RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PLEKHF1Q96S99 279 aa14.88□□□□□ -0.03
VIPAS39-211ENST00000557658 CD109Q6YHK3 1445 aa14.88□□□□□ -0.03
VIPAS39-211ENST00000557658 UBE2Q2Q8WVN8 375 aa14.87□□□□□ -0.03
VIPAS39-211ENST00000557658 NOB1Q9ULX3 412 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-211ENST00000557658 IPO8O15397 1037 aaKnown RBP14.87□□□□□ -0.03
VIPAS39-211ENST00000557658 TRIM35Q9UPQ4 493 aa14.87□□□□□ -0.03
VIPAS39-211ENST00000557658 MRE11P49959 708 aa14.86□□□□□ -0.03
VIPAS39-211ENST00000557658 KIF16BQ96L93 1317 aa14.86□□□□□ -0.03
VIPAS39-211ENST00000557658 TMEM57Q8N5G2 664 aa14.86□□□□□ -0.03
VIPAS39-211ENST00000557658 ZBTB40Q9NUA8 1239 aa14.86□□□□□ -0.03
VIPAS39-211ENST00000557658 NCOA3Q9Y6Q9 1424 aa14.85□□□□□ -0.03
VIPAS39-211ENST00000557658 CABP2Q9NPB3 220 aa14.85□□□□□ -0.03
VIPAS39-211ENST00000557658 RBM25P49756 843 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-211ENST00000557658 SNX21Q969T3 373 aa14.85□□□□□ -0.03
VIPAS39-211ENST00000557658 ZNF692Q9BU19 519 aaPredicted RBP14.85□□□□□ -0.03
VIPAS39-211ENST00000557658 ISY1Q9ULR0 285 aaKnown RBP14.85□□□□□ -0.03
VIPAS39-211ENST00000557658 PANK2Q9BZ23 570 aa14.84□□□□□ -0.03
VIPAS39-211ENST00000557658 COL3A1P02461 1466 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-211ENST00000557658 VGFO15240 615 aaPredicted RBP14.84□□□□□ -0.03
VIPAS39-211ENST00000557658 NUCB1Q02818 461 aa14.84□□□□□ -0.03
VIPAS39-211ENST00000557658 HECW2Q9P2P5 1572 aa14.83□□□□□ -0.04
VIPAS39-211ENST00000557658 A0A1W2PP64 1363 aa14.83□□□□□ -0.04
VIPAS39-211ENST00000557658 GGT6Q6P531 493 aa14.83□□□□□ -0.04
VIPAS39-211ENST00000557658 PNNQ9H307 717 aaKnown RBP14.83□□□□□ -0.04
VIPAS39-211ENST00000557658 CLCN1P35523 988 aa14.82□□□□□ -0.04
VIPAS39-211ENST00000557658 DDIT3P35638 169 aa14.82□□□□□ -0.04
VIPAS39-211ENST00000557658 RIPK4P57078 832 aa14.82□□□□□ -0.04
VIPAS39-211ENST00000557658 ALDH1L2Q3SY69 923 aa14.82□□□□□ -0.04
VIPAS39-211ENST00000557658 CIZ1Q9ULV3 898 aaPredicted RBP14.82□□□□□ -0.04
VIPAS39-211ENST00000557658 ANKRD26Q9UPS8 1709 aa14.82□□□□□ -0.04
VIPAS39-211ENST00000557658 CAMSAP1Q5T5Y3 1602 aa14.82□□□□□ -0.04
VIPAS39-211ENST00000557658 GGNBP2Q9H3C7 697 aa14.81□□□□□ -0.04
VIPAS39-211ENST00000557658 CHD1LQ86WJ1 897 aa14.81□□□□□ -0.04
VIPAS39-211ENST00000557658 LNPKQ9C0E8 428 aa14.81□□□□□ -0.04
VIPAS39-211ENST00000557658 GRPEL1Q9HAV7 217 aa14.81□□□□□ -0.04
VIPAS39-211ENST00000557658 ASXL2Q76L83 1435 aa14.81□□□□□ -0.04
VIPAS39-211ENST00000557658 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-211ENST00000557658 ABCC3O15438 1527 aa14.8□□□□□ -0.04
VIPAS39-211ENST00000557658 NEXMIFQ5QGS0 1516 aa14.8□□□□□ -0.04
VIPAS39-211ENST00000557658 SRPK2P78362 688 aaKnown RBP14.8□□□□□ -0.04
VIPAS39-211ENST00000557658 GBP4Q96PP9 640 aa14.8□□□□□ -0.04
VIPAS39-211ENST00000557658 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
VIPAS39-211ENST00000557658 MED14O60244 1454 aa14.8□□□□□ -0.04
VIPAS39-211ENST00000557658 PIK3C2BO00750 1634 aa14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 CFAP74Q9C0B2 1584 aa14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 PTMSP20962 102 aa14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 SAFB2Q14151 953 aaKnown RBP eCLIP14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 BMP2KLQ5H9B9 411 aa14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 NUTM2DQ5VT03 806 aaPredicted RBP14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 TNPO1Q92973 898 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 ZNF428Q96B54 188 aa14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 CHMP4BQ9H444 224 aaKnown RBP14.79□□□□□ -0.04
VIPAS39-211ENST00000557658 SKOR2Q2VWA4 1001 aaPredicted RBP14.78□□□□□ -0.04
VIPAS39-211ENST00000557658 ATAD2Q6PL18 1390 aa14.78□□□□□ -0.04
VIPAS39-211ENST00000557658 MLH3Q9UHC1 1453 aa14.78□□□□□ -0.04
VIPAS39-211ENST00000557658 FYB1O15117 783 aa14.78□□□□□ -0.04
VIPAS39-211ENST00000557658 POGZQ7Z3K3 1410 aa14.77□□□□□ -0.04
VIPAS39-211ENST00000557658 GCC1Q96CN9 775 aa14.77□□□□□ -0.04
VIPAS39-211ENST00000557658 NAP1L5Q96NT1 182 aaPredicted RBP14.77□□□□□ -0.04
VIPAS39-211ENST00000557658 SIGLEC1Q9BZZ2 1709 aa14.77□□□□□ -0.05
VIPAS39-211ENST00000557658 BRPF1P55201 1214 aaPredicted RBP14.77□□□□□ -0.05
VIPAS39-211ENST00000557658 RAB3GAP1Q15042 981 aa14.77□□□□□ -0.05
VIPAS39-211ENST00000557658 PNPLA6Q8IY17 1366 aa14.75□□□□□ -0.05
VIPAS39-211ENST00000557658 FCHSD2O94868 740 aa14.75□□□□□ -0.05
VIPAS39-211ENST00000557658 HSP90AA1P07900 732 aaKnown RBP14.75□□□□□ -0.05
VIPAS39-211ENST00000557658 ANKRD45Q5TZF3 282 aa14.75□□□□□ -0.05
VIPAS39-211ENST00000557658 ZFYVE9O95405 1425 aa14.75□□□□□ -0.05
VIPAS39-211ENST00000557658 STK26Q9P289 416 aa14.75□□□□□ -0.05
VIPAS39-211ENST00000557658 PPIP5K1Q6PFW1 1433 aa14.74□□□□□ -0.05
VIPAS39-211ENST00000557658 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 CLTCQ00610 1675 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 ZBTB7BO15156 539 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 HDGFL2Q7Z4V5 671 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 ARHGAP45Q92619 1136 aa14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 KIF2CQ99661 725 aa14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 LRRC7Q96NW7 1537 aa14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 CD163L1Q9NR16 1453 aa14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 KIF20BQ96Q89 1820 aa14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 ESPNB1AK53 854 aa14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 K7ELQ4 463 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 TRIM44Q96DX7 344 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-211ENST00000557658 PIK3R4Q99570 1358 aa14.72□□□□□ -0.05
VIPAS39-211ENST00000557658 MINK1Q8N4C8 1332 aaPredicted RBP14.72□□□□□ -0.05
VIPAS39-211ENST00000557658 CALD1Q05682 793 aaKnown RBP14.72□□□□□ -0.05
VIPAS39-211ENST00000557658 PTPRMP28827 1452 aa14.71□□□□□ -0.05
VIPAS39-211ENST00000557658 REREQ9P2R6 1566 aa14.71□□□□□ -0.05
VIPAS39-211ENST00000557658 PTCH1Q13635 1447 aa14.71□□□□□ -0.05
VIPAS39-211ENST00000557658 TBC1D9Q6ZT07 1266 aa14.71□□□□□ -0.05
VIPAS39-211ENST00000557658 MRPL50Q8N5N7 158 aaKnown RBP14.71□□□□□ -0.05
VIPAS39-211ENST00000557658 FAM135BQ49AJ0 1406 aa14.71□□□□□ -0.05
VIPAS39-211ENST00000557658 PRKAR2BP31323 418 aa14.71□□□□□ -0.06
VIPAS39-211ENST00000557658 GOLGA6L22H0YM25 854 aa14.7□□□□□ -0.06
VIPAS39-211ENST00000557658 VAMP4O75379 141 aa14.7□□□□□ -0.06
VIPAS39-211ENST00000557658 GAS2L3Q86XJ1 694 aa14.7□□□□□ -0.06
VIPAS39-211ENST00000557658 CD2BP2O95400 341 aaKnown RBP14.69□□□□□ -0.06
VIPAS39-211ENST00000557658 IDI1Q13907 227 aa14.69□□□□□ -0.06
VIPAS39-211ENST00000557658 PRAM1Q96QH2 718 aa14.69□□□□□ -0.06
VIPAS39-211ENST00000557658 C1orf115Q9H7X2 142 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms