RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 BCL9LQ86UU0 1499 aa11.95□□□□□ -0.5
GINS3-204ENST00000561952 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.94□□□□□ -0.5
GINS3-204ENST00000561952 EIF3AQ14152 1382 aaKnown RBP11.94□□□□□ -0.5
GINS3-204ENST00000561952 NBPF1Q3BBV0 1214 aa11.94□□□□□ -0.5
GINS3-204ENST00000561952 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
GINS3-204ENST00000561952 ALS2Q96Q42 1657 aa11.94□□□□□ -0.5
GINS3-204ENST00000561952 EP400Q96L91 3159 aa11.93□□□□□ -0.5
GINS3-204ENST00000561952 SBNO1A3KN83 1393 aa11.93□□□□□ -0.5
GINS3-204ENST00000561952 PAK3O75914 559 aaPredicted RBP11.93□□□□□ -0.5
GINS3-204ENST00000561952 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
GINS3-204ENST00000561952 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
GINS3-204ENST00000561952 SIN3AQ96ST3 1273 aa11.93□□□□□ -0.5
GINS3-204ENST00000561952 ATP7BP35670 1465 aa11.93□□□□□ -0.5
GINS3-204ENST00000561952 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
GINS3-204ENST00000561952 ARHGEF10O15013 1369 aa11.92□□□□□ -0.5
GINS3-204ENST00000561952 GPRASP1Q5JY77 1395 aa11.92□□□□□ -0.5
GINS3-204ENST00000561952 CCDC9Q9Y3X0 531 aaKnown RBP11.92□□□□□ -0.5
GINS3-204ENST00000561952 GLI3P10071 1580 aa11.92□□□□□ -0.5
GINS3-204ENST00000561952 SLIT2O94813 1529 aa11.91□□□□□ -0.5
GINS3-204ENST00000561952 TOPAZ1Q8N9V7 1692 aa11.91□□□□□ -0.5
GINS3-204ENST00000561952 BRWD3Q6RI45 1802 aa11.9□□□□□ -0.5
GINS3-204ENST00000561952 RALGAPBQ86X10 1494 aa11.9□□□□□ -0.5
GINS3-204ENST00000561952 UNC5CLQ8IV45 518 aa11.9□□□□□ -0.5
GINS3-204ENST00000561952 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
GINS3-204ENST00000561952 CDK19Q9BWU1 502 aa11.9□□□□□ -0.5
GINS3-204ENST00000561952 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
GINS3-204ENST00000561952 CRYBG1Q9Y4K1 1723 aa11.9□□□□□ -0.5
GINS3-204ENST00000561952 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
GINS3-204ENST00000561952 TRPM1Q7Z4N2 1603 aa11.89□□□□□ -0.51
GINS3-204ENST00000561952 NRAPQ86VF7 1730 aa11.89□□□□□ -0.51
GINS3-204ENST00000561952 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
GINS3-204ENST00000561952 L3MBTL2Q969R5 705 aa11.89□□□□□ -0.51
GINS3-204ENST00000561952 GJD4Q96KN9 370 aaPredicted RBP11.89□□□□□ -0.51
GINS3-204ENST00000561952 MYCNP04198 464 aaPredicted RBP11.88□□□□□ -0.51
GINS3-204ENST00000561952 PHRF1Q9P1Y6 1649 aaKnown RBP11.88□□□□□ -0.51
GINS3-204ENST00000561952 CENPJQ9HC77 1338 aaPredicted RBP11.87□□□□□ -0.51
GINS3-204ENST00000561952 A0A0G2JS52 829 aa11.87□□□□□ -0.51
GINS3-204ENST00000561952 SRPK2P78362 688 aaKnown RBP11.87□□□□□ -0.51
GINS3-204ENST00000561952 MYT1Q01538 1121 aa11.87□□□□□ -0.51
GINS3-204ENST00000561952 COL14A1Q05707 1796 aaKnown RBP11.87□□□□□ -0.51
GINS3-204ENST00000561952 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
GINS3-204ENST00000561952 CABP2Q9NPB3 220 aa11.86□□□□□ -0.51
GINS3-204ENST00000561952 ACEP12821 1306 aa11.86□□□□□ -0.51
GINS3-204ENST00000561952 ROCK2O75116 1388 aaKnown RBP11.85□□□□□ -0.51
GINS3-204ENST00000561952 BTG4Q9NY30 223 aa11.85□□□□□ -0.51
GINS3-204ENST00000561952 PPIP5K1Q6PFW1 1433 aa11.85□□□□□ -0.51
GINS3-204ENST00000561952 VPS72Q15906 364 aa11.84□□□□□ -0.51
GINS3-204ENST00000561952 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
GINS3-204ENST00000561952 SEPT12Q8IYM1 358 aa11.83□□□□□ -0.52
GINS3-204ENST00000561952 PRDM11Q9NQV5 511 aa11.83□□□□□ -0.52
GINS3-204ENST00000561952 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
GINS3-204ENST00000561952 KIAA0232Q92628 1395 aa11.82□□□□□ -0.52
GINS3-204ENST00000561952 ZC3H6P61129 1189 aaKnown RBP11.82□□□□□ -0.52
GINS3-204ENST00000561952 FAM98CQ17RN3 349 aaKnown RBP11.82□□□□□ -0.52
GINS3-204ENST00000561952 NBPF8Q3BBV2 869 aa11.82□□□□□ -0.52
GINS3-204ENST00000561952 NRKQ7Z2Y5 1582 aa11.82□□□□□ -0.52
GINS3-204ENST00000561952 POLR3AO14802 1390 aaPredicted RBP11.81□□□□□ -0.52
GINS3-204ENST00000561952 ZBTB7CA1YPR0 619 aa11.81□□□□□ -0.52
GINS3-204ENST00000561952 ABTB2Q8N961 1025 aa11.81□□□□□ -0.52
GINS3-204ENST00000561952 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
GINS3-204ENST00000561952 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
GINS3-204ENST00000561952 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
GINS3-204ENST00000561952 AKT1S1Q96B36 256 aa11.79□□□□□ -0.52
GINS3-204ENST00000561952 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
GINS3-204ENST00000561952 TONSLQ96HA7 1378 aa11.79□□□□□ -0.52
GINS3-204ENST00000561952 KRT27Q7Z3Y8 459 aa11.78□□□□□ -0.52
GINS3-204ENST00000561952 USP35Q9P2H5 1018 aa11.78□□□□□ -0.52
GINS3-204ENST00000561952 EVC2Q86UK5 1308 aa11.78□□□□□ -0.52
GINS3-204ENST00000561952 AKAP12Q02952 1782 aa11.77□□□□□ -0.52
GINS3-204ENST00000561952 FAM182BQ5T319 152 aa11.77□□□□□ -0.53
GINS3-204ENST00000561952 PIK3C2AO00443 1686 aa11.77□□□□□ -0.53
GINS3-204ENST00000561952 USP6P35125 1406 aa11.77□□□□□ -0.53
GINS3-204ENST00000561952 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.53
GINS3-204ENST00000561952 SRCAPQ6ZRS2 3230 aa11.77□□□□□ -0.53
GINS3-204ENST00000561952 THSD7AQ9UPZ6 1657 aa11.76□□□□□ -0.53
GINS3-204ENST00000561952 SF3B2Q13435 895 aaKnown RBP11.76□□□□□ -0.53
GINS3-204ENST00000561952 DEFB132Q7Z7B7 95 aa11.76□□□□□ -0.53
GINS3-204ENST00000561952 SPATA31A5Q5VU36 1347 aa11.76□□□□□ -0.53
GINS3-204ENST00000561952 SPATA31A7Q8IWB4 1347 aa11.76□□□□□ -0.53
GINS3-204ENST00000561952 SOX12O15370 315 aa11.75□□□□□ -0.53
GINS3-204ENST00000561952 EVA1CP58658 441 aa11.75□□□□□ -0.53
GINS3-204ENST00000561952 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
GINS3-204ENST00000561952 CARD11Q9BXL7 1154 aa11.75□□□□□ -0.53
GINS3-204ENST00000561952 LMO7Q8WWI1 1683 aa11.75□□□□□ -0.53
GINS3-204ENST00000561952 NLRP6P59044 892 aa11.74□□□□□ -0.53
GINS3-204ENST00000561952 NLRP13Q86W25 1043 aa11.74□□□□□ -0.53
GINS3-204ENST00000561952 USP19O94966 1318 aa11.74□□□□□ -0.53
GINS3-204ENST00000561952 SSH2Q76I76 1423 aa11.74□□□□□ -0.53
GINS3-204ENST00000561952 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
GINS3-204ENST00000561952 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
GINS3-204ENST00000561952 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
GINS3-204ENST00000561952 SPATA31A1Q5TZJ5 1347 aa11.73□□□□□ -0.53
GINS3-204ENST00000561952 LARP1Q6PKG0 1096 aaKnown RBP11.73□□□□□ -0.53
GINS3-204ENST00000561952 CCDC125Q86Z20 511 aa11.73□□□□□ -0.53
GINS3-204ENST00000561952 ZRANB1Q9UGI0 708 aa11.73□□□□□ -0.53
GINS3-204ENST00000561952 ZBTB12Q9Y330 459 aaPredicted RBP11.73□□□□□ -0.53
GINS3-204ENST00000561952 RGPD5Q99666 1765 aa11.72□□□□□ -0.53
GINS3-204ENST00000561952 MON2Q7Z3U7 1717 aa11.72□□□□□ -0.53
GINS3-204ENST00000561952 GCP02774 474 aa11.72□□□□□ -0.53
GINS3-204ENST00000561952 SLIT3O75094 1523 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms