RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 NKTRP30414 1462 aaKnown RBP20.52■□□□□ 0.88
AP4E1-205ENST00000561393 ACEP12821 1306 aa20.52■□□□□ 0.88
AP4E1-205ENST00000561393 PUS7Q96PZ0 661 aaKnown RBP20.52■□□□□ 0.88
AP4E1-205ENST00000561393 BCORL1Q5H9F3 1711 aa20.51■□□□□ 0.87
AP4E1-205ENST00000561393 C1orf141Q5JVX7 400 aa20.51■□□□□ 0.87
AP4E1-205ENST00000561393 POLR3AO14802 1390 aaPredicted RBP20.51■□□□□ 0.87
AP4E1-205ENST00000561393 LNPKQ9C0E8 428 aa20.51■□□□□ 0.87
AP4E1-205ENST00000561393 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
AP4E1-205ENST00000561393 ATF7IPQ6VMQ6 1270 aa20.5■□□□□ 0.87
AP4E1-205ENST00000561393 HMMRO75330 724 aa20.49■□□□□ 0.87
AP4E1-205ENST00000561393 CFAP74Q9C0B2 1584 aa20.49■□□□□ 0.87
AP4E1-205ENST00000561393 FKBP5Q13451 457 aaPredicted RBP20.49■□□□□ 0.87
AP4E1-205ENST00000561393 SSH1Q8WYL5 1049 aa20.49■□□□□ 0.87
AP4E1-205ENST00000561393 ZNF330Q9Y3S2 320 aaPredicted RBP20.49■□□□□ 0.87
AP4E1-205ENST00000561393 HECW2Q9P2P5 1572 aa20.49■□□□□ 0.87
AP4E1-205ENST00000561393 HSP90AB1P08238 724 aaKnown RBP20.48■□□□□ 0.87
AP4E1-205ENST00000561393 C1orf115Q9H7X2 142 aa20.48■□□□□ 0.87
AP4E1-205ENST00000561393 TSPOAP1O95153 1857 aa20.48■□□□□ 0.87
AP4E1-205ENST00000561393 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
AP4E1-205ENST00000561393 HSCBQ8IWL3 235 aa20.47■□□□□ 0.87
AP4E1-205ENST00000561393 POLKQ9UBT6 870 aa20.47■□□□□ 0.87
AP4E1-205ENST00000561393 PPIP5K1Q6PFW1 1433 aa20.47■□□□□ 0.87
AP4E1-205ENST00000561393 ABCA9Q8IUA7 1624 aa20.47■□□□□ 0.87
AP4E1-205ENST00000561393 MCM10Q7L590 875 aa20.46■□□□□ 0.87
AP4E1-205ENST00000561393 GAS2L2Q8NHY3 880 aa20.46■□□□□ 0.87
AP4E1-205ENST00000561393 MVPQ14764 893 aaKnown RBP20.46■□□□□ 0.87
AP4E1-205ENST00000561393 TET3O43151 1660 aa20.46■□□□□ 0.87
AP4E1-205ENST00000561393 NLRP2Q9NX02 1062 aa20.45■□□□□ 0.86
AP4E1-205ENST00000561393 PDZRN3Q9UPQ7 1066 aa20.45■□□□□ 0.86
AP4E1-205ENST00000561393 ERVK-7P63135 1459 aa20.45■□□□□ 0.86
AP4E1-205ENST00000561393 CLTCL1P53675 1640 aa20.45■□□□□ 0.86
AP4E1-205ENST00000561393 CT47B1P0C2W7 299 aaPredicted RBP20.45■□□□□ 0.86
AP4E1-205ENST00000561393 MIS18AQ9NYP9 233 aa20.45■□□□□ 0.86
AP4E1-205ENST00000561393 CHMP4AQ9BY43 222 aa20.44■□□□□ 0.86
AP4E1-205ENST00000561393 FOXO3O43524 673 aa20.44■□□□□ 0.86
AP4E1-205ENST00000561393 EFCAB6Q5THR3 1501 aa20.44■□□□□ 0.86
AP4E1-205ENST00000561393 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
AP4E1-205ENST00000561393 AAMPQ13685 434 aa20.43■□□□□ 0.86
AP4E1-205ENST00000561393 BACH2Q9BYV9 841 aa20.43■□□□□ 0.86
AP4E1-205ENST00000561393 SBNO2Q9Y2G9 1366 aa20.43■□□□□ 0.86
AP4E1-205ENST00000561393 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
AP4E1-205ENST00000561393 FAM83GA6ND36 823 aa20.42■□□□□ 0.86
AP4E1-205ENST00000561393 PHF8Q9UPP1 1060 aa20.42■□□□□ 0.86
AP4E1-205ENST00000561393 MYOM2P54296 1465 aa20.42■□□□□ 0.86
AP4E1-205ENST00000561393 TTC21BQ7Z4L5 1316 aa20.42■□□□□ 0.86
AP4E1-205ENST00000561393 ABCC3O15438 1527 aa20.42■□□□□ 0.86
AP4E1-205ENST00000561393 TMEM57Q8N5G2 664 aa20.41■□□□□ 0.86
AP4E1-205ENST00000561393 EIF5BO60841 1220 aaKnown RBP20.4■□□□□ 0.86
AP4E1-205ENST00000561393 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
AP4E1-205ENST00000561393 RAPGEF4Q8WZA2 1011 aa20.4■□□□□ 0.86
AP4E1-205ENST00000561393 TRPM1Q7Z4N2 1603 aa20.39■□□□□ 0.86
AP4E1-205ENST00000561393 TRIM6-TRIM34B2RNG4 842 aa20.39■□□□□ 0.85
AP4E1-205ENST00000561393 LTKP29376 864 aa20.39■□□□□ 0.85
AP4E1-205ENST00000561393 ABCC11Q96J66 1382 aa20.39■□□□□ 0.85
AP4E1-205ENST00000561393 USHBP1Q8N6Y0 703 aa20.38■□□□□ 0.85
AP4E1-205ENST00000561393 KIF1BO60333 1816 aa20.38■□□□□ 0.85
AP4E1-205ENST00000561393 E9PCH4 1651 aa20.38■□□□□ 0.85
AP4E1-205ENST00000561393 KCNA6P17658 529 aa20.37■□□□□ 0.85
AP4E1-205ENST00000561393 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
AP4E1-205ENST00000561393 AEBP1Q8IUX7 1158 aa20.37■□□□□ 0.85
AP4E1-205ENST00000561393 TRIM27P14373 513 aa20.36■□□□□ 0.85
AP4E1-205ENST00000561393 TNNQ9UQP3 1299 aa20.36■□□□□ 0.85
AP4E1-205ENST00000561393 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
AP4E1-205ENST00000561393 KCNJ4P48050 445 aa20.35■□□□□ 0.85
AP4E1-205ENST00000561393 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
AP4E1-205ENST00000561393 SPHKAPQ2M3C7 1700 aa20.34■□□□□ 0.85
AP4E1-205ENST00000561393 RNF17Q9BXT8 1623 aaKnown RBP20.34■□□□□ 0.85
AP4E1-205ENST00000561393 EVA1CP58658 441 aa20.34■□□□□ 0.85
AP4E1-205ENST00000561393 IFT57Q9NWB7 429 aa20.34■□□□□ 0.85
AP4E1-205ENST00000561393 KDM5AP29375 1690 aaKnown RBP20.33■□□□□ 0.85
AP4E1-205ENST00000561393 TMEM2Q9UHN6 1383 aa20.33■□□□□ 0.84
AP4E1-205ENST00000561393 BLMP54132 1417 aaPredicted RBP20.33■□□□□ 0.84
AP4E1-205ENST00000561393 CCDC27Q2M243 656 aa20.33■□□□□ 0.84
AP4E1-205ENST00000561393 NCLP19338 710 aaKnown RBP20.32■□□□□ 0.84
AP4E1-205ENST00000561393 TBX22Q9Y458 520 aa20.32■□□□□ 0.84
AP4E1-205ENST00000561393 GOLGA6L22H0YM25 854 aa20.32■□□□□ 0.84
AP4E1-205ENST00000561393 DEKP35659 375 aaKnown RBP20.32■□□□□ 0.84
AP4E1-205ENST00000561393 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
AP4E1-205ENST00000561393 CHMP3Q9Y3E7 222 aa20.32■□□□□ 0.84
AP4E1-205ENST00000561393 IGHDP01880 384 aa20.32■□□□□ 0.84
AP4E1-205ENST00000561393 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
AP4E1-205ENST00000561393 METP08581 1390 aa20.31■□□□□ 0.84
AP4E1-205ENST00000561393 TPRNQ4KMQ1 711 aa20.31■□□□□ 0.84
AP4E1-205ENST00000561393 CCDC30Q5VVM6 783 aa20.31■□□□□ 0.84
AP4E1-205ENST00000561393 TTC5Q8N0Z6 440 aa20.31■□□□□ 0.84
AP4E1-205ENST00000561393 ZNF428Q96B54 188 aa20.31■□□□□ 0.84
AP4E1-205ENST00000561393 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
AP4E1-205ENST00000561393 EIF4A2Q14240 407 aaKnown RBP20.31■□□□□ 0.84
AP4E1-205ENST00000561393 HDGFL1Q5TGJ6 251 aa20.31■□□□□ 0.84
AP4E1-205ENST00000561393 MBIPQ9NS73 344 aa20.31■□□□□ 0.84
AP4E1-205ENST00000561393 C9orf78Q9NZ63 289 aaPredicted RBP20.31■□□□□ 0.84
AP4E1-205ENST00000561393 RNF123Q5XPI4 1314 aa20.3■□□□□ 0.84
AP4E1-205ENST00000561393 AIMP1Q12904 312 aaKnown RBP20.3■□□□□ 0.84
AP4E1-205ENST00000561393 RILPL2Q969X0 211 aa20.3■□□□□ 0.84
AP4E1-205ENST00000561393 MAP3K4Q9Y6R4 1608 aa20.3■□□□□ 0.84
AP4E1-205ENST00000561393 CCDC9Q9Y3X0 531 aaKnown RBP20.3■□□□□ 0.84
AP4E1-205ENST00000561393 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
AP4E1-205ENST00000561393 INO80Q9ULG1 1556 aaPredicted RBP20.29■□□□□ 0.84
AP4E1-205ENST00000561393 RLBP1P12271 317 aa20.29■□□□□ 0.84
AP4E1-205ENST00000561393 MCCP23508 829 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms