RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 NLRP1Q9C000 1473 aa14.73□□□□□ -0.05
ABCA3-203ENST00000563623 CT47B1P0C2W7 299 aaPredicted RBP14.73□□□□□ -0.05
ABCA3-203ENST00000563623 SMC5Q8IY18 1101 aa14.73□□□□□ -0.05
ABCA3-203ENST00000563623 ZBTB40Q9NUA8 1239 aa14.72□□□□□ -0.05
ABCA3-203ENST00000563623 PRAM1Q96QH2 718 aa14.72□□□□□ -0.05
ABCA3-203ENST00000563623 CEP152O94986 1710 aa14.72□□□□□ -0.05
ABCA3-203ENST00000563623 ATP7AQ04656 1500 aa14.72□□□□□ -0.05
ABCA3-203ENST00000563623 ABCA6Q8N139 1617 aa14.72□□□□□ -0.05
ABCA3-203ENST00000563623 RBM10P98175 930 aaKnown RBP14.71□□□□□ -0.05
ABCA3-203ENST00000563623 CHD1O14646 1710 aa14.71□□□□□ -0.05
ABCA3-203ENST00000563623 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.06
ABCA3-203ENST00000563623 ZNF518AQ6AHZ1 1483 aa14.71□□□□□ -0.06
ABCA3-203ENST00000563623 NUCB1Q02818 461 aa14.71□□□□□ -0.06
ABCA3-203ENST00000563623 DDX49Q9Y6V7 483 aaKnown RBP14.71□□□□□ -0.06
ABCA3-203ENST00000563623 MAP3K4Q9Y6R4 1608 aa14.7□□□□□ -0.06
ABCA3-203ENST00000563623 ANKRD36BQ8N2N9 1353 aa14.7□□□□□ -0.06
ABCA3-203ENST00000563623 FYB1O15117 783 aa14.7□□□□□ -0.06
ABCA3-203ENST00000563623 CABP1Q9NZU7 370 aa14.7□□□□□ -0.06
ABCA3-203ENST00000563623 FSD2A1L4K1 749 aa14.69□□□□□ -0.06
ABCA3-203ENST00000563623 ESPNB1AK53 854 aa14.69□□□□□ -0.06
ABCA3-203ENST00000563623 SBNO2Q9Y2G9 1366 aa14.69□□□□□ -0.06
ABCA3-203ENST00000563623 TET3O43151 1660 aa14.69□□□□□ -0.06
ABCA3-203ENST00000563623 SSFA2P28290 1259 aa14.68□□□□□ -0.06
ABCA3-203ENST00000563623 FOXD4L5Q5VV16 416 aaPredicted RBP14.68□□□□□ -0.06
ABCA3-203ENST00000563623 FOXD4L4Q8WXT5 416 aaPredicted RBP14.68□□□□□ -0.06
ABCA3-203ENST00000563623 ZCCHC11Q5TAX3 1644 aaKnown RBP14.68□□□□□ -0.06
ABCA3-203ENST00000563623 MYOM2P54296 1465 aa14.68□□□□□ -0.06
ABCA3-203ENST00000563623 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
ABCA3-203ENST00000563623 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
ABCA3-203ENST00000563623 TSPYL6Q8N831 410 aa14.67□□□□□ -0.06
ABCA3-203ENST00000563623 RAPGEF3O95398 923 aa14.67□□□□□ -0.06
ABCA3-203ENST00000563623 K7ELQ4 463 aaPredicted RBP14.66□□□□□ -0.06
ABCA3-203ENST00000563623 PLEKHF1Q96S99 279 aa14.66□□□□□ -0.06
ABCA3-203ENST00000563623 CHMP4BQ9H444 224 aaKnown RBP14.66□□□□□ -0.06
ABCA3-203ENST00000563623 CD2BP2O95400 341 aaKnown RBP14.66□□□□□ -0.06
ABCA3-203ENST00000563623 TPRNQ4KMQ1 711 aa14.66□□□□□ -0.06
ABCA3-203ENST00000563623 IDI1Q13907 227 aa14.66□□□□□ -0.06
ABCA3-203ENST00000563623 KIF1BO60333 1816 aa14.66□□□□□ -0.06
ABCA3-203ENST00000563623 CLCN1P35523 988 aa14.65□□□□□ -0.06
ABCA3-203ENST00000563623 SKOR2Q2VWA4 1001 aaPredicted RBP14.65□□□□□ -0.06
ABCA3-203ENST00000563623 MCTP1Q6DN14 999 aa14.65□□□□□ -0.06
ABCA3-203ENST00000563623 GAS2L3Q86XJ1 694 aa14.65□□□□□ -0.06
ABCA3-203ENST00000563623 SHROOM2Q13796 1616 aa14.65□□□□□ -0.06
ABCA3-203ENST00000563623 CDK19Q9BWU1 502 aa14.65□□□□□ -0.06
ABCA3-203ENST00000563623 SOX12O15370 315 aa14.65□□□□□ -0.06
ABCA3-203ENST00000563623 IQSEC2Q5JU85 1478 aa14.65□□□□□ -0.06
ABCA3-203ENST00000563623 RPGRIP1LQ68CZ1 1315 aa14.64□□□□□ -0.07
ABCA3-203ENST00000563623 BMP2KLQ5H9B9 411 aa14.64□□□□□ -0.07
ABCA3-203ENST00000563623 GAS2L2Q8NHY3 880 aa14.64□□□□□ -0.07
ABCA3-203ENST00000563623 RBM25P49756 843 aaKnown RBP14.64□□□□□ -0.07
ABCA3-203ENST00000563623 DCTN1Q14203 1278 aa14.64□□□□□ -0.07
ABCA3-203ENST00000563623 GCC1Q96CN9 775 aa14.64□□□□□ -0.07
ABCA3-203ENST00000563623 PHACTR3Q96KR7 559 aa14.64□□□□□ -0.07
ABCA3-203ENST00000563623 CDC45O75419 566 aa14.64□□□□□ -0.07
ABCA3-203ENST00000563623 TWISTNBQ3B726 338 aaPredicted RBP14.64□□□□□ -0.07
ABCA3-203ENST00000563623 NSD2O96028 1365 aa14.63□□□□□ -0.07
ABCA3-203ENST00000563623 ABCC11Q96J66 1382 aa14.63□□□□□ -0.07
ABCA3-203ENST00000563623 CD109Q6YHK3 1445 aa14.63□□□□□ -0.07
ABCA3-203ENST00000563623 CALD1Q05682 793 aaKnown RBP14.63□□□□□ -0.07
ABCA3-203ENST00000563623 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
ABCA3-203ENST00000563623 CIZ1Q9ULV3 898 aaPredicted RBP14.63□□□□□ -0.07
ABCA3-203ENST00000563623 ZMYM3Q14202 1370 aa14.63□□□□□ -0.07
ABCA3-203ENST00000563623 FCHSD2O94868 740 aa14.62□□□□□ -0.07
ABCA3-203ENST00000563623 NASPP49321 788 aaPredicted RBP14.62□□□□□ -0.07
ABCA3-203ENST00000563623 SNX21Q969T3 373 aa14.62□□□□□ -0.07
ABCA3-203ENST00000563623 VIRMAQ69YN4 1812 aaKnown RBP14.62□□□□□ -0.07
ABCA3-203ENST00000563623 NPATQ14207 1427 aa14.62□□□□□ -0.07
ABCA3-203ENST00000563623 IL16Q14005 1332 aa14.62□□□□□ -0.07
ABCA3-203ENST00000563623 GNAI1P63096 354 aa14.62□□□□□ -0.07
ABCA3-203ENST00000563623 NOL8Q76FK4 1167 aaKnown RBP14.62□□□□□ -0.07
ABCA3-203ENST00000563623 EMILIN1Q9Y6C2 1016 aa14.62□□□□□ -0.07
ABCA3-203ENST00000563623 ZBTB7CA1YPR0 619 aa14.61□□□□□ -0.07
ABCA3-203ENST00000563623 MSNP26038 577 aaKnown RBP14.61□□□□□ -0.07
ABCA3-203ENST00000563623 RAB3GAP1Q15042 981 aa14.61□□□□□ -0.07
ABCA3-203ENST00000563623 CAVIN1Q6NZI2 390 aaKnown RBP14.61□□□□□ -0.07
ABCA3-203ENST00000563623 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
ABCA3-203ENST00000563623 ATAD2Q6PL18 1390 aa14.61□□□□□ -0.07
ABCA3-203ENST00000563623 FAM83GA6ND36 823 aa14.61□□□□□ -0.07
ABCA3-203ENST00000563623 ZBTB7BO15156 539 aaPredicted RBP14.61□□□□□ -0.07
ABCA3-203ENST00000563623 C16orf71Q8IYS4 520 aaPredicted RBP14.61□□□□□ -0.07
ABCA3-203ENST00000563623 NFE2L2Q16236 605 aa14.6□□□□□ -0.07
ABCA3-203ENST00000563623 VAMP4O75379 141 aa14.6□□□□□ -0.07
ABCA3-203ENST00000563623 WAPLQ7Z5K2 1190 aa14.6□□□□□ -0.07
ABCA3-203ENST00000563623 SMARCA5O60264 1052 aaPredicted RBP14.6□□□□□ -0.07
ABCA3-203ENST00000563623 CASC1Q6TDU7 716 aa14.6□□□□□ -0.07
ABCA3-203ENST00000563623 MRPL50Q8N5N7 158 aaKnown RBP14.6□□□□□ -0.07
ABCA3-203ENST00000563623 PTMSP20962 102 aa14.59□□□□□ -0.07
ABCA3-203ENST00000563623 FOXD4L6Q3SYB3 417 aaPredicted RBP14.59□□□□□ -0.07
ABCA3-203ENST00000563623 FOXD4L3Q6VB84 417 aaPredicted RBP14.59□□□□□ -0.07
ABCA3-203ENST00000563623 MBIPQ9NS73 344 aa14.59□□□□□ -0.07
ABCA3-203ENST00000563623 SHPRHQ149N8 1683 aa14.59□□□□□ -0.07
ABCA3-203ENST00000563623 SLC4A10Q6U841 1118 aa14.59□□□□□ -0.07
ABCA3-203ENST00000563623 RRS1Q15050 365 aaKnown RBP14.59□□□□□ -0.07
ABCA3-203ENST00000563623 API5Q9BZZ5 524 aaKnown RBP14.59□□□□□ -0.07
ABCA3-203ENST00000563623 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.07
ABCA3-203ENST00000563623 ERBB4Q15303 1308 aa14.58□□□□□ -0.07
ABCA3-203ENST00000563623 QRICH2Q9H0J4 1663 aa14.58□□□□□ -0.07
ABCA3-203ENST00000563623 C8orf58Q8NAV2 365 aa14.58□□□□□ -0.08
ABCA3-203ENST00000563623 EFCAB6Q5THR3 1501 aa14.58□□□□□ -0.08
ABCA3-203ENST00000563623 BAG4O95429 457 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms