RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 FER1L4A9Z1Z3 1794 aa27.76■■■□□ 2.04
VPS9D1-AS1-202ENST00000562866 DIAPH1O60610 1272 aaKnown RBP27.76■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 SLIT1O75093 1534 aa27.76■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 U2SURPO15042 1029 aaKnown RBP27.76■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.75■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 ARHGAP23Q9P227 1491 aa27.74■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 MAPK8IP3Q9UPT6 1336 aa27.74■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 TCERG1O14776 1098 aaKnown RBP27.73■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 LTKP29376 864 aa27.73■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 CEBPAP49715 358 aaPredicted RBP27.73■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 MYH16Q9H6N6 1097 aa27.73■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 ROBO2Q9HCK4 1378 aa27.73■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 PLEKHF1Q96S99 279 aa27.73■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 MON2Q7Z3U7 1717 aa27.72■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 ZNF692Q9BU19 519 aaPredicted RBP27.72■■■□□ 2.03
VPS9D1-AS1-202ENST00000562866 ITSN1Q15811 1721 aa27.69■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 AKAP12Q02952 1782 aa27.69■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 BCAR3O75815 825 aa27.69■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 PDE3AQ14432 1141 aa27.69■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 THEMISQ8N1K5 641 aaPredicted RBP27.68■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 AATKQ6ZMQ8 1374 aa27.68■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 MS4A1P11836 297 aa27.67■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 POLKQ9UBT6 870 aa27.67■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 TMPOP42166 694 aaKnown RBP27.66■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 DIP2AQ14689 1571 aa27.66■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 CENPQQ7L2Z9 268 aaPredicted RBP27.65■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 TBX22Q9Y458 520 aa27.65■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 FCHSD2O94868 740 aa27.65■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 CT47B1P0C2W7 299 aaPredicted RBP27.64■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 CANXP27824 592 aaKnown RBP27.64■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 COG3Q96JB2 828 aa27.64■■■□□ 2.02
VPS9D1-AS1-202ENST00000562866 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.63■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 IL16Q14005 1332 aa27.63■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 CDK12Q9NYV4 1490 aaPredicted RBP27.63■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 PRR36Q9H6K5 1346 aa27.63■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 RARSP54136 660 aaKnown RBP27.63■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 NME9Q86XW9 330 aa27.63■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 KDM2BQ8NHM5 1336 aa27.62■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 NEFMP07197 916 aa27.62■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 TOPAZ1Q8N9V7 1692 aa27.62■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 PTCH1Q13635 1447 aa27.6■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 PTPRUQ92729 1446 aa27.6■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 SLC26A8Q96RN1 970 aa27.6■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 MAP2P11137 1827 aaKnown RBP27.59■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 PLEKHG3A1L390 1219 aa27.59■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 PPM1GO15355 546 aaPredicted RBP27.58■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 TRIM35Q9UPQ4 493 aa27.58■■■□□ 2.01
VPS9D1-AS1-202ENST00000562866 AAMPQ13685 434 aa27.58■■■□□ 2
VPS9D1-AS1-202ENST00000562866 NCKAP5LQ9HCH0 1330 aa27.57■■■□□ 2
VPS9D1-AS1-202ENST00000562866 LRRC7Q96NW7 1537 aa27.57■■■□□ 2
VPS9D1-AS1-202ENST00000562866 AMOTL2Q9Y2J4 779 aa27.57■■■□□ 2
VPS9D1-AS1-202ENST00000562866 RIPK4P57078 832 aa27.56■■■□□ 2
VPS9D1-AS1-202ENST00000562866 RSPH6AQ9H0K4 717 aa27.55■■■□□ 2
VPS9D1-AS1-202ENST00000562866 PLPPR3Q6T4P5 718 aa27.55■■■□□ 2
VPS9D1-AS1-202ENST00000562866 NRKQ7Z2Y5 1582 aa27.55■■■□□ 2
VPS9D1-AS1-202ENST00000562866 EMILIN1Q9Y6C2 1016 aa27.53■■■□□ 2
VPS9D1-AS1-202ENST00000562866 IL13P35225 146 aa27.53■■■□□ 2
VPS9D1-AS1-202ENST00000562866 TTC21BQ7Z4L5 1316 aa27.52■■■□□ 2
VPS9D1-AS1-202ENST00000562866 PRKAR2BP31323 418 aa27.52■■■□□ 2
VPS9D1-AS1-202ENST00000562866 ZRANB1Q9UGI0 708 aa27.52■■■□□ 2
VPS9D1-AS1-202ENST00000562866 ACEP12821 1306 aa27.52■■■□□ 2
VPS9D1-AS1-202ENST00000562866 FRAT1Q92837 279 aaPredicted RBP27.51■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 USP6P35125 1406 aa27.5■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 CEP170BQ9Y4F5 1589 aaPredicted RBP27.5■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 FBLN1P23142 703 aa27.5■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 MYT1Q01538 1121 aa27.5■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 PIK3R4Q99570 1358 aa27.5■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 ANP32EQ9BTT0 268 aa27.49■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 ANP32AP39687 249 aaKnown RBP27.48■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 CALD1Q05682 793 aaKnown RBP27.48■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 XRN1Q8IZH2 1706 aaKnown RBP27.48■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 MSH5O43196 834 aa27.48■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 PDE4AP27815 886 aa27.48■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 NFE2L2Q16236 605 aa27.48■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 PANK1Q8TE04 598 aa27.48■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 CLUAP1Q96AJ1 413 aa27.47■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 TSR2Q969E8 191 aaKnown RBP27.46■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 OVOS2A0A0J9YW53 1432 aa27.46■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 OVOS2Q6IE36 1432 aa27.46■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 EXOSC9Q06265 439 aaKnown RBP27.45■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 BACH2Q9BYV9 841 aa27.45■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 COG6Q9Y2V7 657 aa27.45■■□□□ 1.99
VPS9D1-AS1-202ENST00000562866 TTC21AQ8NDW8 1320 aa27.45■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 RRS1Q15050 365 aaKnown RBP27.43■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 ZKSCAN2Q63HK3 967 aa27.43■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 RIMS1Q86UR5 1692 aaKnown RBP27.43■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 HMOX1P09601 288 aa27.43■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 SSH2Q76I76 1423 aa27.42■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 LMOD3Q0VAK6 560 aa27.42■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 ERICH6Q7L0X2 663 aa27.42■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 NALCNQ8IZF0 1738 aa27.41■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 ANKARQ7Z5J8 1434 aa27.41■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 NUTM2FA1L443 756 aa27.4■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 BCL2L13Q9BXK5 485 aa27.4■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 USP31Q70CQ4 1352 aa27.4■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 SMC4Q9NTJ3 1288 aa27.4■■□□□ 1.98
VPS9D1-AS1-202ENST00000562866 PMFBP1Q8TBY8 1022 aa27.38■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 ZNF428Q96B54 188 aa27.38■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 PHACTR3Q96KR7 559 aa27.38■■□□□ 1.97
VPS9D1-AS1-202ENST00000562866 ZNF142P52746 1687 aaPredicted RBP27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms