RNA–Protein interactions for RNA: ENST00000564342.5

NSMCE1-207, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-207ENST00000564342 TNS3Q68CZ2 1445 aa11.8□□□□□ -0.52
NSMCE1-207ENST00000564342 MYCNP04198 464 aaPredicted RBP11.8□□□□□ -0.52
NSMCE1-207ENST00000564342 KRT28Q7Z3Y7 464 aa11.8□□□□□ -0.52
NSMCE1-207ENST00000564342 PMFBP1Q8TBY8 1022 aa11.8□□□□□ -0.52
NSMCE1-207ENST00000564342 ALS2Q96Q42 1657 aa11.8□□□□□ -0.52
NSMCE1-207ENST00000564342 CENPJQ9HC77 1338 aaPredicted RBP11.8□□□□□ -0.52
NSMCE1-207ENST00000564342 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
NSMCE1-207ENST00000564342 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
NSMCE1-207ENST00000564342 RALGAPBQ86X10 1494 aa11.79□□□□□ -0.52
NSMCE1-207ENST00000564342 C19orf67A6NJJ6 358 aa11.79□□□□□ -0.52
NSMCE1-207ENST00000564342 CDK19Q9BWU1 502 aa11.79□□□□□ -0.52
NSMCE1-207ENST00000564342 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
NSMCE1-207ENST00000564342 PSME1Q06323 249 aa11.78□□□□□ -0.52
NSMCE1-207ENST00000564342 NUDT16Q96DE0 195 aaKnown RBP11.78□□□□□ -0.52
NSMCE1-207ENST00000564342 AFF2P51816 1311 aa11.78□□□□□ -0.52
NSMCE1-207ENST00000564342 CRYBG1Q9Y4K1 1723 aa11.77□□□□□ -0.52
NSMCE1-207ENST00000564342 ADAMTS2O95450 1211 aa11.77□□□□□ -0.53
NSMCE1-207ENST00000564342 ZNF772Q68DY9 489 aaPredicted RBP11.77□□□□□ -0.53
NSMCE1-207ENST00000564342 C8orf37Q96NL8 207 aa11.77□□□□□ -0.53
NSMCE1-207ENST00000564342 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.53
NSMCE1-207ENST00000564342 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
NSMCE1-207ENST00000564342 POLR3AO14802 1390 aaPredicted RBP11.75□□□□□ -0.53
NSMCE1-207ENST00000564342 ARHGEF10O15013 1369 aa11.75□□□□□ -0.53
NSMCE1-207ENST00000564342 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.74□□□□□ -0.53
NSMCE1-207ENST00000564342 NGDNQ8NEJ9 315 aaKnown RBP11.74□□□□□ -0.53
NSMCE1-207ENST00000564342 NGLY1Q96IV0 654 aa11.74□□□□□ -0.53
NSMCE1-207ENST00000564342 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
NSMCE1-207ENST00000564342 PLEKHG3A1L390 1219 aa11.73□□□□□ -0.53
NSMCE1-207ENST00000564342 SRPK2P78362 688 aaKnown RBP11.73□□□□□ -0.53
NSMCE1-207ENST00000564342 PLCH1Q4KWH8 1693 aa11.73□□□□□ -0.53
NSMCE1-207ENST00000564342 PPIP5K1Q6PFW1 1433 aa11.73□□□□□ -0.53
NSMCE1-207ENST00000564342 FNBP4Q8N3X1 1017 aaPredicted RBP11.73□□□□□ -0.53
NSMCE1-207ENST00000564342 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
NSMCE1-207ENST00000564342 PHRF1Q9P1Y6 1649 aaKnown RBP11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 SBNO2Q9Y2G9 1366 aa11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 ACEP12821 1306 aa11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 CLSPNQ9HAW4 1339 aa11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 LMOD2Q6P5Q4 547 aa11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 CABLES1Q8TDN4 633 aa11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 AKAP12Q02952 1782 aa11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 NWD2Q9ULI1 1742 aa11.72□□□□□ -0.53
NSMCE1-207ENST00000564342 SLIT2O94813 1529 aa11.71□□□□□ -0.53
NSMCE1-207ENST00000564342 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
NSMCE1-207ENST00000564342 CDK12Q9NYV4 1490 aaPredicted RBP11.71□□□□□ -0.53
NSMCE1-207ENST00000564342 EVC2Q86UK5 1308 aa11.71□□□□□ -0.53
NSMCE1-207ENST00000564342 USP21Q9UK80 565 aa11.71□□□□□ -0.53
NSMCE1-207ENST00000564342 RXRBP28702 533 aa11.7□□□□□ -0.54
NSMCE1-207ENST00000564342 ATRNO75882 1429 aa11.69□□□□□ -0.54
NSMCE1-207ENST00000564342 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
NSMCE1-207ENST00000564342 PLEKHG5O94827 1062 aa11.69□□□□□ -0.54
NSMCE1-207ENST00000564342 QTRT2Q9H974 415 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-207ENST00000564342 COL14A1Q05707 1796 aaKnown RBP11.69□□□□□ -0.54
NSMCE1-207ENST00000564342 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-207ENST00000564342 HAP1P54257 671 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-207ENST00000564342 RBM6P78332 1123 aaKnown RBP11.68□□□□□ -0.54
NSMCE1-207ENST00000564342 TRPC5Q9UL62 973 aaPredicted RBP11.68□□□□□ -0.54
NSMCE1-207ENST00000564342 RGS12O14924 1447 aa11.68□□□□□ -0.54
NSMCE1-207ENST00000564342 NRKQ7Z2Y5 1582 aa11.67□□□□□ -0.54
NSMCE1-207ENST00000564342 MON2Q7Z3U7 1717 aa11.67□□□□□ -0.54
NSMCE1-207ENST00000564342 CABP1Q9NZU7 370 aa11.67□□□□□ -0.54
NSMCE1-207ENST00000564342 TIMELESSQ9UNS1 1208 aa11.67□□□□□ -0.54
NSMCE1-207ENST00000564342 USP6P35125 1406 aa11.67□□□□□ -0.54
NSMCE1-207ENST00000564342 GLI3P10071 1580 aa11.67□□□□□ -0.54
NSMCE1-207ENST00000564342 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
NSMCE1-207ENST00000564342 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
NSMCE1-207ENST00000564342 SSH2Q76I76 1423 aa11.66□□□□□ -0.54
NSMCE1-207ENST00000564342 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
NSMCE1-207ENST00000564342 UNC5CLQ8IV45 518 aa11.65□□□□□ -0.54
NSMCE1-207ENST00000564342 FAM83GA6ND36 823 aa11.64□□□□□ -0.55
NSMCE1-207ENST00000564342 NUTM2GQ5VZR2 741 aa11.64□□□□□ -0.55
NSMCE1-207ENST00000564342 TESK2Q96S53 571 aa11.64□□□□□ -0.55
NSMCE1-207ENST00000564342 USP19O94966 1318 aa11.63□□□□□ -0.55
NSMCE1-207ENST00000564342 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
NSMCE1-207ENST00000564342 ST20-MTHFSA0A0A6YYL1 179 aa11.63□□□□□ -0.55
NSMCE1-207ENST00000564342 ABTB2Q8N961 1025 aa11.63□□□□□ -0.55
NSMCE1-207ENST00000564342 GJD4Q96KN9 370 aaPredicted RBP11.63□□□□□ -0.55
NSMCE1-207ENST00000564342 SLIT3O75094 1523 aa11.63□□□□□ -0.55
NSMCE1-207ENST00000564342 CD163L1Q9NR16 1453 aa11.63□□□□□ -0.55
NSMCE1-207ENST00000564342 CCER1Q8TC90 406 aaPredicted RBP11.62□□□□□ -0.55
NSMCE1-207ENST00000564342 KIAA0232Q92628 1395 aa11.62□□□□□ -0.55
NSMCE1-207ENST00000564342 USP47Q96K76 1375 aa11.62□□□□□ -0.55
NSMCE1-207ENST00000564342 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
NSMCE1-207ENST00000564342 LMO7Q8WWI1 1683 aa11.62□□□□□ -0.55
NSMCE1-207ENST00000564342 BRWD3Q6RI45 1802 aa11.61□□□□□ -0.55
NSMCE1-207ENST00000564342 VPS72Q15906 364 aa11.61□□□□□ -0.55
NSMCE1-207ENST00000564342 ZNF692Q9BU19 519 aaPredicted RBP11.61□□□□□ -0.55
NSMCE1-207ENST00000564342 KTN1Q86UP2 1357 aaKnown RBP11.6□□□□□ -0.55
NSMCE1-207ENST00000564342 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
NSMCE1-207ENST00000564342 PUS7Q96PZ0 661 aaKnown RBP11.6□□□□□ -0.55
NSMCE1-207ENST00000564342 PRDM11Q9NQV5 511 aa11.6□□□□□ -0.55
NSMCE1-207ENST00000564342 BTG4Q9NY30 223 aa11.6□□□□□ -0.55
NSMCE1-207ENST00000564342 TTC21BQ7Z4L5 1316 aa11.6□□□□□ -0.55
NSMCE1-207ENST00000564342 CPDO75976 1380 aa11.59□□□□□ -0.55
NSMCE1-207ENST00000564342 ZC3H6P61129 1189 aaKnown RBP11.59□□□□□ -0.55
NSMCE1-207ENST00000564342 TTC21AQ8NDW8 1320 aa11.59□□□□□ -0.55
NSMCE1-207ENST00000564342 GCP02774 474 aa11.58□□□□□ -0.56
NSMCE1-207ENST00000564342 NLRP6P59044 892 aa11.58□□□□□ -0.56
NSMCE1-207ENST00000564342 CHRNA2Q15822 529 aa11.58□□□□□ -0.56
NSMCE1-207ENST00000564342 UPF1Q92900 1129 aaKnown RBP eCLIP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms