RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
SEMA4B-204ENST00000558065 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
SEMA4B-204ENST00000558065 ZNF513Q8N8E2 541 aaPredicted RBP13.41□□□□□ -0.26
SEMA4B-204ENST00000558065 RBM28Q9NW13 759 aaKnown RBP13.41□□□□□ -0.26
SEMA4B-204ENST00000558065 LRCH2Q5VUJ6 765 aa13.41□□□□□ -0.26
SEMA4B-204ENST00000558065 ITFG2Q969R8 447 aa13.41□□□□□ -0.26
SEMA4B-204ENST00000558065 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
SEMA4B-204ENST00000558065 BIRC2Q13490 618 aa13.41□□□□□ -0.26
SEMA4B-204ENST00000558065 MAFGO15525 162 aa13.4□□□□□ -0.26
SEMA4B-204ENST00000558065 IGHDP01880 384 aa13.4□□□□□ -0.26
SEMA4B-204ENST00000558065 NPM1P06748 294 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEMA4B-204ENST00000558065 SSR1P43307 286 aaKnown RBP13.4□□□□□ -0.26
SEMA4B-204ENST00000558065 DIAPH3Q9NSV4 1193 aa13.4□□□□□ -0.26
SEMA4B-204ENST00000558065 AK9Q5TCS8 1911 aa13.4□□□□□ -0.27
SEMA4B-204ENST00000558065 MAP9Q49MG5 647 aa13.39□□□□□ -0.27
SEMA4B-204ENST00000558065 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
SEMA4B-204ENST00000558065 ATAD2BQ9ULI0 1458 aa13.39□□□□□ -0.27
SEMA4B-204ENST00000558065 JMYQ8N9B5 988 aa13.39□□□□□ -0.27
SEMA4B-204ENST00000558065 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
SEMA4B-204ENST00000558065 ARID4AP29374 1257 aaPredicted RBP13.39□□□□□ -0.27
SEMA4B-204ENST00000558065 CHAF1AQ13111 956 aaPredicted RBP13.39□□□□□ -0.27
SEMA4B-204ENST00000558065 CAVIN1Q6NZI2 390 aaKnown RBP13.38□□□□□ -0.27
SEMA4B-204ENST00000558065 KIF27Q86VH2 1401 aa13.38□□□□□ -0.27
SEMA4B-204ENST00000558065 CCDC91Q7Z6B0 441 aa13.38□□□□□ -0.27
SEMA4B-204ENST00000558065 PACS2Q86VP3 889 aa13.38□□□□□ -0.27
SEMA4B-204ENST00000558065 KIF1BPQ96EK5 621 aa13.38□□□□□ -0.27
SEMA4B-204ENST00000558065 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
SEMA4B-204ENST00000558065 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
SEMA4B-204ENST00000558065 CHIC2Q9UKJ5 165 aa13.37□□□□□ -0.27
SEMA4B-204ENST00000558065 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
SEMA4B-204ENST00000558065 HSCBQ8IWL3 235 aa13.37□□□□□ -0.27
SEMA4B-204ENST00000558065 GOLGA6L6A8MZA4 724 aa13.36□□□□□ -0.27
SEMA4B-204ENST00000558065 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
SEMA4B-204ENST00000558065 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
SEMA4B-204ENST00000558065 PPP2R5AQ15172 486 aa13.36□□□□□ -0.27
SEMA4B-204ENST00000558065 DNAJC14Q6Y2X3 702 aaPredicted RBP13.35□□□□□ -0.27
SEMA4B-204ENST00000558065 ZNF526Q8TF50 670 aaPredicted RBP13.35□□□□□ -0.27
SEMA4B-204ENST00000558065 NAA30Q147X3 362 aaPredicted RBP13.35□□□□□ -0.27
SEMA4B-204ENST00000558065 E2F4Q16254 413 aa13.35□□□□□ -0.27
SEMA4B-204ENST00000558065 RPS6KL1Q9Y6S9 549 aa13.35□□□□□ -0.27
SEMA4B-204ENST00000558065 UACAQ9BZF9 1416 aa13.35□□□□□ -0.27
SEMA4B-204ENST00000558065 C22orf23Q9BZE7 217 aa13.35□□□□□ -0.27
SEMA4B-204ENST00000558065 CT47B1P0C2W7 299 aaPredicted RBP13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 CC2D2BQ6DHV5 1058 aa13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 BAG4O95429 457 aaKnown RBP13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 SSFA2P28290 1259 aa13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 BCORL1Q5H9F3 1711 aa13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 MTUS2Q5JR59 1369 aa13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 LRSAM1Q6UWE0 723 aa13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 SRLQ86TD4 932 aa13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
SEMA4B-204ENST00000558065 A0A1B0GUL7 405 aa13.33□□□□□ -0.27
SEMA4B-204ENST00000558065 KMT5BQ4FZB7 885 aa13.33□□□□□ -0.27
SEMA4B-204ENST00000558065 KIF3CO14782 793 aa13.33□□□□□ -0.28
SEMA4B-204ENST00000558065 BMS1Q14692 1282 aaKnown RBP13.33□□□□□ -0.28
SEMA4B-204ENST00000558065 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
SEMA4B-204ENST00000558065 ZNF777Q9ULD5 760 aaPredicted RBP13.33□□□□□ -0.28
SEMA4B-204ENST00000558065 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.28
SEMA4B-204ENST00000558065 MPHOSPH10O00566 681 aaKnown RBP13.33□□□□□ -0.28
SEMA4B-204ENST00000558065 SUGP1Q8IWZ8 645 aaKnown RBP13.32□□□□□ -0.28
SEMA4B-204ENST00000558065 GOLGA6L22H0YM25 854 aa13.32□□□□□ -0.28
SEMA4B-204ENST00000558065 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
SEMA4B-204ENST00000558065 RPAINQ86UA6 219 aa13.32□□□□□ -0.28
SEMA4B-204ENST00000558065 SNX21Q969T3 373 aa13.32□□□□□ -0.28
SEMA4B-204ENST00000558065 MRVI1Q9Y6F6 885 aa13.32□□□□□ -0.28
SEMA4B-204ENST00000558065 KRBA2Q6ZNG9 492 aa13.32□□□□□ -0.28
SEMA4B-204ENST00000558065 CCDC96Q2M329 555 aa13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 GPT2Q8TD30 523 aa13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 DEF6Q9H4E7 631 aa13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 LMBRD1Q9NUN5 540 aa13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 CCDC18Q5T9S5 1454 aa13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 IPO8O15397 1037 aaKnown RBP13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 RBM5P52756 815 aaKnown RBP eCLIP13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 TRDNQ13061 729 aa13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 TTC31Q49AM3 519 aaPredicted RBP13.31□□□□□ -0.28
SEMA4B-204ENST00000558065 MTA1Q13330 715 aa13.3□□□□□ -0.28
SEMA4B-204ENST00000558065 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
SEMA4B-204ENST00000558065 AQRO60306 1485 aaKnown RBP eCLIP13.3□□□□□ -0.281e-7■■■■■ 34.3
SEMA4B-204ENST00000558065 ZMYM4Q5VZL5 1548 aa13.3□□□□□ -0.28
SEMA4B-204ENST00000558065 ANKRD33BA6NCL7 494 aa13.3□□□□□ -0.28
SEMA4B-204ENST00000558065 KIAA1524Q8TCG1 905 aa13.3□□□□□ -0.28
SEMA4B-204ENST00000558065 ANKRD23Q86SG2 305 aa13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 GOLGA6L1Q8N7Z2 621 aa13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 KANK1Q14678 1352 aa13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 ZNF397Q8NF99 534 aaPredicted RBP13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 RRP15Q9Y3B9 282 aaKnown RBP13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 PLEKHD1A6NEE1 506 aa13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 C1QTNF12Q5T7M4 302 aa13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 TXLNBQ8N3L3 684 aa13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 TBC1D22AQ8WUA7 517 aa13.29□□□□□ -0.28
SEMA4B-204ENST00000558065 MAP2K2P36507 400 aa13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 MCTP2Q6DN12 878 aa13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 KCNA4P22459 653 aa13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 CCT2P78371 535 aaKnown RBP13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 RNF214Q8ND24 703 aa13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 BLMP54132 1417 aaPredicted RBP13.28□□□□□ -0.28
SEMA4B-204ENST00000558065 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms