RNA–Protein interactions for RNA: ENST00000558385.1

LINC00593-201, long intergenic non-protein coding RNA 593, humanhuman

TSL 3

Gene LINC00593, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-201ENST00000558385 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
LINC00593-201ENST00000558385 NPHP3Q7Z494 1330 aa16.53■□□□□ 0.24
LINC00593-201ENST00000558385 FOXO3O43524 673 aa16.53■□□□□ 0.24
LINC00593-201ENST00000558385 USP6P35125 1406 aa16.53■□□□□ 0.24
LINC00593-201ENST00000558385 EDC4Q6P2E9 1401 aaKnown RBP16.53■□□□□ 0.24
LINC00593-201ENST00000558385 SSH2Q76I76 1423 aa16.53■□□□□ 0.24
LINC00593-201ENST00000558385 PSME1Q06323 249 aa16.52■□□□□ 0.24
LINC00593-201ENST00000558385 KNSTRNQ9Y448 316 aa16.52■□□□□ 0.24
LINC00593-201ENST00000558385 MON2Q7Z3U7 1717 aa16.52■□□□□ 0.24
LINC00593-201ENST00000558385 NPC1L1Q9UHC9 1359 aa16.51■□□□□ 0.23
LINC00593-201ENST00000558385 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
LINC00593-201ENST00000558385 KRT28Q7Z3Y7 464 aa16.5■□□□□ 0.23
LINC00593-201ENST00000558385 SOS2Q07890 1332 aaPredicted RBP16.49■□□□□ 0.23
LINC00593-201ENST00000558385 TTC21BQ7Z4L5 1316 aa16.49■□□□□ 0.23
LINC00593-201ENST00000558385 ROBO1Q9Y6N7 1651 aa16.49■□□□□ 0.23
LINC00593-201ENST00000558385 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
LINC00593-201ENST00000558385 NSD3Q9BZ95 1437 aa16.48■□□□□ 0.23
LINC00593-201ENST00000558385 AMER1Q5JTC6 1135 aaPredicted RBP16.48■□□□□ 0.23
LINC00593-201ENST00000558385 SBNO1A3KN83 1393 aa16.48■□□□□ 0.23
LINC00593-201ENST00000558385 NHSL1Q5SYE7 1610 aa16.48■□□□□ 0.23
LINC00593-201ENST00000558385 NSD2O96028 1365 aa16.47■□□□□ 0.23
LINC00593-201ENST00000558385 AHDC1Q5TGY3 1603 aaPredicted RBP16.46■□□□□ 0.23
LINC00593-201ENST00000558385 FYB1O15117 783 aa16.46■□□□□ 0.23
LINC00593-201ENST00000558385 PXDNQ92626 1479 aa16.46■□□□□ 0.23
LINC00593-201ENST00000558385 NRKQ7Z2Y5 1582 aa16.46■□□□□ 0.23
LINC00593-201ENST00000558385 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
LINC00593-201ENST00000558385 USP31Q70CQ4 1352 aa16.44■□□□□ 0.22
LINC00593-201ENST00000558385 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
LINC00593-201ENST00000558385 DDX17Q92841 729 aaKnown RBP16.43■□□□□ 0.22
LINC00593-201ENST00000558385 SPATA31A3Q5VYP0 1347 aa16.43■□□□□ 0.22
LINC00593-201ENST00000558385 RALBP1Q15311 655 aa16.42■□□□□ 0.22
LINC00593-201ENST00000558385 ABTB2Q8N961 1025 aa16.42■□□□□ 0.22
LINC00593-201ENST00000558385 LRRC59Q96AG4 307 aaKnown RBP16.42■□□□□ 0.22
LINC00593-201ENST00000558385 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
LINC00593-201ENST00000558385 XPCQ01831 940 aaPredicted RBP16.41■□□□□ 0.22
LINC00593-201ENST00000558385 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
LINC00593-201ENST00000558385 USP54Q70EL1 1684 aa16.4■□□□□ 0.22
LINC00593-201ENST00000558385 ALS2Q96Q42 1657 aa16.4■□□□□ 0.22
LINC00593-201ENST00000558385 ARHGEF10O15013 1369 aa16.4■□□□□ 0.22
LINC00593-201ENST00000558385 TNS3Q68CZ2 1445 aa16.4■□□□□ 0.22
LINC00593-201ENST00000558385 NLRP13Q86W25 1043 aa16.4■□□□□ 0.22
LINC00593-201ENST00000558385 NME9Q86XW9 330 aa16.4■□□□□ 0.22
LINC00593-201ENST00000558385 NLRP6P59044 892 aa16.39■□□□□ 0.21
LINC00593-201ENST00000558385 COG3Q96JB2 828 aa16.39■□□□□ 0.21
LINC00593-201ENST00000558385 ANKRD26Q9UPS8 1709 aa16.39■□□□□ 0.21
LINC00593-201ENST00000558385 PIK3C2AO00443 1686 aa16.38■□□□□ 0.21
LINC00593-201ENST00000558385 UPF1Q92900 1129 aaKnown RBP eCLIP16.38■□□□□ 0.21
LINC00593-201ENST00000558385 GGNBP2Q9H3C7 697 aa16.38■□□□□ 0.21
LINC00593-201ENST00000558385 PHLPP1O60346 1717 aa16.38■□□□□ 0.21
LINC00593-201ENST00000558385 OVOS2A0A0J9YW53 1432 aa16.37■□□□□ 0.21
LINC00593-201ENST00000558385 OVOS2Q6IE36 1432 aa16.37■□□□□ 0.21
LINC00593-201ENST00000558385 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
LINC00593-201ENST00000558385 MORC1Q86VD1 984 aa16.37■□□□□ 0.21
LINC00593-201ENST00000558385 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
LINC00593-201ENST00000558385 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
LINC00593-201ENST00000558385 COL16A1Q07092 1604 aaPredicted RBP16.36■□□□□ 0.21
LINC00593-201ENST00000558385 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
LINC00593-201ENST00000558385 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
LINC00593-201ENST00000558385 USP19O94966 1318 aa16.35■□□□□ 0.21
LINC00593-201ENST00000558385 LMOD2Q6P5Q4 547 aa16.34■□□□□ 0.21
LINC00593-201ENST00000558385 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
LINC00593-201ENST00000558385 MARF1Q9Y4F3 1742 aaKnown RBP16.33■□□□□ 0.2
LINC00593-201ENST00000558385 HNRNPUQ00839 825 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00593-201ENST00000558385 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
LINC00593-201ENST00000558385 JCADQ9P266 1359 aa16.32■□□□□ 0.2
LINC00593-201ENST00000558385 COL22A1Q8NFW1 1626 aaPredicted RBP16.31■□□□□ 0.2
LINC00593-201ENST00000558385 SLIT3O75094 1523 aa16.31■□□□□ 0.2
LINC00593-201ENST00000558385 PNPLA6Q8IY17 1366 aa16.31■□□□□ 0.2
LINC00593-201ENST00000558385 GCP02774 474 aa16.31■□□□□ 0.2
LINC00593-201ENST00000558385 NUTM2GQ5VZR2 741 aa16.31■□□□□ 0.2
LINC00593-201ENST00000558385 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
LINC00593-201ENST00000558385 MYBBP1AQ9BQG0 1328 aaKnown RBP16.3■□□□□ 0.2
LINC00593-201ENST00000558385 PELP1Q8IZL8 1130 aaKnown RBP16.3■□□□□ 0.2
LINC00593-201ENST00000558385 SUPT16HQ9Y5B9 1047 aaKnown RBP16.3■□□□□ 0.2
LINC00593-201ENST00000558385 MAP2P11137 1827 aaKnown RBP16.29■□□□□ 0.2
LINC00593-201ENST00000558385 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
LINC00593-201ENST00000558385 CCDC184Q52MB2 194 aa16.29■□□□□ 0.2
LINC00593-201ENST00000558385 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
LINC00593-201ENST00000558385 INSRP06213 1382 aa16.28■□□□□ 0.2
LINC00593-201ENST00000558385 KIF24Q5T7B8 1368 aa16.28■□□□□ 0.2
LINC00593-201ENST00000558385 SHPRHQ149N8 1683 aa16.27■□□□□ 0.2
LINC00593-201ENST00000558385 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
LINC00593-201ENST00000558385 ERICH6BQ5W0A0 696 aa16.27■□□□□ 0.2
LINC00593-201ENST00000558385 PNISRQ8TF01 805 aaKnown RBP16.27■□□□□ 0.2
LINC00593-201ENST00000558385 POLKQ9UBT6 870 aa16.27■□□□□ 0.2
LINC00593-201ENST00000558385 NFAT5O94916 1531 aa16.26■□□□□ 0.19
LINC00593-201ENST00000558385 NEFLP07196 543 aa16.26■□□□□ 0.19
LINC00593-201ENST00000558385 ZNF772Q68DY9 489 aaPredicted RBP16.26■□□□□ 0.19
LINC00593-201ENST00000558385 ARHGEF25Q86VW2 580 aa16.26■□□□□ 0.19
LINC00593-201ENST00000558385 CPDO75976 1380 aa16.26■□□□□ 0.19
LINC00593-201ENST00000558385 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
LINC00593-201ENST00000558385 CABLES1Q8TDN4 633 aa16.25■□□□□ 0.19
LINC00593-201ENST00000558385 LRP6O75581 1613 aa16.25■□□□□ 0.19
LINC00593-201ENST00000558385 PHRF1Q9P1Y6 1649 aaKnown RBP16.25■□□□□ 0.19
LINC00593-201ENST00000558385 SMG6Q86US8 1419 aaKnown RBP16.25■□□□□ 0.19
LINC00593-201ENST00000558385 SPATA31A6Q5VVP1 1343 aa16.24■□□□□ 0.19
LINC00593-201ENST00000558385 MTHFSP49914 203 aa16.24■□□□□ 0.19
LINC00593-201ENST00000558385 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
LINC00593-201ENST00000558385 MAP3K19Q56UN5 1328 aa16.23■□□□□ 0.19
LINC00593-201ENST00000558385 ABCA3Q99758 1704 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms