RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 HDAC1Q13547 482 aaPredicted RBP6.47□□□□□ -1.37
LRRC49-221ENST00000560107 TMEM132EQ6IEE7 984 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 ITPRIPQ8IWB1 547 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 HSCBQ8IWL3 235 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 VWDEQ8N2E2 1590 aa6.47□□□□□ -1.37
LRRC49-221ENST00000560107 NEURL4Q96JN8 1562 aa6.46□□□□□ -1.38
LRRC49-221ENST00000560107 SSH1Q8WYL5 1049 aa6.46□□□□□ -1.38
LRRC49-221ENST00000560107 GRPEL1Q9HAV7 217 aa6.46□□□□□ -1.38
LRRC49-221ENST00000560107 NOS1P29475 1434 aa6.46□□□□□ -1.38
LRRC49-221ENST00000560107 QRICH2Q9H0J4 1663 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 DDX11L8A8MPP1 907 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 IGSF3O75054 1194 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 DDIT3P35638 169 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 ATF7IPQ6VMQ6 1270 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 SMC5Q8IY18 1101 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 VSIG10Q8N0Z9 540 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 NOB1Q9ULX3 412 aaKnown RBP6.45□□□□□ -1.38
LRRC49-221ENST00000560107 DDX19BQ9UMR2 479 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 NRXN1Q9ULB1 1477 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 ZC3H13Q5T200 1668 aaKnown RBP6.45□□□□□ -1.38
LRRC49-221ENST00000560107 TMEM57Q8N5G2 664 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 TNPO1Q92973 898 aaKnown RBP6.45□□□□□ -1.38
LRRC49-221ENST00000560107 ATP7AQ04656 1500 aa6.45□□□□□ -1.38
LRRC49-221ENST00000560107 ADGRB2O60241 1585 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 PLCB2Q00722 1185 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 ERBB4Q15303 1308 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 MROH1Q8NDA8 1641 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 BCCIPQ9P287 314 aaKnown RBP eCLIP6.44□□□□□ -1.38
LRRC49-221ENST00000560107 TRIM35Q9UPQ4 493 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 NCOA3Q9Y6Q9 1424 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 CD109Q6YHK3 1445 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 U2SURPO15042 1029 aaKnown RBP6.44□□□□□ -1.38
LRRC49-221ENST00000560107 CT47B1P0C2W7 299 aaPredicted RBP6.44□□□□□ -1.38
LRRC49-221ENST00000560107 RBM25P49756 843 aaKnown RBP6.44□□□□□ -1.38
LRRC49-221ENST00000560107 MAPK8IP2Q13387 824 aaPredicted RBP6.44□□□□□ -1.38
LRRC49-221ENST00000560107 GAS2L3Q86XJ1 694 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 LNPKQ9C0E8 428 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 C14orf93Q9H972 538 aaKnown RBP6.44□□□□□ -1.38
LRRC49-221ENST00000560107 ZBTB40Q9NUA8 1239 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 USP32Q8NFA0 1604 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 INO80Q9ULG1 1556 aaPredicted RBP6.44□□□□□ -1.38
LRRC49-221ENST00000560107 SETBP1Q9Y6X0 1596 aa6.44□□□□□ -1.38
LRRC49-221ENST00000560107 ESPNB1AK53 854 aa6.43□□□□□ -1.38
LRRC49-221ENST00000560107 HSP90AB1P08238 724 aaKnown RBP6.43□□□□□ -1.38
LRRC49-221ENST00000560107 TMPOP42166 694 aaKnown RBP6.43□□□□□ -1.38
LRRC49-221ENST00000560107 PLEKHF1Q96S99 279 aa6.43□□□□□ -1.38
LRRC49-221ENST00000560107 FOXD4L1Q9NU39 408 aa6.43□□□□□ -1.38
LRRC49-221ENST00000560107 EFCAB6Q5THR3 1501 aa6.43□□□□□ -1.38
LRRC49-221ENST00000560107 HSP90AA1P07900 732 aaKnown RBP6.43□□□□□ -1.38
LRRC49-221ENST00000560107 NUCB1Q02818 461 aa6.43□□□□□ -1.38
LRRC49-221ENST00000560107 SNX21Q969T3 373 aa6.43□□□□□ -1.38
LRRC49-221ENST00000560107 CFAP65Q6ZU64 1925 aaKnown RBP6.43□□□□□ -1.38
LRRC49-221ENST00000560107 PPRC1Q5VV67 1664 aaKnown RBP6.43□□□□□ -1.38
LRRC49-221ENST00000560107 CFAP44Q96MT7 982 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 CABP2Q9NPB3 220 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 ADGRL1O94910 1474 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 ADGRB1O14514 1584 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 CD2BP2O95400 341 aaKnown RBP6.42□□□□□ -1.38
LRRC49-221ENST00000560107 RAB3GAP1Q15042 981 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 CHD1LQ86WJ1 897 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 KIF2CQ99661 725 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 ADGRB3O60242 1522 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 ANKRD36BQ8N2N9 1353 aa6.42□□□□□ -1.38
LRRC49-221ENST00000560107 RIPK4P57078 832 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 HSP90AA2PQ14568 343 aaPredicted RBP6.41□□□□□ -1.38
LRRC49-221ENST00000560107 NUTM2DQ5VT03 806 aaPredicted RBP6.41□□□□□ -1.38
LRRC49-221ENST00000560107 TRIM44Q96DX7 344 aaPredicted RBP6.41□□□□□ -1.38
LRRC49-221ENST00000560107 GBP4Q96PP9 640 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 RBM42Q9BTD8 480 aaKnown RBP6.41□□□□□ -1.38
LRRC49-221ENST00000560107 GGNBP2Q9H3C7 697 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 ISY1Q9ULR0 285 aaKnown RBP6.41□□□□□ -1.38
LRRC49-221ENST00000560107 FANCAO15360 1455 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 ARAP3Q8WWN8 1544 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 SAFB2Q14151 953 aaKnown RBP eCLIP6.41□□□□□ -1.38
LRRC49-221ENST00000560107 CIZ1Q9ULV3 898 aaPredicted RBP6.41□□□□□ -1.38
LRRC49-221ENST00000560107 PPLO60437 1756 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 TULP4Q9NRJ4 1543 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 EVC2Q86UK5 1308 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 ANKRD45Q5TZF3 282 aa6.41□□□□□ -1.38
LRRC49-221ENST00000560107 NAP1L2Q9ULW6 460 aaPredicted RBP6.41□□□□□ -1.38
LRRC49-221ENST00000560107 NSD2O96028 1365 aa6.4□□□□□ -1.38
LRRC49-221ENST00000560107 UHRF1BP1LA0JNW5 1464 aa6.4□□□□□ -1.38
LRRC49-221ENST00000560107 IPO8O15397 1037 aaKnown RBP6.4□□□□□ -1.38
LRRC49-221ENST00000560107 SKOR2Q2VWA4 1001 aaPredicted RBP6.4□□□□□ -1.38
LRRC49-221ENST00000560107 BMP2KLQ5H9B9 411 aa6.4□□□□□ -1.38
LRRC49-221ENST00000560107 C1orf115Q9H7X2 142 aa6.4□□□□□ -1.38
LRRC49-221ENST00000560107 ABCC11Q96J66 1382 aa6.4□□□□□ -1.38
LRRC49-221ENST00000560107 IL16Q14005 1332 aa6.4□□□□□ -1.39
LRRC49-221ENST00000560107 KIF16BQ96L93 1317 aa6.4□□□□□ -1.39
LRRC49-221ENST00000560107 RRP9O43818 475 aaKnown RBP6.4□□□□□ -1.39
LRRC49-221ENST00000560107 SSFA2P28290 1259 aa6.4□□□□□ -1.39
LRRC49-221ENST00000560107 ABCA9Q8IUA7 1624 aa6.4□□□□□ -1.39
LRRC49-221ENST00000560107 COL3A1P02461 1466 aaPredicted RBP6.39□□□□□ -1.39
LRRC49-221ENST00000560107 CFAP74Q9C0B2 1584 aa6.39□□□□□ -1.39
LRRC49-221ENST00000560107 PPIP5K1Q6PFW1 1433 aa6.39□□□□□ -1.39
LRRC49-221ENST00000560107 K7ELQ4 463 aaPredicted RBP6.39□□□□□ -1.39
LRRC49-221ENST00000560107 TBC1D9Q6ZT07 1266 aa6.39□□□□□ -1.39
LRRC49-221ENST00000560107 GAS2L2Q8NHY3 880 aa6.39□□□□□ -1.39
LRRC49-221ENST00000560107 A0A1W2PP64 1363 aa6.39□□□□□ -1.39
LRRC49-221ENST00000560107 GLI2P10070 1586 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms