RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 POLR3AO14802 1390 aaPredicted RBP12.66□□□□□ -0.38
SEMA4B-214ENST00000560003 AFF2P51816 1311 aa12.65□□□□□ -0.38
SEMA4B-214ENST00000560003 RXRBP28702 533 aa12.65□□□□□ -0.38
SEMA4B-214ENST00000560003 TMF1P82094 1093 aa12.65□□□□□ -0.38
SEMA4B-214ENST00000560003 FNBP4Q8N3X1 1017 aaPredicted RBP12.65□□□□□ -0.38
SEMA4B-214ENST00000560003 ABTB2Q8N961 1025 aa12.65□□□□□ -0.38
SEMA4B-214ENST00000560003 QTRT2Q9H974 415 aaKnown RBP12.65□□□□□ -0.38
SEMA4B-214ENST00000560003 ATP7BP35670 1465 aa12.65□□□□□ -0.38
SEMA4B-214ENST00000560003 PPIP5K1Q6PFW1 1433 aa12.64□□□□□ -0.39
SEMA4B-214ENST00000560003 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
SEMA4B-214ENST00000560003 NLRP13Q86W25 1043 aa12.64□□□□□ -0.39
SEMA4B-214ENST00000560003 USP21Q9UK80 565 aa12.64□□□□□ -0.39
SEMA4B-214ENST00000560003 SOCS7O14512 581 aa12.63□□□□□ -0.39
SEMA4B-214ENST00000560003 POTEAQ6S8J7 498 aa12.63□□□□□ -0.39
SEMA4B-214ENST00000560003 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
SEMA4B-214ENST00000560003 TMC1Q8TDI8 760 aa12.63□□□□□ -0.39
SEMA4B-214ENST00000560003 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
SEMA4B-214ENST00000560003 TRPC5Q9UL62 973 aaPredicted RBP12.63□□□□□ -0.39
SEMA4B-214ENST00000560003 LRP6O75581 1613 aa12.62□□□□□ -0.39
SEMA4B-214ENST00000560003 USP47Q96K76 1375 aa12.61□□□□□ -0.39
SEMA4B-214ENST00000560003 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
SEMA4B-214ENST00000560003 RBM6P78332 1123 aaKnown RBP12.61□□□□□ -0.39
SEMA4B-214ENST00000560003 CABLES1Q8TDN4 633 aa12.61□□□□□ -0.39
SEMA4B-214ENST00000560003 TESK2Q96S53 571 aa12.61□□□□□ -0.39
SEMA4B-214ENST00000560003 USP32Q8NFA0 1604 aa12.6□□□□□ -0.39
SEMA4B-214ENST00000560003 EIF4G2P78344 907 aaKnown RBP eCLIP12.6□□□□□ -0.39
SEMA4B-214ENST00000560003 UNC5CLQ8IV45 518 aa12.6□□□□□ -0.39
SEMA4B-214ENST00000560003 RTN4Q9NQC3 1192 aaKnown RBP12.6□□□□□ -0.39
SEMA4B-214ENST00000560003 NINLQ9Y2I6 1382 aa12.59□□□□□ -0.39
SEMA4B-214ENST00000560003 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
SEMA4B-214ENST00000560003 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
SEMA4B-214ENST00000560003 QRICH2Q9H0J4 1663 aa12.58□□□□□ -0.4
SEMA4B-214ENST00000560003 FAM83GA6ND36 823 aa12.58□□□□□ -0.4
SEMA4B-214ENST00000560003 NLRP6P59044 892 aa12.58□□□□□ -0.4
SEMA4B-214ENST00000560003 KTN1Q86UP2 1357 aaKnown RBP12.57□□□□□ -0.4
SEMA4B-214ENST00000560003 ITSN1Q15811 1721 aa12.57□□□□□ -0.4
SEMA4B-214ENST00000560003 NUTM2GQ5VZR2 741 aa12.57□□□□□ -0.4
SEMA4B-214ENST00000560003 KCNH5Q8NCM2 988 aa12.57□□□□□ -0.4
SEMA4B-214ENST00000560003 SLC12A5Q9H2X9 1139 aa12.57□□□□□ -0.4
SEMA4B-214ENST00000560003 PRDM11Q9NQV5 511 aa12.57□□□□□ -0.4
SEMA4B-214ENST00000560003 RGPD8O14715 1765 aaPredicted RBP12.56□□□□□ -0.4
SEMA4B-214ENST00000560003 USP6P35125 1406 aa12.56□□□□□ -0.4
SEMA4B-214ENST00000560003 GCP02774 474 aa12.56□□□□□ -0.4
SEMA4B-214ENST00000560003 TTC21BQ7Z4L5 1316 aa12.56□□□□□ -0.4
SEMA4B-214ENST00000560003 EVA1CP58658 441 aa12.55□□□□□ -0.4
SEMA4B-214ENST00000560003 GJD4Q96KN9 370 aaPredicted RBP12.55□□□□□ -0.4
SEMA4B-214ENST00000560003 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-214ENST00000560003 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-214ENST00000560003 VPS72Q15906 364 aa12.54□□□□□ -0.4
SEMA4B-214ENST00000560003 BTG4Q9NY30 223 aa12.54□□□□□ -0.4
SEMA4B-214ENST00000560003 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-214ENST00000560003 HOXD11P31277 338 aaPredicted RBP12.53□□□□□ -0.4
SEMA4B-214ENST00000560003 USP19O94966 1318 aa12.53□□□□□ -0.4
SEMA4B-214ENST00000560003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEMA4B-214ENST00000560003 SSH2Q76I76 1423 aa12.52□□□□□ -0.41
SEMA4B-214ENST00000560003 BCL9LQ86UU0 1499 aa12.52□□□□□ -0.41
SEMA4B-214ENST00000560003 CDK12Q9NYV4 1490 aaPredicted RBP12.52□□□□□ -0.41
SEMA4B-214ENST00000560003 CPDO75976 1380 aa12.51□□□□□ -0.41
SEMA4B-214ENST00000560003 KIAA0232Q92628 1395 aa12.51□□□□□ -0.41
SEMA4B-214ENST00000560003 ATRNO75882 1429 aa12.51□□□□□ -0.41
SEMA4B-214ENST00000560003 SLIT2O94813 1529 aa12.51□□□□□ -0.41
SEMA4B-214ENST00000560003 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
SEMA4B-214ENST00000560003 EDC4Q6P2E9 1401 aaKnown RBP12.5□□□□□ -0.41
SEMA4B-214ENST00000560003 TOPAZ1Q8N9V7 1692 aa12.5□□□□□ -0.41
SEMA4B-214ENST00000560003 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
SEMA4B-214ENST00000560003 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
SEMA4B-214ENST00000560003 USP31Q70CQ4 1352 aa12.48□□□□□ -0.41
SEMA4B-214ENST00000560003 ANKRD36BQ8N2N9 1353 aa12.48□□□□□ -0.41
SEMA4B-214ENST00000560003 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
SEMA4B-214ENST00000560003 COG3Q96JB2 828 aa12.48□□□□□ -0.41
SEMA4B-214ENST00000560003 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
SEMA4B-214ENST00000560003 A0A1W2PP64 1363 aa12.47□□□□□ -0.41
SEMA4B-214ENST00000560003 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
SEMA4B-214ENST00000560003 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
SEMA4B-214ENST00000560003 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
SEMA4B-214ENST00000560003 ARHGEF25Q86VW2 580 aa12.47□□□□□ -0.41
SEMA4B-214ENST00000560003 POLR3GLQ9BT43 218 aa12.47□□□□□ -0.41
SEMA4B-214ENST00000560003 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
SEMA4B-214ENST00000560003 AATKQ6ZMQ8 1374 aa12.46□□□□□ -0.41
SEMA4B-214ENST00000560003 NME9Q86XW9 330 aa12.46□□□□□ -0.41
SEMA4B-214ENST00000560003 SPATA31A5Q5VU36 1347 aa12.45□□□□□ -0.42
SEMA4B-214ENST00000560003 SPATA31A7Q8IWB4 1347 aa12.45□□□□□ -0.42
SEMA4B-214ENST00000560003 A0A0G2JS52 829 aa12.45□□□□□ -0.42
SEMA4B-214ENST00000560003 SOX12O15370 315 aa12.45□□□□□ -0.42
SEMA4B-214ENST00000560003 MYT1Q01538 1121 aa12.45□□□□□ -0.42
SEMA4B-214ENST00000560003 SEPT12Q8IYM1 358 aa12.45□□□□□ -0.42
SEMA4B-214ENST00000560003 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
SEMA4B-214ENST00000560003 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
SEMA4B-214ENST00000560003 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
SEMA4B-214ENST00000560003 SPATA31A1Q5TZJ5 1347 aa12.43□□□□□ -0.42
SEMA4B-214ENST00000560003 CSB-PGBD3P0DP91 1061 aa12.43□□□□□ -0.42
SEMA4B-214ENST00000560003 FAM98CQ17RN3 349 aaKnown RBP12.43□□□□□ -0.42
SEMA4B-214ENST00000560003 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
SEMA4B-214ENST00000560003 COL14A1Q05707 1796 aaKnown RBP12.43□□□□□ -0.42
SEMA4B-214ENST00000560003 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
SEMA4B-214ENST00000560003 FYB1O15117 783 aa12.42□□□□□ -0.42
SEMA4B-214ENST00000560003 BARGINQ6ZT62 677 aa12.42□□□□□ -0.42
SEMA4B-214ENST00000560003 TOM1L2Q6ZVM7 507 aa12.42□□□□□ -0.42
SEMA4B-214ENST00000560003 KRT27Q7Z3Y8 459 aa12.42□□□□□ -0.42
SEMA4B-214ENST00000560003 CDCA7Q9BWT1 371 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms