 1.26
DENND4A-206ENST00000564674 KIF2CQ99661 725 aa22.9■■□□□ 1.26
DENND4A-206ENST00000564674 NASPP49321 788 aaPredicted RBP22.9■■□□□ 1.26
DENND4A-206ENST00000564674 CD109Q6YHK3 1445 aa22.9■■□□□ 1.26
DENND4A-206ENST00000564674 K7ELQ4 463 aaPredicted RBP22.9■■□□□ 1.26
DENND4A-206ENST00000564674 CAVIN1Q6NZI2 390 aaKnown RBP22.9■■□□□ 1.26
DENND4A-206ENST00000564674 SPHKAPQ2M3C7 1700 aa22.89■■□□□ 1.26
DENND4A-206ENST00000564674 RBM25P49756 843 aaKnown RBP22.89■■□□□ 1.26
DENND4A-206ENST00000564674 RAB3GAP1Q15042 981 aa22.89■■□□□ 1.26
DENND4A-206ENST00000564674 FOXD4L6Q3SYB3 417 aaPredicted RBP22.89■■□□□ 1.26
DENND4A-206ENST00000564674 FOXD4L3Q6VB84 417 aaPredicted RBP22.89■■□□□ 1.26
DENND4A-206ENST00000564674 ZMYND15Q9H091 742 aa22.89■■□□□ 1.25
DENND4A-206ENST00000564674 PKP1Q13835 747 aa22.89■■□□□ 1.25
DENND4A-206ENST00000564674 ANP32BQ92688 251 aaKnown RBP22.89■■□□□ 1.25
DENND4A-206ENST00000564674 ABCA6Q8N139 1617 aa22.88■■□□□ 1.25
DENND4A-206ENST00000564674 FYB1O15117 783 aa22.88■■□□□ 1.25
DENND4A-206ENST00000564674 PHACTR3Q96KR7 559 aa22.88■■□□□ 1.25
DENND4A-206ENST00000564674 IQSEC2Q5JU85 1478 aa22.88■■□□□ 1.25
DENND4A-206ENST00000564674 VIRMAQ69YN4 1812 aaKnown RBP22.88■■□□□ 1.25
DENND4A-206ENST00000564674 GOLGA6L22H0YM25 854 aa22.88■■□□□ 1.25
DENND4A-206ENST00000564674 KIF16BQ96L93 1317 aa22.88■■□□□ 1.25
DENND4A-206ENST00000564674 DCTN1Q14203 1278 aa22.87■■□□□ 1.25
DENND4A-206ENST00000564674 NOL8Q76FK4 1167 aaKnown RBP22.87■■□□□ 1.25
DENND4A-206ENST00000564674 KIAA1211Q6ZU35 1233 aa22.86■■□□□ 1.25
DENND4A-206ENST00000564674 PKNOX2Q96KN3 472 aa22.86■■□□□ 1.25
DENND4A-206ENST00000564674 MPNDQ8N594 471 aa22.85■■□□□ 1.25
DENND4A-206ENST00000564674 ABCC1P33527 1531 aa22.85■■□□□ 1.25
DENND4A-206ENST00000564674 OTUD7AQ8TE49 926 aaPredicted RBP22.84■■□□□ 1.25
DENND4A-206ENST00000564674 RBM27Q9P2N5 1060 aaKnown RBP22.84■■□□□ 1.25
DENND4A-206ENST00000564674 BMP2KLQ5H9B9 411 aa22.84■■□□□ 1.25
DENND4A-206ENST00000564674 SNX21Q969T3 373 aa22.84■■□□□ 1.25
DENND4A-206ENST00000564674 PRAM1Q96QH2 718 aa22.84■■□□□ 1.25
DENND4A-206ENST00000564674 CABP1Q9NZU7 370 aa22.84■■□□□ 1.25
DENND4A-206ENST00000564674 A0A1W2PP64 1363 aa22.84■■□□□ 1.25
DENND4A-206ENST00000564674 FAM83GA6ND36 823 aa22.84■■□□□ 1.25
DENND4A-206ENST00000564674 SIRT2Q8IXJ6 389 aa22.84■■□□□ 1.25
DENND4A-206ENST00000564674 ZBTB7BO15156 539 aaPredicted RBP22.83■■□□□ 1.25
DENND4A-206ENST00000564674 SMARCA5O60264 1052 aaPredicted RBP22.83■■□□□ 1.25
DENND4A-206ENST00000564674 BAG4O95429 457 aaKnown RBP22.83■■□□□ 1.25
DENND4A-206ENST00000564674 DDIT3P35638 169 aa22.83■■□□□ 1.25
DENND4A-206ENST00000564674 MSNP26038 577 aaKnown RBP22.82■■□□□ 1.24
DENND4A-206ENST00000564674 SHPRHQ149N8 1683 aa22.82■■□□□ 1.24
DENND4A-206ENST00000564674 MAP3K4Q9Y6R4 1608 aa22.81■■□□□ 1.24
DENND4A-206ENST00000564674 CT47B1P0C2W7 299 aaPredicted RBP22.81■■□□□ 1.24
DENND4A-206ENST00000564674 FANCAO15360 1455 aa22.81■■□□□ 1.24
DENND4A-206ENST00000564674 PRPF40AO75400 957 aaKnown RBP22.81■■□□□ 1.24
DENND4A-206ENST00000564674 CALD1Q05682 793 aaKnown RBP22.8■■□□□ 1.24
DENND4A-206ENST00000564674 SKOR2Q2VWA4 1001 aaPredicted RBP22.8■■□□□ 1.24
DENND4A-206ENST00000564674 ANKRD36BQ8N2N9 1353 aa22.8■■□□□ 1.24
DENND4A-206ENST00000564674 KRT24Q2M2I5 525 aa22.8■■□□□ 1.24
DENND4A-206ENST00000564674 ZGPATQ8N5A5 531 aaKnown RBP22.8■■□□□ 1.24
DENND4A-206ENST00000564674 RNF214Q8ND24 703 aa22.79■■□□□ 1.24
DENND4A-206ENST00000564674 R3HCC1Q9Y3T6 440 aaKnown RBP22.79■■□□□ 1.24
DENND4A-206ENST00000564674 TERF2IPQ9NYB0 399 aa22.79■■□□□ 1.24
DENND4A-206ENST00000564674 PPIP5K1Q6PFW1 1433 aa22.79■■□□□ 1.24
DENND4A-206ENST00000564674 ZFYVE16Q7Z3T8 1539 aa22.78■■□□□ 1.24
DENND4A-206ENST00000564674 GSPT1P15170 499 aaKnown RBP22.78■■□□□ 1.24
DENND4A-206ENST00000564674 VAMP4O75379 141 aa22.78■■□□□ 1.24
DENND4A-206ENST00000564674 CDC45O75419 566 aa22.78■■□□□ 1.24
DENND4A-206ENST00000564674 C8orf58Q8NAV2 365 aa22.78■■□□□ 1.24
DENND4A-206ENST00000564674 FAM13BQ9NYF5 915 aa22.78■■□□□ 1.24
DENND4A-206ENST00000564674 ZRANB1Q9UGI0 708 aa22.78■■□□□ 1.24
DENND4A-206ENST00000564674 CIZ1Q9ULV3 898 aaPredicted RBP22.78■■□□□ 1.24
DENND4A-206ENST00000564674 EMILIN1Q9Y6C2 1016 aa22.78■■□□□ 1.24
DENND4A-206ENST00000564674 VGFO15240 615 aaPredicted RBP22.77■■□□□ 1.24
DENND4A-206ENST00000564674 RRP9O43818 475 aaKnown RBP22.77■■□□□ 1.24
DENND4A-206ENST00000564674 SOX12O15370 315 aa22.77■■□□□ 1.24
DENND4A-206ENST00000564674 ADGRL1O94910 1474 aa22.77■■□□□ 1.24
DENND4A-206ENST00000564674 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
DENND4A-206ENST00000564674 TWISTNBQ3B726 338 aaPredicted RBP22.76■■□□□ 1.23
DENND4A-206ENST00000564674 ZMYM3Q14202 1370 aa22.76■■□□□ 1.23
DENND4A-206ENST00000564674 MRPL50Q8N5N7 158 aaKnown RBP22.75■■□□□ 1.23
DENND4A-206ENST00000564674 SBNO2Q9Y2G9 1366 aa22.75■■□□□ 1.23
DENND4A-206ENST00000564674 MBIPQ9NS73 344 aa22.75■■□□□ 1.23
DENND4A-206ENST00000564674 GCC1Q96CN9 775 aa22.75■■□□□ 1.23
DENND4A-206ENST00000564674 TSHZ3Q63HK5 1081 aa22.74■■□□□ 1.23
DENND4A-206ENST00000564674 HDGFL2Q7Z4V5 671 aaPredicted RBP22.74■■□□□ 1.23
DENND4A-206ENST00000564674 ATP7AQ04656 1500 aa22.74■■□□□ 1.23
DENND4A-206ENST00000564674 RAPGEF3O95398 923 aa22.74■■□□□ 1.23
DENND4A-206ENST00000564674 IDI1Q13907 227 aa22.74■■□□□ 1.23
DENND4A-206ENST00000564674 AK9Q5TCS8 1911 aa22.73■■□□□ 1.23
DENND4A-206ENST00000564674 CCDC173Q0VFZ6 552 aa22.73■■□□□ 1.23
DENND4A-206ENST00000564674 CDK19Q9BWU1 502 aa22.73■■□□□ 1.23
DENND4A-206ENST00000564674 ABCC11Q96J66 1382 aa22.72■■□□□ 1.23
DENND4A-206ENST00000564674 PRIM1P49642 420 aaKnown RBP22.72■■□□□ 1.23
DENND4A-206ENST00000564674 RBSNQ9H1K0 784 aa22.72■■□□□ 1.23
DENND4A-206ENST00000564674 STAG3Q9UJ98 1225 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms