RNA–Protein interactions for RNA: ENST00000560997.1

SNX22-206, Transcript of sorting nexin 22, humanhuman

TSL 1 (best)

Gene SNX22, Length 3,367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-206ENST00000560997 POGKQ9P215 609 aa12.55□□□□□ -0.4
SNX22-206ENST00000560997 NLRP1Q9C000 1473 aa12.54□□□□□ -0.4
SNX22-206ENST00000560997 TRIM35Q9UPQ4 493 aa12.54□□□□□ -0.4
SNX22-206ENST00000560997 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
SNX22-206ENST00000560997 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
SNX22-206ENST00000560997 EXOSC9Q06265 439 aaKnown RBP12.53□□□□□ -0.4
SNX22-206ENST00000560997 PDZRN3Q9UPQ7 1066 aa12.53□□□□□ -0.4
SNX22-206ENST00000560997 TERF2IPQ9NYB0 399 aa12.53□□□□□ -0.4
SNX22-206ENST00000560997 ANKRD26Q9UPS8 1709 aa12.53□□□□□ -0.4
SNX22-206ENST00000560997 MVPQ14764 893 aaKnown RBP12.53□□□□□ -0.4
SNX22-206ENST00000560997 CLTCQ00610 1675 aaKnown RBP12.53□□□□□ -0.4
SNX22-206ENST00000560997 ZKSCAN2Q63HK3 967 aa12.52□□□□□ -0.41
SNX22-206ENST00000560997 ALKQ9UM73 1620 aa12.52□□□□□ -0.41
SNX22-206ENST00000560997 CDK19Q9BWU1 502 aa12.52□□□□□ -0.41
SNX22-206ENST00000560997 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
SNX22-206ENST00000560997 AAMPQ13685 434 aa12.51□□□□□ -0.41
SNX22-206ENST00000560997 FTSJ3Q8IY81 847 aaKnown RBP12.51□□□□□ -0.41
SNX22-206ENST00000560997 DZIP1LQ8IYY4 767 aaKnown RBP12.51□□□□□ -0.41
SNX22-206ENST00000560997 CABP1Q9NZU7 370 aa12.51□□□□□ -0.41
SNX22-206ENST00000560997 FBLN1P23142 703 aa12.51□□□□□ -0.41
SNX22-206ENST00000560997 SSH1Q8WYL5 1049 aa12.5□□□□□ -0.41
SNX22-206ENST00000560997 ARHGEF40Q8TER5 1519 aa12.5□□□□□ -0.41
SNX22-206ENST00000560997 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
SNX22-206ENST00000560997 RIMBP3CA6NJZ7 1639 aa12.5□□□□□ -0.41
SNX22-206ENST00000560997 RIMBP3BA6NNM3 1639 aa12.5□□□□□ -0.41
SNX22-206ENST00000560997 RIMBP3Q9UFD9 1639 aa12.5□□□□□ -0.41
SNX22-206ENST00000560997 MED14O60244 1454 aa12.5□□□□□ -0.41
SNX22-206ENST00000560997 TRIM27P14373 513 aa12.5□□□□□ -0.41
SNX22-206ENST00000560997 RIPK4P57078 832 aa12.5□□□□□ -0.41
SNX22-206ENST00000560997 HDGFL2Q7Z4V5 671 aaPredicted RBP12.49□□□□□ -0.41
SNX22-206ENST00000560997 STAG3Q9UJ98 1225 aa12.49□□□□□ -0.41
SNX22-206ENST00000560997 DIAPH1O60610 1272 aaKnown RBP12.49□□□□□ -0.41
SNX22-206ENST00000560997 FRAT2O75474 233 aaPredicted RBP12.49□□□□□ -0.41
SNX22-206ENST00000560997 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
SNX22-206ENST00000560997 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNX22-206ENST00000560997 KIF20BQ96Q89 1820 aa12.48□□□□□ -0.41
SNX22-206ENST00000560997 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
SNX22-206ENST00000560997 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
SNX22-206ENST00000560997 PNPLA6Q8IY17 1366 aa12.47□□□□□ -0.41
SNX22-206ENST00000560997 ITPRIPQ8IWB1 547 aa12.47□□□□□ -0.41
SNX22-206ENST00000560997 NOB1Q9ULX3 412 aaKnown RBP12.47□□□□□ -0.41
SNX22-206ENST00000560997 LRRC7Q96NW7 1537 aa12.46□□□□□ -0.41
SNX22-206ENST00000560997 ZBTB22O15209 634 aa12.46□□□□□ -0.41
SNX22-206ENST00000560997 GSE1Q14687 1217 aa12.46□□□□□ -0.41
SNX22-206ENST00000560997 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.41
SNX22-206ENST00000560997 IL27Q8NEV9 243 aa12.46□□□□□ -0.41
SNX22-206ENST00000560997 IL16Q14005 1332 aa12.46□□□□□ -0.42
SNX22-206ENST00000560997 FAM69CQ0P6D2 419 aa12.45□□□□□ -0.42
SNX22-206ENST00000560997 TMEM57Q8N5G2 664 aa12.45□□□□□ -0.42
SNX22-206ENST00000560997 POLKQ9UBT6 870 aa12.45□□□□□ -0.42
SNX22-206ENST00000560997 TSPOAP1O95153 1857 aa12.45□□□□□ -0.42
SNX22-206ENST00000560997 ZMYM3Q14202 1370 aa12.45□□□□□ -0.42
SNX22-206ENST00000560997 PRKAR2BP31323 418 aa12.44□□□□□ -0.42
SNX22-206ENST00000560997 TBC1D32Q96NH3 1257 aa12.44□□□□□ -0.42
SNX22-206ENST00000560997 A2ML1A8K2U0 1454 aa12.44□□□□□ -0.42
SNX22-206ENST00000560997 RSPH6AQ9H0K4 717 aa12.44□□□□□ -0.42
SNX22-206ENST00000560997 DDX19BQ9UMR2 479 aa12.44□□□□□ -0.42
SNX22-206ENST00000560997 SLKQ9H2G2 1235 aaPredicted RBP12.43□□□□□ -0.42
SNX22-206ENST00000560997 HMOX1P09601 288 aa12.43□□□□□ -0.42
SNX22-206ENST00000560997 MLECQ14165 292 aa12.43□□□□□ -0.42
SNX22-206ENST00000560997 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
SNX22-206ENST00000560997 SETD1AO15047 1707 aaKnown RBP12.43□□□□□ -0.42
SNX22-206ENST00000560997 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
SNX22-206ENST00000560997 FAM135BQ49AJ0 1406 aa12.43□□□□□ -0.42
SNX22-206ENST00000560997 RIMS2Q9UQ26 1411 aa12.43□□□□□ -0.42
SNX22-206ENST00000560997 FCHSD2O94868 740 aa12.43□□□□□ -0.42
SNX22-206ENST00000560997 HDAC1Q13547 482 aaPredicted RBP12.43□□□□□ -0.42
SNX22-206ENST00000560997 PHACTR3Q96KR7 559 aa12.43□□□□□ -0.42
SNX22-206ENST00000560997 THUMPD2Q9BTF0 503 aaKnown RBP12.43□□□□□ -0.42
SNX22-206ENST00000560997 UPF2Q9HAU5 1272 aaKnown RBP12.43□□□□□ -0.42
SNX22-206ENST00000560997 BECN1Q14457 450 aa12.42□□□□□ -0.42
SNX22-206ENST00000560997 ZRANB1Q9UGI0 708 aa12.42□□□□□ -0.42
SNX22-206ENST00000560997 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
SNX22-206ENST00000560997 PNNQ9H307 717 aaKnown RBP12.41□□□□□ -0.42
SNX22-206ENST00000560997 DLC1Q96QB1 1528 aa12.41□□□□□ -0.42
SNX22-206ENST00000560997 ATP7BP35670 1465 aa12.41□□□□□ -0.42
SNX22-206ENST00000560997 ZBTB40Q9NUA8 1239 aa12.41□□□□□ -0.42
SNX22-206ENST00000560997 KIF16BQ96L93 1317 aa12.41□□□□□ -0.42
SNX22-206ENST00000560997 DIP2BQ9P265 1576 aa12.4□□□□□ -0.42
SNX22-206ENST00000560997 NME9Q86XW9 330 aa12.4□□□□□ -0.42
SNX22-206ENST00000560997 NCKAP5LQ9HCH0 1330 aa12.4□□□□□ -0.42
SNX22-206ENST00000560997 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
SNX22-206ENST00000560997 SPATA31D1Q6ZQQ2 1576 aa12.39□□□□□ -0.43
SNX22-206ENST00000560997 SMC5Q8IY18 1101 aa12.39□□□□□ -0.43
SNX22-206ENST00000560997 RTN4Q9NQC3 1192 aaKnown RBP12.39□□□□□ -0.43
SNX22-206ENST00000560997 MFAP1P55081 439 aaKnown RBP12.39□□□□□ -0.43
SNX22-206ENST00000560997 BRPF3Q9ULD4 1205 aa12.39□□□□□ -0.43
SNX22-206ENST00000560997 PPIP5K1Q6PFW1 1433 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 NRXN3Q9Y4C0 1643 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 IPO8O15397 1037 aaKnown RBP12.38□□□□□ -0.43
SNX22-206ENST00000560997 NFE2L2Q16236 605 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 ANTXR1Q9H6X2 564 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 METP08581 1390 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 AGLP35573 1532 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 TXNDC2Q86VQ3 553 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
SNX22-206ENST00000560997 CPSF1Q10570 1443 aaKnown RBP12.38□□□□□ -0.43
SNX22-206ENST00000560997 WASLO00401 505 aaPredicted RBP12.38□□□□□ -0.43
SNX22-206ENST00000560997 REREQ9P2R6 1566 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms