RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 PNPLA6Q8IY17 1366 aa13.54□□□□□ -0.24
TUBGCP4-202ENST00000561691 AKAP12Q02952 1782 aa13.54□□□□□ -0.24
TUBGCP4-202ENST00000561691 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
TUBGCP4-202ENST00000561691 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
TUBGCP4-202ENST00000561691 NKTRP30414 1462 aaKnown RBP13.53□□□□□ -0.24
TUBGCP4-202ENST00000561691 APAF1O14727 1248 aa13.52□□□□□ -0.24
TUBGCP4-202ENST00000561691 CCDC61Q9Y6R9 512 aa13.52□□□□□ -0.24
TUBGCP4-202ENST00000561691 NRKQ7Z2Y5 1582 aa13.52□□□□□ -0.24
TUBGCP4-202ENST00000561691 KCNA4P22459 653 aa13.51□□□□□ -0.25
TUBGCP4-202ENST00000561691 DUSP27Q5VZP5 1158 aa13.51□□□□□ -0.25
TUBGCP4-202ENST00000561691 PIK3R4Q99570 1358 aa13.51□□□□□ -0.25
TUBGCP4-202ENST00000561691 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
TUBGCP4-202ENST00000561691 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
TUBGCP4-202ENST00000561691 SSH2Q76I76 1423 aa13.5□□□□□ -0.25
TUBGCP4-202ENST00000561691 PLEKHG3A1L390 1219 aa13.5□□□□□ -0.25
TUBGCP4-202ENST00000561691 SLFN5Q08AF3 891 aa13.49□□□□□ -0.25
TUBGCP4-202ENST00000561691 ZRANB1Q9UGI0 708 aa13.49□□□□□ -0.25
TUBGCP4-202ENST00000561691 RCAN3Q9UKA8 241 aa13.49□□□□□ -0.25
TUBGCP4-202ENST00000561691 NME9Q86XW9 330 aa13.48□□□□□ -0.25
TUBGCP4-202ENST00000561691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.48□□□□□ -0.25
TUBGCP4-202ENST00000561691 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 KCNA6P17658 529 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 FBLN1P23142 703 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 RRP1P56182 461 aaKnown RBP13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 PPP4R2Q9NY27 417 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 POLKQ9UBT6 870 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 NGEFQ8N5V2 710 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 RUNDC1Q96C34 613 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 CFAP53Q96M91 514 aa13.47□□□□□ -0.25
TUBGCP4-202ENST00000561691 SETD1BQ9UPS6 1966 aaKnown RBP13.46□□□□□ -0.25
TUBGCP4-202ENST00000561691 AATKQ6ZMQ8 1374 aa13.46□□□□□ -0.25
TUBGCP4-202ENST00000561691 PLEKHF1Q96S99 279 aa13.46□□□□□ -0.25
TUBGCP4-202ENST00000561691 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.26
TUBGCP4-202ENST00000561691 USP6P35125 1406 aa13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 ACEP12821 1306 aa13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 ANKLE2Q86XL3 938 aa13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 WWC1Q8IX03 1113 aa13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
TUBGCP4-202ENST00000561691 TTC21BQ7Z4L5 1316 aa13.44□□□□□ -0.26
TUBGCP4-202ENST00000561691 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
TUBGCP4-202ENST00000561691 FMN2Q9NZ56 1722 aa13.43□□□□□ -0.26
TUBGCP4-202ENST00000561691 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
TUBGCP4-202ENST00000561691 ANKARQ7Z5J8 1434 aa13.42□□□□□ -0.26
TUBGCP4-202ENST00000561691 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
TUBGCP4-202ENST00000561691 EMILIN1Q9Y6C2 1016 aa13.42□□□□□ -0.26
TUBGCP4-202ENST00000561691 NALCNQ8IZF0 1738 aa13.42□□□□□ -0.26
TUBGCP4-202ENST00000561691 NUTM2FA1L443 756 aa13.41□□□□□ -0.26
TUBGCP4-202ENST00000561691 U2AF1L5P0DN76 240 aaPredicted RBP13.41□□□□□ -0.26
TUBGCP4-202ENST00000561691 U2AF1Q01081 240 aaKnown RBP eCLIP13.41□□□□□ -0.26
TUBGCP4-202ENST00000561691 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
TUBGCP4-202ENST00000561691 RGPD8O14715 1765 aaPredicted RBP13.41□□□□□ -0.26
TUBGCP4-202ENST00000561691 RRP7AQ9Y3A4 280 aaKnown RBP13.41□□□□□ -0.26
TUBGCP4-202ENST00000561691 MAP2P11137 1827 aaKnown RBP13.41□□□□□ -0.26
TUBGCP4-202ENST00000561691 USP31Q70CQ4 1352 aa13.4□□□□□ -0.26
TUBGCP4-202ENST00000561691 E9PSI1 815 aa13.4□□□□□ -0.26
TUBGCP4-202ENST00000561691 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
TUBGCP4-202ENST00000561691 B4GALNT3Q6L9W6 998 aa13.39□□□□□ -0.27
TUBGCP4-202ENST00000561691 NOP58Q9Y2X3 529 aaKnown RBP13.39□□□□□ -0.27
TUBGCP4-202ENST00000561691 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
TUBGCP4-202ENST00000561691 NWD1Q149M9 1564 aa13.39□□□□□ -0.27
TUBGCP4-202ENST00000561691 IL13P35225 146 aa13.39□□□□□ -0.27
TUBGCP4-202ENST00000561691 PLIN1O60240 522 aa13.38□□□□□ -0.27
TUBGCP4-202ENST00000561691 WDR63Q8IWG1 891 aa13.38□□□□□ -0.27
TUBGCP4-202ENST00000561691 EXOC6Q8TAG9 804 aa13.38□□□□□ -0.27
TUBGCP4-202ENST00000561691 COG3Q96JB2 828 aa13.38□□□□□ -0.27
TUBGCP4-202ENST00000561691 PEAK1Q9H792 1746 aa13.37□□□□□ -0.27
TUBGCP4-202ENST00000561691 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
TUBGCP4-202ENST00000561691 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
TUBGCP4-202ENST00000561691 U2SURPO15042 1029 aaKnown RBP13.37□□□□□ -0.27
TUBGCP4-202ENST00000561691 RRS1Q15050 365 aaKnown RBP13.37□□□□□ -0.27
TUBGCP4-202ENST00000561691 PMFBP1Q8TBY8 1022 aa13.37□□□□□ -0.27
TUBGCP4-202ENST00000561691 PIK3C2AO00443 1686 aa13.37□□□□□ -0.27
TUBGCP4-202ENST00000561691 MARF1Q9Y4F3 1742 aaKnown RBP13.36□□□□□ -0.27
TUBGCP4-202ENST00000561691 ADGRL3Q9HAR2 1447 aa13.36□□□□□ -0.27
TUBGCP4-202ENST00000561691 TMPOP42166 694 aaKnown RBP13.36□□□□□ -0.27
TUBGCP4-202ENST00000561691 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
TUBGCP4-202ENST00000561691 IL27Q8NEV9 243 aa13.36□□□□□ -0.27
TUBGCP4-202ENST00000561691 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
TUBGCP4-202ENST00000561691 FCHSD2O94868 740 aa13.35□□□□□ -0.27
TUBGCP4-202ENST00000561691 NEUROD2Q15784 382 aa13.35□□□□□ -0.27
TUBGCP4-202ENST00000561691 TTC21AQ8NDW8 1320 aa13.35□□□□□ -0.27
TUBGCP4-202ENST00000561691 RBM33Q96EV2 1170 aaKnown RBP13.33□□□□□ -0.28
TUBGCP4-202ENST00000561691 NBR1Q14596 966 aa13.33□□□□□ -0.28
TUBGCP4-202ENST00000561691 RGPD1P0DJD0 1748 aa13.33□□□□□ -0.28
TUBGCP4-202ENST00000561691 PPM1GO15355 546 aaPredicted RBP13.32□□□□□ -0.28
TUBGCP4-202ENST00000561691 PAK3O75914 559 aaPredicted RBP13.32□□□□□ -0.28
TUBGCP4-202ENST00000561691 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
TUBGCP4-202ENST00000561691 BCAR3O75815 825 aa13.31□□□□□ -0.28
TUBGCP4-202ENST00000561691 PRKAR2BP31323 418 aa13.31□□□□□ -0.28
TUBGCP4-202ENST00000561691 CRBNQ96SW2 442 aa13.31□□□□□ -0.28
TUBGCP4-202ENST00000561691 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.31□□□□□ -0.28
TUBGCP4-202ENST00000561691 EIF4A2Q14240 407 aaKnown RBP13.3□□□□□ -0.28
TUBGCP4-202ENST00000561691 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
TUBGCP4-202ENST00000561691 IL16Q14005 1332 aa13.3□□□□□ -0.28
TUBGCP4-202ENST00000561691 MAP3K19Q56UN5 1328 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms