RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-225ENST00000561225 FAM50AQ14320 339 aaKnown RBP12.09□□□□□ -0.47
MARK3-225ENST00000561225 GJD4Q96KN9 370 aaPredicted RBP12.09□□□□□ -0.47
MARK3-225ENST00000561225 FAM212AQ96EL1 285 aa12.08□□□□□ -0.48
MARK3-225ENST00000561225 LRP5O75197 1615 aa12.08□□□□□ -0.48
MARK3-225ENST00000561225 TTLL13PA6NNM8 815 aa12.07□□□□□ -0.48
MARK3-225ENST00000561225 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
MARK3-225ENST00000561225 DEFB132Q7Z7B7 95 aa12.07□□□□□ -0.48
MARK3-225ENST00000561225 NUP155O75694 1391 aa12.05□□□□□ -0.48
MARK3-225ENST00000561225 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
MARK3-225ENST00000561225 RALGAPBQ86X10 1494 aa12.04□□□□□ -0.48
MARK3-225ENST00000561225 RASEFQ8IZ41 740 aa12.04□□□□□ -0.48
MARK3-225ENST00000561225 NEXMIFQ5QGS0 1516 aa12.04□□□□□ -0.48
MARK3-225ENST00000561225 NPHP3Q7Z494 1330 aa12.04□□□□□ -0.48
MARK3-225ENST00000561225 GLI3P10071 1580 aa12.04□□□□□ -0.48
MARK3-225ENST00000561225 PXDNQ92626 1479 aa12.03□□□□□ -0.48
MARK3-225ENST00000561225 IER5LQ5T953 404 aa12.03□□□□□ -0.48
MARK3-225ENST00000561225 ROCK1Q13464 1354 aa12.03□□□□□ -0.48
MARK3-225ENST00000561225 PRAG1Q86YV5 1406 aa12.03□□□□□ -0.48
MARK3-225ENST00000561225 SLIT2O94813 1529 aa12.02□□□□□ -0.48
MARK3-225ENST00000561225 SF3B2Q13435 895 aaKnown RBP12.02□□□□□ -0.49
MARK3-225ENST00000561225 UNC5CLQ8IV45 518 aa12.02□□□□□ -0.49
MARK3-225ENST00000561225 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.02□□□□□ -0.49
MARK3-225ENST00000561225 MARF1Q9Y4F3 1742 aaKnown RBP12.02□□□□□ -0.49
MARK3-225ENST00000561225 ST18O60284 1047 aa12.01□□□□□ -0.49
MARK3-225ENST00000561225 XPCQ01831 940 aaPredicted RBP12.01□□□□□ -0.49
MARK3-225ENST00000561225 ESCO1Q5FWF5 840 aa12.01□□□□□ -0.49
MARK3-225ENST00000561225 DCAF8Q5TAQ9 597 aa12.01□□□□□ -0.49
MARK3-225ENST00000561225 SLAIN1Q8ND83 568 aa12.01□□□□□ -0.49
MARK3-225ENST00000561225 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
MARK3-225ENST00000561225 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
MARK3-225ENST00000561225 PSDA5PKW4 1024 aaPredicted RBP12□□□□□ -0.49
MARK3-225ENST00000561225 FOXO3O43524 673 aa12□□□□□ -0.49
MARK3-225ENST00000561225 HRCP23327 699 aa12□□□□□ -0.49
MARK3-225ENST00000561225 SEPT12Q8IYM1 358 aa12□□□□□ -0.49
MARK3-225ENST00000561225 HFM1A2PYH4 1435 aa12□□□□□ -0.49
MARK3-225ENST00000561225 BRWD3Q6RI45 1802 aa11.98□□□□□ -0.49
MARK3-225ENST00000561225 NUBP1P53384 320 aa11.98□□□□□ -0.49
MARK3-225ENST00000561225 CLTCL1P53675 1640 aa11.97□□□□□ -0.49
MARK3-225ENST00000561225 CDC42BPGQ6DT37 1551 aa11.97□□□□□ -0.49
MARK3-225ENST00000561225 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
MARK3-225ENST00000561225 LRPPRCP42704 1394 aaKnown RBP11.96□□□□□ -0.49
MARK3-225ENST00000561225 KRT27Q7Z3Y8 459 aa11.96□□□□□ -0.49
MARK3-225ENST00000561225 SGIP1Q9BQI5 828 aa11.96□□□□□ -0.49
MARK3-225ENST00000561225 SPATA31A3Q5VYP0 1347 aa11.95□□□□□ -0.5
MARK3-225ENST00000561225 VGFO15240 615 aaPredicted RBP11.95□□□□□ -0.5
MARK3-225ENST00000561225 VPS72Q15906 364 aa11.95□□□□□ -0.5
MARK3-225ENST00000561225 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
MARK3-225ENST00000561225 USP32Q8NFA0 1604 aa11.95□□□□□ -0.5
MARK3-225ENST00000561225 BAG6P46379 1132 aa11.94□□□□□ -0.5
MARK3-225ENST00000561225 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
MARK3-225ENST00000561225 GSE1Q14687 1217 aa11.93□□□□□ -0.5
MARK3-225ENST00000561225 NAIPQ13075 1403 aa11.93□□□□□ -0.5
MARK3-225ENST00000561225 SPOCK2Q92563 424 aa11.92□□□□□ -0.5
MARK3-225ENST00000561225 EN1Q05925 392 aaPredicted RBP11.91□□□□□ -0.5
MARK3-225ENST00000561225 MMRN1Q13201 1228 aa11.91□□□□□ -0.5
MARK3-225ENST00000561225 R3HDM1Q15032 1099 aaKnown RBP11.91□□□□□ -0.5
MARK3-225ENST00000561225 CCDC9Q9Y3X0 531 aaKnown RBP11.91□□□□□ -0.5
MARK3-225ENST00000561225 CCDC144AA2RUR9 1427 aa11.91□□□□□ -0.5
MARK3-225ENST00000561225 ITGAEP38570 1179 aa11.9□□□□□ -0.5
MARK3-225ENST00000561225 CABLES1Q8TDN4 633 aa11.9□□□□□ -0.5
MARK3-225ENST00000561225 KIF1BO60333 1816 aa11.9□□□□□ -0.5
MARK3-225ENST00000561225 RPGRIP1LQ68CZ1 1315 aa11.89□□□□□ -0.51
MARK3-225ENST00000561225 TNS3Q68CZ2 1445 aa11.89□□□□□ -0.51
MARK3-225ENST00000561225 HAP1P54257 671 aaPredicted RBP11.89□□□□□ -0.51
MARK3-225ENST00000561225 KRT28Q7Z3Y7 464 aa11.89□□□□□ -0.51
MARK3-225ENST00000561225 WAPLQ7Z5K2 1190 aa11.89□□□□□ -0.51
MARK3-225ENST00000561225 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
MARK3-225ENST00000561225 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
MARK3-225ENST00000561225 NWD2Q9ULI1 1742 aa11.89□□□□□ -0.51
MARK3-225ENST00000561225 TECPR2O15040 1411 aa11.88□□□□□ -0.51
MARK3-225ENST00000561225 A0A0G2JS52 829 aa11.88□□□□□ -0.51
MARK3-225ENST00000561225 PLCG2P16885 1265 aa11.88□□□□□ -0.51
MARK3-225ENST00000561225 YY1P25490 414 aa11.88□□□□□ -0.51
MARK3-225ENST00000561225 MYT1Q01538 1121 aa11.88□□□□□ -0.51
MARK3-225ENST00000561225 KIF1AQ12756 1690 aa11.87□□□□□ -0.51
MARK3-225ENST00000561225 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
MARK3-225ENST00000561225 FAM98CQ17RN3 349 aaKnown RBP11.87□□□□□ -0.51
MARK3-225ENST00000561225 PLEKHH1Q9ULM0 1364 aa11.87□□□□□ -0.51
MARK3-225ENST00000561225 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
MARK3-225ENST00000561225 FAM182BQ5T319 152 aa11.86□□□□□ -0.51
MARK3-225ENST00000561225 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
MARK3-225ENST00000561225 STK26Q9P289 416 aa11.86□□□□□ -0.51
MARK3-225ENST00000561225 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
MARK3-225ENST00000561225 PPLO60437 1756 aa11.85□□□□□ -0.51
MARK3-225ENST00000561225 TMEM106CQ9BVX2 250 aa11.85□□□□□ -0.51
MARK3-225ENST00000561225 FMN2Q9NZ56 1722 aa11.85□□□□□ -0.51
MARK3-225ENST00000561225 UTRNP46939 3433 aa11.85□□□□□ -0.51
MARK3-225ENST00000561225 SBNO1A3KN83 1393 aa11.84□□□□□ -0.51
MARK3-225ENST00000561225 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
MARK3-225ENST00000561225 RGPD1P0DJD0 1748 aa11.84□□□□□ -0.51
MARK3-225ENST00000561225 PSME1Q06323 249 aa11.84□□□□□ -0.51
MARK3-225ENST00000561225 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
MARK3-225ENST00000561225 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
MARK3-225ENST00000561225 TMEM121BQ9BXQ6 578 aaPredicted RBP11.84□□□□□ -0.51
MARK3-225ENST00000561225 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
MARK3-225ENST00000561225 ADGRF5Q8IZF2 1346 aa11.84□□□□□ -0.51
MARK3-225ENST00000561225 ABCA3Q99758 1704 aa11.83□□□□□ -0.52
MARK3-225ENST00000561225 ARHGEF10O15013 1369 aa11.83□□□□□ -0.52
MARK3-225ENST00000561225 BTG4Q9NY30 223 aa11.83□□□□□ -0.52
MARK3-225ENST00000561225 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms