RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 YTHDC2Q9H6S0 1430 aaKnown RBP17.36■□□□□ 0.37
AC040174.1-201ENST00000563003 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
AC040174.1-201ENST00000563003 PDE3AQ14432 1141 aa17.35■□□□□ 0.37
AC040174.1-201ENST00000563003 COG6Q9Y2V7 657 aa17.35■□□□□ 0.37
AC040174.1-201ENST00000563003 TNRQ92752 1358 aa17.35■□□□□ 0.37
AC040174.1-201ENST00000563003 STK26Q9P289 416 aa17.35■□□□□ 0.37
AC040174.1-201ENST00000563003 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
AC040174.1-201ENST00000563003 PANK1Q8TE04 598 aa17.35■□□□□ 0.37
AC040174.1-201ENST00000563003 CARD14Q9BXL6 1004 aa17.35■□□□□ 0.37
AC040174.1-201ENST00000563003 GRPEL1Q9HAV7 217 aa17.34■□□□□ 0.37
AC040174.1-201ENST00000563003 APAF1O14727 1248 aa17.34■□□□□ 0.37
AC040174.1-201ENST00000563003 PTPRMP28827 1452 aa17.33■□□□□ 0.37
AC040174.1-201ENST00000563003 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
AC040174.1-201ENST00000563003 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
AC040174.1-201ENST00000563003 E9PSI1 815 aa17.33■□□□□ 0.36
AC040174.1-201ENST00000563003 CHMP5Q9NZZ3 219 aa17.33■□□□□ 0.36
AC040174.1-201ENST00000563003 HDGFP51858 240 aaKnown RBP17.32■□□□□ 0.36
AC040174.1-201ENST00000563003 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
AC040174.1-201ENST00000563003 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
AC040174.1-201ENST00000563003 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
AC040174.1-201ENST00000563003 CANXP27824 592 aaKnown RBP17.3■□□□□ 0.36
AC040174.1-201ENST00000563003 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
AC040174.1-201ENST00000563003 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
AC040174.1-201ENST00000563003 FER1L4A9Z1Z3 1794 aa17.3■□□□□ 0.36
AC040174.1-201ENST00000563003 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
AC040174.1-201ENST00000563003 PRAM1Q96QH2 718 aa17.3■□□□□ 0.36
AC040174.1-201ENST00000563003 UBR1Q8IWV7 1749 aa17.28■□□□□ 0.36
AC040174.1-201ENST00000563003 PLPPR3Q6T4P5 718 aa17.28■□□□□ 0.36
AC040174.1-201ENST00000563003 PDZRN3Q9UPQ7 1066 aa17.28■□□□□ 0.36
AC040174.1-201ENST00000563003 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
AC040174.1-201ENST00000563003 NSD3Q9BZ95 1437 aa17.28■□□□□ 0.36
AC040174.1-201ENST00000563003 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
AC040174.1-201ENST00000563003 PCDHB15Q9Y5E8 787 aa17.28■□□□□ 0.36
AC040174.1-201ENST00000563003 NINLQ9Y2I6 1382 aa17.27■□□□□ 0.36
AC040174.1-201ENST00000563003 TPM2P07951 284 aa17.27■□□□□ 0.36
AC040174.1-201ENST00000563003 TRIM44Q96DX7 344 aaPredicted RBP17.27■□□□□ 0.36
AC040174.1-201ENST00000563003 CABP2Q9NPB3 220 aa17.27■□□□□ 0.36
AC040174.1-201ENST00000563003 ISY1Q9ULR0 285 aaKnown RBP17.27■□□□□ 0.36
AC040174.1-201ENST00000563003 USP32Q8NFA0 1604 aa17.27■□□□□ 0.36
AC040174.1-201ENST00000563003 NRXN3Q9Y4C0 1643 aa17.26■□□□□ 0.35
AC040174.1-201ENST00000563003 ANKRD36BQ8N2N9 1353 aa17.26■□□□□ 0.35
AC040174.1-201ENST00000563003 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
AC040174.1-201ENST00000563003 PDCL3Q9H2J4 239 aa17.26■□□□□ 0.35
AC040174.1-201ENST00000563003 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
AC040174.1-201ENST00000563003 ABCC11Q96J66 1382 aa17.25■□□□□ 0.35
AC040174.1-201ENST00000563003 TMEM2Q9UHN6 1383 aa17.25■□□□□ 0.35
AC040174.1-201ENST00000563003 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
AC040174.1-201ENST00000563003 C22orf23Q9BZE7 217 aa17.24■□□□□ 0.35
AC040174.1-201ENST00000563003 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
AC040174.1-201ENST00000563003 C3P01024 1663 aa17.24■□□□□ 0.35
AC040174.1-201ENST00000563003 GAS2L3Q86XJ1 694 aa17.23■□□□□ 0.35
AC040174.1-201ENST00000563003 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
AC040174.1-201ENST00000563003 CEBPAP49715 358 aaPredicted RBP17.22■□□□□ 0.35
AC040174.1-201ENST00000563003 MORC1Q86VD1 984 aa17.21■□□□□ 0.35
AC040174.1-201ENST00000563003 RLBP1P12271 317 aa17.21■□□□□ 0.35
AC040174.1-201ENST00000563003 MFAP1P55081 439 aaKnown RBP17.21■□□□□ 0.35
AC040174.1-201ENST00000563003 AAMPQ13685 434 aa17.2■□□□□ 0.34
AC040174.1-201ENST00000563003 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
AC040174.1-201ENST00000563003 TNNQ9UQP3 1299 aa17.2■□□□□ 0.34
AC040174.1-201ENST00000563003 NSD2O96028 1365 aa17.2■□□□□ 0.34
AC040174.1-201ENST00000563003 METP08581 1390 aa17.2■□□□□ 0.34
AC040174.1-201ENST00000563003 KIAA1211Q6ZU35 1233 aa17.2■□□□□ 0.34
AC040174.1-201ENST00000563003 WAPLQ7Z5K2 1190 aa17.19■□□□□ 0.34
AC040174.1-201ENST00000563003 WWC1Q8IX03 1113 aa17.19■□□□□ 0.34
AC040174.1-201ENST00000563003 NGEFQ8N5V2 710 aa17.19■□□□□ 0.34
AC040174.1-201ENST00000563003 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
AC040174.1-201ENST00000563003 RWDD1Q9H446 243 aaPredicted RBP17.19■□□□□ 0.34
AC040174.1-201ENST00000563003 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
AC040174.1-201ENST00000563003 RARSP54136 660 aaKnown RBP17.18■□□□□ 0.34
AC040174.1-201ENST00000563003 HSCBQ8IWL3 235 aa17.18■□□□□ 0.34
AC040174.1-201ENST00000563003 TERF2IPQ9NYB0 399 aa17.18■□□□□ 0.34
AC040174.1-201ENST00000563003 A0A1W2PP64 1363 aa17.18■□□□□ 0.34
AC040174.1-201ENST00000563003 POLR3AO14802 1390 aaPredicted RBP17.18■□□□□ 0.34
AC040174.1-201ENST00000563003 DDIT3P35638 169 aa17.17■□□□□ 0.34
AC040174.1-201ENST00000563003 TECPR2O15040 1411 aa17.17■□□□□ 0.34
AC040174.1-201ENST00000563003 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
AC040174.1-201ENST00000563003 PLEKHG1Q9ULL1 1385 aa17.16■□□□□ 0.34
AC040174.1-201ENST00000563003 TNPO1Q92973 898 aaKnown RBP17.16■□□□□ 0.34
AC040174.1-201ENST00000563003 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
AC040174.1-201ENST00000563003 LTKP29376 864 aa17.14■□□□□ 0.33
AC040174.1-201ENST00000563003 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
AC040174.1-201ENST00000563003 TXNDC2Q86VQ3 553 aa17.14■□□□□ 0.33
AC040174.1-201ENST00000563003 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
AC040174.1-201ENST00000563003 CD163L1Q9NR16 1453 aa17.14■□□□□ 0.33
AC040174.1-201ENST00000563003 BCL2L13Q9BXK5 485 aa17.14■□□□□ 0.33
AC040174.1-201ENST00000563003 SLIT1O75093 1534 aa17.13■□□□□ 0.33
AC040174.1-201ENST00000563003 CPS1P31327 1500 aa17.13■□□□□ 0.33
AC040174.1-201ENST00000563003 HDGFL2Q7Z4V5 671 aaPredicted RBP17.13■□□□□ 0.33
AC040174.1-201ENST00000563003 NCOA3Q9Y6Q9 1424 aa17.13■□□□□ 0.33
AC040174.1-201ENST00000563003 ARHGAP23Q9P227 1491 aa17.12■□□□□ 0.33
AC040174.1-201ENST00000563003 TNNT2P45379 298 aaPredicted RBP17.12■□□□□ 0.33
AC040174.1-201ENST00000563003 OFD1O75665 1012 aa17.12■□□□□ 0.33
AC040174.1-201ENST00000563003 ZSCAN30Q86W11 494 aa17.12■□□□□ 0.33
AC040174.1-201ENST00000563003 CABP1Q9NZU7 370 aa17.12■□□□□ 0.33
AC040174.1-201ENST00000563003 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
AC040174.1-201ENST00000563003 CCDC173Q0VFZ6 552 aa17.11■□□□□ 0.33
AC040174.1-201ENST00000563003 SKOR2Q2VWA4 1001 aaPredicted RBP17.11■□□□□ 0.33
AC040174.1-201ENST00000563003 THEMISQ8N1K5 641 aaPredicted RBP17.11■□□□□ 0.33
AC040174.1-201ENST00000563003 GBP4Q96PP9 640 aa17.11■□□□□ 0.33
AC040174.1-201ENST00000563003 PPP1R9BQ96SB3 815 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms