RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 PPIP5K1Q6PFW1 1433 aa23.08■■□□□ 1.28
PKD1-226ENST00000562425 ACEP12821 1306 aa23.08■■□□□ 1.28
PKD1-226ENST00000562425 EP400Q96L91 3159 aa23.07■■□□□ 1.28
PKD1-226ENST00000562425 USP47Q96K76 1375 aa23.07■■□□□ 1.28
PKD1-226ENST00000562425 TNS3Q68CZ2 1445 aa23.07■■□□□ 1.28
PKD1-226ENST00000562425 POLR3AO14802 1390 aaPredicted RBP23.06■■□□□ 1.28
PKD1-226ENST00000562425 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
PKD1-226ENST00000562425 CABP1Q9NZU7 370 aa23.06■■□□□ 1.28
PKD1-226ENST00000562425 PAK3O75914 559 aaPredicted RBP23.04■■□□□ 1.28
PKD1-226ENST00000562425 PUS7Q96PZ0 661 aaKnown RBP23.04■■□□□ 1.28
PKD1-226ENST00000562425 TESK2Q96S53 571 aa23.03■■□□□ 1.28
PKD1-226ENST00000562425 TOPAZ1Q8N9V7 1692 aa23.03■■□□□ 1.28
PKD1-226ENST00000562425 HAP1P54257 671 aaPredicted RBP23.02■■□□□ 1.28
PKD1-226ENST00000562425 BCL9LQ86UU0 1499 aa23.02■■□□□ 1.28
PKD1-226ENST00000562425 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.02■■□□□ 1.28
PKD1-226ENST00000562425 CCDC125Q86Z20 511 aa23.01■■□□□ 1.27
PKD1-226ENST00000562425 TMF1P82094 1093 aa23■■□□□ 1.27
PKD1-226ENST00000562425 ZNF692Q9BU19 519 aaPredicted RBP23■■□□□ 1.27
PKD1-226ENST00000562425 BRD4O60885 1362 aaPredicted RBP23■■□□□ 1.27
PKD1-226ENST00000562425 CDCA8Q53HL2 280 aa22.97■■□□□ 1.27
PKD1-226ENST00000562425 GJD4Q96KN9 370 aaPredicted RBP22.97■■□□□ 1.27
PKD1-226ENST00000562425 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.27
PKD1-226ENST00000562425 TMC1Q8TDI8 760 aa22.96■■□□□ 1.27
PKD1-226ENST00000562425 TRPM3Q9HCF6 1732 aaPredicted RBP22.96■■□□□ 1.27
PKD1-226ENST00000562425 CABLES1Q8TDN4 633 aa22.95■■□□□ 1.26
PKD1-226ENST00000562425 PLEKHG5O94827 1062 aa22.94■■□□□ 1.26
PKD1-226ENST00000562425 ABTB2Q8N961 1025 aa22.94■■□□□ 1.26
PKD1-226ENST00000562425 SLIT2O94813 1529 aa22.93■■□□□ 1.26
PKD1-226ENST00000562425 USP6P35125 1406 aa22.93■■□□□ 1.26
PKD1-226ENST00000562425 UNC5CLQ8IV45 518 aa22.93■■□□□ 1.26
PKD1-226ENST00000562425 ZRANB1Q9UGI0 708 aa22.93■■□□□ 1.26
PKD1-226ENST00000562425 HDGFL2Q7Z4V5 671 aaPredicted RBP22.92■■□□□ 1.26
PKD1-226ENST00000562425 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
PKD1-226ENST00000562425 NINLQ9Y2I6 1382 aa22.91■■□□□ 1.26
PKD1-226ENST00000562425 ALS2Q96Q42 1657 aa22.91■■□□□ 1.26
PKD1-226ENST00000562425 NLRP13Q86W25 1043 aa22.9■■□□□ 1.26
PKD1-226ENST00000562425 SLC12A5Q9H2X9 1139 aa22.9■■□□□ 1.26
PKD1-226ENST00000562425 CPSF1Q10570 1443 aaKnown RBP22.9■■□□□ 1.26
PKD1-226ENST00000562425 KTN1Q86UP2 1357 aaKnown RBP22.89■■□□□ 1.26
PKD1-226ENST00000562425 NUTM2GQ5VZR2 741 aa22.88■■□□□ 1.25
PKD1-226ENST00000562425 GLI3P10071 1580 aa22.88■■□□□ 1.25
PKD1-226ENST00000562425 HSPA5P11021 654 aaKnown RBP22.87■■□□□ 1.25
PKD1-226ENST00000562425 TTC21BQ7Z4L5 1316 aa22.86■■□□□ 1.25
PKD1-226ENST00000562425 TTC21AQ8NDW8 1320 aa22.86■■□□□ 1.25
PKD1-226ENST00000562425 BLMP54132 1417 aaPredicted RBP22.86■■□□□ 1.25
PKD1-226ENST00000562425 NWD2Q9ULI1 1742 aa22.85■■□□□ 1.25
PKD1-226ENST00000562425 SSH2Q76I76 1423 aa22.85■■□□□ 1.25
PKD1-226ENST00000562425 NLRP6P59044 892 aa22.85■■□□□ 1.25
PKD1-226ENST00000562425 VPS72Q15906 364 aa22.82■■□□□ 1.24
PKD1-226ENST00000562425 USP19O94966 1318 aa22.82■■□□□ 1.24
PKD1-226ENST00000562425 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
PKD1-226ENST00000562425 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
PKD1-226ENST00000562425 BRWD3Q6RI45 1802 aa22.81■■□□□ 1.24
PKD1-226ENST00000562425 PRDM11Q9NQV5 511 aa22.81■■□□□ 1.24
PKD1-226ENST00000562425 ABCA3Q99758 1704 aa22.81■■□□□ 1.24
PKD1-226ENST00000562425 CD163L1Q9NR16 1453 aa22.8■■□□□ 1.24
PKD1-226ENST00000562425 A0A1W2PP64 1363 aa22.8■■□□□ 1.24
PKD1-226ENST00000562425 FAM83GA6ND36 823 aa22.8■■□□□ 1.24
PKD1-226ENST00000562425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.8■■□□□ 1.24
PKD1-226ENST00000562425 GCP02774 474 aa22.79■■□□□ 1.24
PKD1-226ENST00000562425 EDC4Q6P2E9 1401 aaKnown RBP22.79■■□□□ 1.24
PKD1-226ENST00000562425 ONECUT3O60422 494 aaPredicted RBP22.78■■□□□ 1.24
PKD1-226ENST00000562425 ZC3H6P61129 1189 aaKnown RBP22.78■■□□□ 1.24
PKD1-226ENST00000562425 ANKRD36BQ8N2N9 1353 aa22.77■■□□□ 1.24
PKD1-226ENST00000562425 SF3B2Q13435 895 aaKnown RBP22.76■■□□□ 1.23
PKD1-226ENST00000562425 SEPT12Q8IYM1 358 aa22.76■■□□□ 1.23
PKD1-226ENST00000562425 KCNH5Q8NCM2 988 aa22.76■■□□□ 1.23
PKD1-226ENST00000562425 MON2Q7Z3U7 1717 aa22.76■■□□□ 1.23
PKD1-226ENST00000562425 KIAA0232Q92628 1395 aa22.76■■□□□ 1.23
PKD1-226ENST00000562425 CRYBG1Q9Y4K1 1723 aa22.75■■□□□ 1.23
PKD1-226ENST00000562425 POLR3GLQ9BT43 218 aa22.75■■□□□ 1.23
PKD1-226ENST00000562425 BTG4Q9NY30 223 aa22.74■■□□□ 1.23
PKD1-226ENST00000562425 CPDO75976 1380 aa22.74■■□□□ 1.23
PKD1-226ENST00000562425 NRKQ7Z2Y5 1582 aa22.73■■□□□ 1.23
PKD1-226ENST00000562425 PHRF1Q9P1Y6 1649 aaKnown RBP22.73■■□□□ 1.23
PKD1-226ENST00000562425 NME9Q86XW9 330 aa22.73■■□□□ 1.23
PKD1-226ENST00000562425 USP31Q70CQ4 1352 aa22.73■■□□□ 1.23
PKD1-226ENST00000562425 PIK3C2AO00443 1686 aa22.72■■□□□ 1.23
PKD1-226ENST00000562425 COL14A1Q05707 1796 aaKnown RBP22.72■■□□□ 1.23
PKD1-226ENST00000562425 CHRNA2Q15822 529 aa22.71■■□□□ 1.23
PKD1-226ENST00000562425 KRT27Q7Z3Y8 459 aa22.71■■□□□ 1.23
PKD1-226ENST00000562425 CCDC9Q9Y3X0 531 aaKnown RBP22.71■■□□□ 1.23
PKD1-226ENST00000562425 SLIT3O75094 1523 aa22.7■■□□□ 1.22
PKD1-226ENST00000562425 NRAPQ86VF7 1730 aa22.7■■□□□ 1.22
PKD1-226ENST00000562425 ZBTB7CA1YPR0 619 aa22.68■■□□□ 1.22
PKD1-226ENST00000562425 SOX12O15370 315 aa22.67■■□□□ 1.22
PKD1-226ENST00000562425 EVA1CP58658 441 aa22.67■■□□□ 1.22
PKD1-226ENST00000562425 DEFB132Q7Z7B7 95 aa22.67■■□□□ 1.22
PKD1-226ENST00000562425 COG3Q96JB2 828 aa22.67■■□□□ 1.22
PKD1-226ENST00000562425 AATKQ6ZMQ8 1374 aa22.65■■□□□ 1.22
PKD1-226ENST00000562425 LRP5O75197 1615 aa22.65■■□□□ 1.22
PKD1-226ENST00000562425 ARHGEF25Q86VW2 580 aa22.65■■□□□ 1.22
PKD1-226ENST00000562425 C11orf95C9JLR9 678 aaPredicted RBP22.64■■□□□ 1.21
PKD1-226ENST00000562425 STRN4Q9NRL3 753 aa22.64■■□□□ 1.21
PKD1-226ENST00000562425 FYB1O15117 783 aa22.63■■□□□ 1.21
PKD1-226ENST00000562425 BAG6P46379 1132 aa22.63■■□□□ 1.21
PKD1-226ENST00000562425 CARD14Q9BXL6 1004 aa22.63■■□□□ 1.21
PKD1-226ENST00000562425 A0A0G2JS52 829 aa22.62■■□□□ 1.21
PKD1-226ENST00000562425 MYT1Q01538 1121 aa22.62■■□□□ 1.21
PKD1-226ENST00000562425 OVOS2A0A0J9YW53 1432 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms