RNA–Protein interactions for RNA: ENST00000564201.1

NR4A1-220, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-220ENST00000564201 AKAP12Q02952 1782 aa16.46■□□□□ 0.23
NR4A1-220ENST00000564201 CPSF1Q10570 1443 aaKnown RBP16.46■□□□□ 0.23
NR4A1-220ENST00000564201 ANKRD36BQ8N2N9 1353 aa16.46■□□□□ 0.23
NR4A1-220ENST00000564201 NHSL1Q5SYE7 1610 aa16.45■□□□□ 0.22
NR4A1-220ENST00000564201 LMOD2Q6P5Q4 547 aa16.45■□□□□ 0.22
NR4A1-220ENST00000564201 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.45■□□□□ 0.22
NR4A1-220ENST00000564201 PHLPP1O60346 1717 aa16.45■□□□□ 0.22
NR4A1-220ENST00000564201 USP6P35125 1406 aa16.45■□□□□ 0.22
NR4A1-220ENST00000564201 FBXO41Q8TF61 875 aa16.44■□□□□ 0.22
NR4A1-220ENST00000564201 CARD14Q9BXL6 1004 aa16.43■□□□□ 0.22
NR4A1-220ENST00000564201 AHDC1Q5TGY3 1603 aaPredicted RBP16.43■□□□□ 0.22
NR4A1-220ENST00000564201 SOS2Q07890 1332 aaPredicted RBP16.43■□□□□ 0.22
NR4A1-220ENST00000564201 PXDNQ92626 1479 aa16.42■□□□□ 0.22
NR4A1-220ENST00000564201 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
NR4A1-220ENST00000564201 PLEKHG5O94827 1062 aa16.42■□□□□ 0.22
NR4A1-220ENST00000564201 HSPA1LP34931 641 aa16.42■□□□□ 0.22
NR4A1-220ENST00000564201 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
NR4A1-220ENST00000564201 NSD3Q9BZ95 1437 aa16.41■□□□□ 0.22
NR4A1-220ENST00000564201 EDC4Q6P2E9 1401 aaKnown RBP16.4■□□□□ 0.22
NR4A1-220ENST00000564201 CNGB1Q14028 1251 aaPredicted RBP16.4■□□□□ 0.22
NR4A1-220ENST00000564201 NUTM2GQ5VZR2 741 aa16.4■□□□□ 0.22
NR4A1-220ENST00000564201 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
NR4A1-220ENST00000564201 ABTB2Q8N961 1025 aa16.39■□□□□ 0.21
NR4A1-220ENST00000564201 LRRC59Q96AG4 307 aaKnown RBP16.39■□□□□ 0.21
NR4A1-220ENST00000564201 KNSTRNQ9Y448 316 aa16.39■□□□□ 0.21
NR4A1-220ENST00000564201 SPATA31A3Q5VYP0 1347 aa16.39■□□□□ 0.21
NR4A1-220ENST00000564201 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
NR4A1-220ENST00000564201 COL16A1Q07092 1604 aaPredicted RBP16.38■□□□□ 0.21
NR4A1-220ENST00000564201 SSH2Q76I76 1423 aa16.38■□□□□ 0.21
NR4A1-220ENST00000564201 NME9Q86XW9 330 aa16.38■□□□□ 0.21
NR4A1-220ENST00000564201 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
NR4A1-220ENST00000564201 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
NR4A1-220ENST00000564201 TNS3Q68CZ2 1445 aa16.37■□□□□ 0.21
NR4A1-220ENST00000564201 ZRANB1Q9UGI0 708 aa16.37■□□□□ 0.21
NR4A1-220ENST00000564201 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
NR4A1-220ENST00000564201 NLRP6P59044 892 aa16.36■□□□□ 0.21
NR4A1-220ENST00000564201 GGNBP2Q9H3C7 697 aa16.36■□□□□ 0.21
NR4A1-220ENST00000564201 CGNL1Q0VF96 1302 aa16.36■□□□□ 0.21
NR4A1-220ENST00000564201 PER1O15534 1290 aaPredicted RBP16.35■□□□□ 0.21
NR4A1-220ENST00000564201 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
NR4A1-220ENST00000564201 FYB1O15117 783 aa16.34■□□□□ 0.21
NR4A1-220ENST00000564201 ARHGEF10O15013 1369 aa16.34■□□□□ 0.21
NR4A1-220ENST00000564201 PIK3C2AO00443 1686 aa16.34■□□□□ 0.21
NR4A1-220ENST00000564201 CC2D1BQ5T0F9 858 aaKnown RBP16.33■□□□□ 0.2
NR4A1-220ENST00000564201 NLRP13Q86W25 1043 aa16.33■□□□□ 0.2
NR4A1-220ENST00000564201 CABLES1Q8TDN4 633 aa16.33■□□□□ 0.2
NR4A1-220ENST00000564201 KIF20BQ96Q89 1820 aa16.33■□□□□ 0.2
NR4A1-220ENST00000564201 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
NR4A1-220ENST00000564201 SOX12O15370 315 aa16.32■□□□□ 0.2
NR4A1-220ENST00000564201 PNPLA6Q8IY17 1366 aa16.32■□□□□ 0.2
NR4A1-220ENST00000564201 COG3Q96JB2 828 aa16.32■□□□□ 0.2
NR4A1-220ENST00000564201 JCADQ9P266 1359 aa16.31■□□□□ 0.2
NR4A1-220ENST00000564201 HAP1P54257 671 aaPredicted RBP16.31■□□□□ 0.2
NR4A1-220ENST00000564201 AMER1Q5JTC6 1135 aaPredicted RBP16.31■□□□□ 0.2
NR4A1-220ENST00000564201 NUTM2BA6NNL0 878 aaPredicted RBP16.3■□□□□ 0.2
NR4A1-220ENST00000564201 NUTM2EB1AL46 878 aaPredicted RBP16.3■□□□□ 0.2
NR4A1-220ENST00000564201 NUTM2AQ8IVF1 878 aaPredicted RBP16.3■□□□□ 0.2
NR4A1-220ENST00000564201 TNNT2P45379 298 aaPredicted RBP16.29■□□□□ 0.2
NR4A1-220ENST00000564201 USP31Q70CQ4 1352 aa16.28■□□□□ 0.2
NR4A1-220ENST00000564201 MORC1Q86VD1 984 aa16.28■□□□□ 0.2
NR4A1-220ENST00000564201 SHPRHQ149N8 1683 aa16.27■□□□□ 0.2
NR4A1-220ENST00000564201 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.2
NR4A1-220ENST00000564201 MARF1Q9Y4F3 1742 aaKnown RBP16.27■□□□□ 0.19
NR4A1-220ENST00000564201 OVOS2A0A0J9YW53 1432 aa16.27■□□□□ 0.19
NR4A1-220ENST00000564201 OVOS2Q6IE36 1432 aa16.27■□□□□ 0.19
NR4A1-220ENST00000564201 NSD2O96028 1365 aa16.26■□□□□ 0.19
NR4A1-220ENST00000564201 MED1Q15648 1581 aaPredicted RBP16.26■□□□□ 0.19
NR4A1-220ENST00000564201 USP19O94966 1318 aa16.26■□□□□ 0.19
NR4A1-220ENST00000564201 GCP02774 474 aa16.26■□□□□ 0.19
NR4A1-220ENST00000564201 FBLN1P23142 703 aa16.26■□□□□ 0.19
NR4A1-220ENST00000564201 ZC3H6P61129 1189 aaKnown RBP16.25■□□□□ 0.19
NR4A1-220ENST00000564201 COL22A1Q8NFW1 1626 aaPredicted RBP16.25■□□□□ 0.19
NR4A1-220ENST00000564201 ANKRD26Q9UPS8 1709 aa16.25■□□□□ 0.19
NR4A1-220ENST00000564201 PHRF1Q9P1Y6 1649 aaKnown RBP16.24■□□□□ 0.19
NR4A1-220ENST00000564201 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
NR4A1-220ENST00000564201 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
NR4A1-220ENST00000564201 NPC1L1Q9UHC9 1359 aa16.24■□□□□ 0.19
NR4A1-220ENST00000564201 SPATA31A6Q5VVP1 1343 aa16.23■□□□□ 0.19
NR4A1-220ENST00000564201 ABCA3Q99758 1704 aa16.23■□□□□ 0.19
NR4A1-220ENST00000564201 CRYBG1Q9Y4K1 1723 aa16.23■□□□□ 0.19
NR4A1-220ENST00000564201 USP54Q70EL1 1684 aa16.23■□□□□ 0.19
NR4A1-220ENST00000564201 SLIT3O75094 1523 aa16.23■□□□□ 0.19
NR4A1-220ENST00000564201 RRS1Q15050 365 aaKnown RBP16.21■□□□□ 0.19
NR4A1-220ENST00000564201 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.19
NR4A1-220ENST00000564201 PPM1GO15355 546 aaPredicted RBP16.2■□□□□ 0.18
NR4A1-220ENST00000564201 CHRNA2Q15822 529 aa16.2■□□□□ 0.18
NR4A1-220ENST00000564201 MEX3CQ5U5Q3 659 aaKnown RBP16.2■□□□□ 0.18
NR4A1-220ENST00000564201 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
NR4A1-220ENST00000564201 ANP32CO43423 234 aa16.19■□□□□ 0.18
NR4A1-220ENST00000564201 PRDM11Q9NQV5 511 aa16.19■□□□□ 0.18
NR4A1-220ENST00000564201 NFAT5O94916 1531 aa16.19■□□□□ 0.18
NR4A1-220ENST00000564201 MAP2P11137 1827 aaKnown RBP16.18■□□□□ 0.18
NR4A1-220ENST00000564201 EMILIN1Q9Y6C2 1016 aa16.18■□□□□ 0.18
NR4A1-220ENST00000564201 LRP6O75581 1613 aa16.18■□□□□ 0.18
NR4A1-220ENST00000564201 MAP3K19Q56UN5 1328 aa16.18■□□□□ 0.18
NR4A1-220ENST00000564201 PARD3Q8TEW0 1356 aa16.17■□□□□ 0.18
NR4A1-220ENST00000564201 AMPHP49418 695 aa16.17■□□□□ 0.18
NR4A1-220ENST00000564201 RALBP1Q15311 655 aa16.17■□□□□ 0.18
NR4A1-220ENST00000564201 ARHGEF25Q86VW2 580 aa16.17■□□□□ 0.18
NR4A1-220ENST00000564201 C8orf37Q96NL8 207 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms