RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 MTMR2Q13614 643 aa11.25□□□□□ -0.61
CRNDE-208ENST00000560029 H3BM21 787 aa11.24□□□□□ -0.61
CRNDE-208ENST00000560029 PURBQ96QR8 312 aaKnown RBP11.24□□□□□ -0.61
CRNDE-208ENST00000560029 VARSP26640 1264 aaKnown RBP11.23□□□□□ -0.61
CRNDE-208ENST00000560029 ZSCAN1Q8NBB4 408 aa11.23□□□□□ -0.61
CRNDE-208ENST00000560029 BEGAINQ9BUH8 593 aa11.23□□□□□ -0.61
CRNDE-208ENST00000560029 WDR4P57081 412 aaKnown RBP11.22□□□□□ -0.61
CRNDE-208ENST00000560029 MRPL14Q6P1L8 145 aaKnown RBP11.22□□□□□ -0.61
CRNDE-208ENST00000560029 GIGYF2Q6Y7W6 1299 aaKnown RBP11.22□□□□□ -0.61
CRNDE-208ENST00000560029 PCDHB15Q9Y5E8 787 aa11.22□□□□□ -0.61
CRNDE-208ENST00000560029 PLEKHG3A1L390 1219 aa11.21□□□□□ -0.61
CRNDE-208ENST00000560029 TIMP2P16035 220 aa11.21□□□□□ -0.61
CRNDE-208ENST00000560029 ARID5BQ14865 1188 aa11.21□□□□□ -0.61
CRNDE-208ENST00000560029 FOXJ1Q92949 421 aa11.21□□□□□ -0.61
CRNDE-208ENST00000560029 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
CRNDE-208ENST00000560029 CFAP99D6REC4 459 aa11.19□□□□□ -0.62
CRNDE-208ENST00000560029 TBC1D2Q9BYX2 928 aa11.19□□□□□ -0.62
CRNDE-208ENST00000560029 MAP10Q9P2G4 905 aa11.19□□□□□ -0.62
CRNDE-208ENST00000560029 FAM181BA6NEQ2 426 aa11.18□□□□□ -0.62
CRNDE-208ENST00000560029 SCARF1Q14162 830 aa11.18□□□□□ -0.62
CRNDE-208ENST00000560029 DESI1Q6ICB0 168 aa11.18□□□□□ -0.62
CRNDE-208ENST00000560029 BARGINQ6ZT62 677 aa11.18□□□□□ -0.62
CRNDE-208ENST00000560029 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
CRNDE-208ENST00000560029 ADH1CP00326 375 aa11.17□□□□□ -0.62
CRNDE-208ENST00000560029 LYPD8Q6UX82 237 aa11.17□□□□□ -0.62
CRNDE-208ENST00000560029 KLF16Q9BXK1 252 aaPredicted RBP11.17□□□□□ -0.62
CRNDE-208ENST00000560029 ZMYND10O75800 440 aa11.16□□□□□ -0.62
CRNDE-208ENST00000560029 AMHR2Q16671 573 aa11.16□□□□□ -0.62
CRNDE-208ENST00000560029 RSBN1LQ6PCB5 846 aaPredicted RBP11.16□□□□□ -0.62
CRNDE-208ENST00000560029 FAM174AQ8TBP5 190 aa11.16□□□□□ -0.62
CRNDE-208ENST00000560029 ZFAND3Q9H8U3 227 aa11.16□□□□□ -0.62
CRNDE-208ENST00000560029 CSPP1Q1MSJ5 1256 aa11.15□□□□□ -0.62
CRNDE-208ENST00000560029 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
CRNDE-208ENST00000560029 MPNDQ8N594 471 aa11.15□□□□□ -0.62
CRNDE-208ENST00000560029 HRCP23327 699 aa11.14□□□□□ -0.63
CRNDE-208ENST00000560029 CABLES1Q8TDN4 633 aa11.14□□□□□ -0.63
CRNDE-208ENST00000560029 ZIC2O95409 532 aaPredicted RBP11.13□□□□□ -0.63
CRNDE-208ENST00000560029 NR3C2P08235 984 aa11.13□□□□□ -0.63
CRNDE-208ENST00000560029 ZC3H15Q8WU90 426 aaKnown RBP11.13□□□□□ -0.63
CRNDE-208ENST00000560029 ITPKCQ96DU7 683 aa11.13□□□□□ -0.63
CRNDE-208ENST00000560029 AGERQ15109 404 aa11.12□□□□□ -0.63
CRNDE-208ENST00000560029 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
CRNDE-208ENST00000560029 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
CRNDE-208ENST00000560029 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
CRNDE-208ENST00000560029 CDK15Q96Q40 435 aa11.11□□□□□ -0.63
CRNDE-208ENST00000560029 F12P00748 615 aaPredicted RBP11.1□□□□□ -0.63
CRNDE-208ENST00000560029 TSC1Q92574 1164 aa11.1□□□□□ -0.63
CRNDE-208ENST00000560029 SPTLC1O15269 473 aa11.09□□□□□ -0.63
CRNDE-208ENST00000560029 MAN1A2O60476 641 aa11.09□□□□□ -0.63
CRNDE-208ENST00000560029 GRM5P41594 1212 aa11.09□□□□□ -0.63
CRNDE-208ENST00000560029 RIC3Q7Z5B4 369 aa11.09□□□□□ -0.63
CRNDE-208ENST00000560029 ZBTB3Q9H5J0 574 aa11.09□□□□□ -0.63
CRNDE-208ENST00000560029 GJA5P36382 358 aa11.07□□□□□ -0.64
CRNDE-208ENST00000560029 BMP2P12643 396 aa11.06□□□□□ -0.64
CRNDE-208ENST00000560029 TRIM66O15016 1216 aa11.05□□□□□ -0.64
CRNDE-208ENST00000560029 NR5A1Q13285 461 aa11.04□□□□□ -0.64
CRNDE-208ENST00000560029 DIXDC1Q155Q3 683 aa11.04□□□□□ -0.64
CRNDE-208ENST00000560029 QPCTQ16769 361 aa11.04□□□□□ -0.64
CRNDE-208ENST00000560029 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
CRNDE-208ENST00000560029 BPHLQ86WA6 291 aaPredicted RBP11.03□□□□□ -0.64
CRNDE-208ENST00000560029 LIMD1Q9UGP4 676 aa11.03□□□□□ -0.64
CRNDE-208ENST00000560029 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
CRNDE-208ENST00000560029 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
CRNDE-208ENST00000560029 VSIG8P0DPA2 414 aa11.02□□□□□ -0.65
CRNDE-208ENST00000560029 NUTM2DQ5VT03 806 aaPredicted RBP11.02□□□□□ -0.65
CRNDE-208ENST00000560029 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
CRNDE-208ENST00000560029 PRPF38BQ5VTL8 546 aaKnown RBP11.01□□□□□ -0.65
CRNDE-208ENST00000560029 LINC00528Q8N1L1 170 aa11.01□□□□□ -0.65
CRNDE-208ENST00000560029 UPP2O95045 317 aa11□□□□□ -0.65
CRNDE-208ENST00000560029 FSHRP23945 695 aa11□□□□□ -0.65
CRNDE-208ENST00000560029 DNMT3LQ9UJW3 386 aa11□□□□□ -0.65
CRNDE-208ENST00000560029 MAGEB6P1A0A0J9YX57 407 aa10.99□□□□□ -0.65
CRNDE-208ENST00000560029 MEIOBQ8N635 442 aa10.99□□□□□ -0.65
CRNDE-208ENST00000560029 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
CRNDE-208ENST00000560029 RTL5Q5HYW3 569 aaPredicted RBP10.97□□□□□ -0.65
CRNDE-208ENST00000560029 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
CRNDE-208ENST00000560029 VASH1Q7L8A9 365 aaPredicted RBP10.97□□□□□ -0.65
CRNDE-208ENST00000560029 GPR161Q8N6U8 529 aaKnown RBP10.96□□□□□ -0.65
CRNDE-208ENST00000560029 AK7Q96M32 723 aa10.96□□□□□ -0.65
CRNDE-208ENST00000560029 CARD14Q9BXL6 1004 aa10.96□□□□□ -0.65
CRNDE-208ENST00000560029 SH3RF1Q7Z6J0 888 aa10.95□□□□□ -0.66
CRNDE-208ENST00000560029 C1QTNF2Q9BXJ5 285 aa10.95□□□□□ -0.66
CRNDE-208ENST00000560029 FIGNL2A6NMB9 653 aa10.94□□□□□ -0.66
CRNDE-208ENST00000560029 LILRB3O75022 631 aa10.94□□□□□ -0.66
CRNDE-208ENST00000560029 SH3BP5LQ7L8J4 393 aa10.93□□□□□ -0.66
CRNDE-208ENST00000560029 SLC24A3Q9HC58 644 aa10.93□□□□□ -0.66
CRNDE-208ENST00000560029 KRT76Q01546 638 aa10.92□□□□□ -0.66
CRNDE-208ENST00000560029 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
CRNDE-208ENST00000560029 CNTNAP3BQ96NU0 1288 aa10.92□□□□□ -0.66
CRNDE-208ENST00000560029 CNTNAP3Q9BZ76 1288 aa10.92□□□□□ -0.66
CRNDE-208ENST00000560029 LOC100996750A0A140TA64 210 aa10.91□□□□□ -0.66
CRNDE-208ENST00000560029 CBLBQ13191 982 aa10.91□□□□□ -0.66
CRNDE-208ENST00000560029 NBPF14Q5TI25 921 aa10.91□□□□□ -0.66
CRNDE-208ENST00000560029 CCDC116Q8IYX3 515 aa10.91□□□□□ -0.66
CRNDE-208ENST00000560029 KCTD17Q8N5Z5 321 aa10.91□□□□□ -0.66
CRNDE-208ENST00000560029 TSEN34Q9BSV6 310 aaKnown RBP10.91□□□□□ -0.66
CRNDE-208ENST00000560029 KRTAP4-6Q9BYQ5 205 aa10.91□□□□□ -0.66
CRNDE-208ENST00000560029 TTLL8A6PVC2 850 aa10.9□□□□□ -0.66
CRNDE-208ENST00000560029 PTSQ03393 145 aa10.9□□□□□ -0.66
CRNDE-208ENST00000560029 PDE4DQ08499 809 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms