RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	RARS	P54136	660 aa	Known RBP	7.5	□□□□□ -1.21
LRRC49-223	ENST00000560369	ADGRB2	O60241	1585 aa		7.5	□□□□□ -1.21
LRRC49-223	ENST00000560369	AGL	P35573	1532 aa		7.49	□□□□□ -1.21
LRRC49-223	ENST00000560369	CEBPA	P49715	358 aa	Predicted RBP	7.49	□□□□□ -1.21
LRRC49-223	ENST00000560369	RTL5	Q5HYW3	569 aa	Predicted RBP	7.49	□□□□□ -1.21
LRRC49-223	ENST00000560369	TRIM35	Q9UPQ4	493 aa		7.49	□□□□□ -1.21
LRRC49-223	ENST00000560369	RERE	Q9P2R6	1566 aa		7.49	□□□□□ -1.21
LRRC49-223	ENST00000560369	NUTM2F	A1L443	756 aa		7.49	□□□□□ -1.21
LRRC49-223	ENST00000560369	RTN4	Q9NQC3	1192 aa	Known RBP	7.49	□□□□□ -1.21
LRRC49-223	ENST00000560369	ZMYM3	Q14202	1370 aa		7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	SLC4A3	P48751	1232 aa		7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	NME9	Q86XW9	330 aa		7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	CFAP53	Q96M91	514 aa		7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	PUS7	Q96PZ0	661 aa	Known RBP	7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	ANO8	Q9HCE9	1232 aa	Predicted RBP	7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	LAS1L	Q9Y4W2	734 aa	Known RBP	7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	DLG5	Q8TDM6	1919 aa		7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	IL27	Q8NEV9	243 aa		7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	PCDHB15	Q9Y5E8	787 aa		7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	EMILIN1	Q9Y6C2	1016 aa		7.48	□□□□□ -1.21
LRRC49-223	ENST00000560369	CPS1	P31327	1500 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	HMOX1	P09601	288 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	TMPO	P42166	694 aa	Known RBP	7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	EXOSC9	Q06265	439 aa	Known RBP	7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	C8orf34	Q49A92	452 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	CENPQ	Q7L2Z9	268 aa	Predicted RBP	7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	THUMPD2	Q9BTF0	503 aa	Known RBP	7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	TERF2IP	Q9NYB0	399 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	ATAD2	Q6PL18	1390 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	DCAF8L1	A6NGE4	600 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	CANX	P27824	592 aa	Known RBP	7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	PHACTR3	Q96KR7	559 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	POLK	Q9UBT6	870 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	UBR1	Q8IWV7	1749 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	NSD2	O96028	1365 aa		7.47	□□□□□ -1.21
LRRC49-223	ENST00000560369	RGPD8	O14715	1765 aa	Predicted RBP	7.46	□□□□□ -1.21
LRRC49-223	ENST00000560369	MS4A1	P11836	297 aa		7.46	□□□□□ -1.21
LRRC49-223	ENST00000560369	WDR63	Q8IWG1	891 aa		7.46	□□□□□ -1.21
LRRC49-223	ENST00000560369	PRR36	Q9H6K5	1346 aa		7.46	□□□□□ -1.21
LRRC49-223	ENST00000560369	LRRC7	Q96NW7	1537 aa		7.46	□□□□□ -1.22
LRRC49-223	ENST00000560369	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	7.46	□□□□□ -1.22
LRRC49-223	ENST00000560369	RRS1	Q15050	365 aa	Known RBP	7.46	□□□□□ -1.22
LRRC49-223	ENST00000560369	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.46	□□□□□ -1.22
LRRC49-223	ENST00000560369	SEC24B	O95487	1268 aa		7.45	□□□□□ -1.22
LRRC49-223	ENST00000560369	LTK	P29376	864 aa		7.45	□□□□□ -1.22
LRRC49-223	ENST00000560369	RIPK4	P57078	832 aa		7.45	□□□□□ -1.22
LRRC49-223	ENST00000560369	PPIP5K1	Q6PFW1	1433 aa		7.45	□□□□□ -1.22
LRRC49-223	ENST00000560369	VIRMA	Q69YN4	1812 aa	Known RBP	7.45	□□□□□ -1.22
LRRC49-223	ENST00000560369	WASL	O00401	505 aa	Predicted RBP	7.45	□□□□□ -1.22
LRRC49-223	ENST00000560369	DIAPH1	O60610	1272 aa	Known RBP	7.45	□□□□□ -1.22
LRRC49-223	ENST00000560369	PRKCSH	P14314	528 aa	Predicted RBP	7.45	□□□□□ -1.22
LRRC49-223	ENST00000560369	MED14	O60244	1454 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	ROBO2	Q9HCK4	1378 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	PRKAR2B	P31323	418 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	PDE3A	Q14432	1141 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	CCDC27	Q2M243	656 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	NUDT16	Q96DE0	195 aa	Known RBP	7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	SLC26A8	Q96RN1	970 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	AKAP12	Q02952	1782 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	DLC1	Q96QB1	1528 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	PNPLA6	Q8IY17	1366 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	SSH1	Q8WYL5	1049 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	MON2	Q7Z3U7	1717 aa		7.44	□□□□□ -1.22
LRRC49-223	ENST00000560369	NINL	Q9Y2I6	1382 aa		7.43	□□□□□ -1.22
LRRC49-223	ENST00000560369	ITSN1	Q15811	1721 aa		7.43	□□□□□ -1.22
LRRC49-223	ENST00000560369	NEFM	P07197	916 aa		7.43	□□□□□ -1.22
LRRC49-223	ENST00000560369	RSPH6A	Q9H0K4	717 aa		7.43	□□□□□ -1.22
LRRC49-223	ENST00000560369	CPSF1	Q10570	1443 aa	Known RBP	7.43	□□□□□ -1.22
LRRC49-223	ENST00000560369	TNR	Q92752	1358 aa		7.43	□□□□□ -1.22
LRRC49-223	ENST00000560369	FAM83G	A6ND36	823 aa		7.43	□□□□□ -1.22
LRRC49-223	ENST00000560369	ESF1	Q9H501	851 aa	Known RBP	7.43	□□□□□ -1.22
LRRC49-223	ENST00000560369	MAPK8IP3	Q9UPT6	1336 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	ELL2	O00472	640 aa	Predicted RBP	7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	SOX12	O15370	315 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	DCTN1	Q14203	1278 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	NGEF	Q8N5V2	710 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	KNDC1	Q76NI1	1749 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	C3	P01024	1663 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	ADAMTS13	Q76LX8	1427 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	ATP7B	P35670	1465 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	TRIM27	P14373	513 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	TSPYL6	Q8N831	410 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	SMC4	Q9NTJ3	1288 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	NOB1	Q9ULX3	412 aa	Known RBP	7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	PTPRU	Q92729	1446 aa		7.42	□□□□□ -1.22
LRRC49-223	ENST00000560369	RIMS1	Q86UR5	1692 aa	Known RBP	7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	SETD1B	Q9UPS6	1966 aa	Known RBP	7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	IL13	P35225	146 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	FAM161A	Q3B820	660 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	AEBP1	Q8IUX7	1158 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	MYH16	Q9H6N6	1097 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	FAM135B	Q49AJ0	1406 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	TMEM2	Q9UHN6	1383 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	USP19	O94966	1318 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	CDC42BPG	Q6DT37	1551 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	PDZRN3	Q9UPQ7	1066 aa		7.41	□□□□□ -1.22
LRRC49-223	ENST00000560369	PEAK1	Q9H792	1746 aa		7.4	□□□□□ -1.22
LRRC49-223	ENST00000560369	MVP	Q14764	893 aa	Known RBP	7.4	□□□□□ -1.23
LRRC49-223	ENST00000560369	TMEM57	Q8N5G2	664 aa		7.4	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms