RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 MCCP23508 829 aa13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 ERBINQ96RT1 1412 aa13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 E9PSI1 815 aa13.13□□□□□ -0.31
SUPT16H-207ENST00000557394 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
SUPT16H-207ENST00000557394 RICTORQ6R327 1708 aa13.13□□□□□ -0.31
SUPT16H-207ENST00000557394 MTERF4Q7Z6M4 381 aaKnown RBP13.13□□□□□ -0.31
SUPT16H-207ENST00000557394 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
SUPT16H-207ENST00000557394 CIZ1Q9ULV3 898 aaPredicted RBP13.12□□□□□ -0.31
SUPT16H-207ENST00000557394 C22orf23Q9BZE7 217 aa13.12□□□□□ -0.31
SUPT16H-207ENST00000557394 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
SUPT16H-207ENST00000557394 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 ATP7AQ04656 1500 aa13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 OS9Q13438 667 aaPredicted RBP13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 NUP155O75694 1391 aa13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 SPAG9O60271 1321 aaKnown RBP13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 COG6Q9Y2V7 657 aa13.11□□□□□ -0.31
SUPT16H-207ENST00000557394 AFAP1Q8N556 730 aa13.1□□□□□ -0.31
SUPT16H-207ENST00000557394 MAGI2Q86UL8 1455 aa13.1□□□□□ -0.31
SUPT16H-207ENST00000557394 HECW2Q9P2P5 1572 aa13.1□□□□□ -0.31
SUPT16H-207ENST00000557394 ZNF500O60304 480 aaPredicted RBP13.1□□□□□ -0.31
SUPT16H-207ENST00000557394 ANAPC15P60006 121 aa13.1□□□□□ -0.31
SUPT16H-207ENST00000557394 UTP14CQ5TAP6 766 aaKnown RBP13.1□□□□□ -0.31
SUPT16H-207ENST00000557394 SMC5Q8IY18 1101 aa13.1□□□□□ -0.31
SUPT16H-207ENST00000557394 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
SUPT16H-207ENST00000557394 KIDINS220Q9ULH0 1771 aa13.09□□□□□ -0.31
SUPT16H-207ENST00000557394 HSCBQ8IWL3 235 aa13.09□□□□□ -0.31
SUPT16H-207ENST00000557394 PANK1Q8TE04 598 aa13.09□□□□□ -0.31
SUPT16H-207ENST00000557394 SNX21Q969T3 373 aa13.09□□□□□ -0.31
SUPT16H-207ENST00000557394 GBP4Q96PP9 640 aa13.09□□□□□ -0.31
SUPT16H-207ENST00000557394 FRMPD1Q5SYB0 1578 aa13.09□□□□□ -0.31
SUPT16H-207ENST00000557394 DUOX2Q9NRD8 1548 aa13.09□□□□□ -0.31
SUPT16H-207ENST00000557394 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.31
SUPT16H-207ENST00000557394 RAB3GAP1Q15042 981 aa13.08□□□□□ -0.31
SUPT16H-207ENST00000557394 NBPF1Q3BBV0 1214 aa13.08□□□□□ -0.31
SUPT16H-207ENST00000557394 PCDHB15Q9Y5E8 787 aa13.08□□□□□ -0.31
SUPT16H-207ENST00000557394 MLH3Q9UHC1 1453 aa13.08□□□□□ -0.32
SUPT16H-207ENST00000557394 NASPP49321 788 aaPredicted RBP13.08□□□□□ -0.32
SUPT16H-207ENST00000557394 TMF1P82094 1093 aa13.08□□□□□ -0.32
SUPT16H-207ENST00000557394 SETQ01105 290 aaPredicted RBP13.08□□□□□ -0.32
SUPT16H-207ENST00000557394 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
SUPT16H-207ENST00000557394 DYNC1I1O14576 645 aa13.07□□□□□ -0.32
SUPT16H-207ENST00000557394 ARHGAP31Q2M1Z3 1444 aa13.07□□□□□ -0.32
SUPT16H-207ENST00000557394 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
SUPT16H-207ENST00000557394 NOL7Q9UMY1 257 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-207ENST00000557394 R3HCC1Q9Y3T6 440 aaKnown RBP13.06□□□□□ -0.32
SUPT16H-207ENST00000557394 FAM135AQ9P2D6 1515 aa13.06□□□□□ -0.32
SUPT16H-207ENST00000557394 NPC1L1Q9UHC9 1359 aa13.06□□□□□ -0.32
SUPT16H-207ENST00000557394 APAF1O14727 1248 aa13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 RWDD1Q9H446 243 aaPredicted RBP13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 EIF2AK4Q9P2K8 1649 aaKnown RBP13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 UQCRHP07919 91 aa13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 DMTNQ08495 405 aa13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 CLEC17AQ6ZS10 378 aa13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 GPATCH11Q8N954 259 aa13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 ANP32BQ92688 251 aaKnown RBP13.05□□□□□ -0.32
SUPT16H-207ENST00000557394 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
SUPT16H-207ENST00000557394 A2MP01023 1474 aa13.04□□□□□ -0.32
SUPT16H-207ENST00000557394 RAPGEF3O95398 923 aa13.04□□□□□ -0.32
SUPT16H-207ENST00000557394 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
SUPT16H-207ENST00000557394 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
SUPT16H-207ENST00000557394 ASXL1Q8IXJ9 1541 aa13.03□□□□□ -0.32
SUPT16H-207ENST00000557394 ABCA6Q8N139 1617 aa13.03□□□□□ -0.32
SUPT16H-207ENST00000557394 CCDC146Q8IYE0 955 aa13.03□□□□□ -0.32
SUPT16H-207ENST00000557394 PDLIM2Q96JY6 352 aa13.03□□□□□ -0.32
SUPT16H-207ENST00000557394 DNAJC2Q99543 621 aaKnown RBP13.03□□□□□ -0.32
SUPT16H-207ENST00000557394 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
SUPT16H-207ENST00000557394 SYNMO15061 1565 aa13.03□□□□□ -0.32
SUPT16H-207ENST00000557394 RAD21O60216 631 aa13.02□□□□□ -0.32
SUPT16H-207ENST00000557394 UNC13BO14795 1591 aa13.02□□□□□ -0.33
SUPT16H-207ENST00000557394 ZNF445P59923 1031 aa13.02□□□□□ -0.33
SUPT16H-207ENST00000557394 KLHL40Q2TBA0 621 aa13.02□□□□□ -0.33
SUPT16H-207ENST00000557394 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.33
SUPT16H-207ENST00000557394 RNF17Q9BXT8 1623 aaKnown RBP13.02□□□□□ -0.33
SUPT16H-207ENST00000557394 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
SUPT16H-207ENST00000557394 CSPP1Q1MSJ5 1256 aa13.01□□□□□ -0.33
SUPT16H-207ENST00000557394 C1orf115Q9H7X2 142 aa13.01□□□□□ -0.33
SUPT16H-207ENST00000557394 KDM4AO75164 1064 aa13.01□□□□□ -0.33
SUPT16H-207ENST00000557394 RLBP1P12271 317 aa13.01□□□□□ -0.33
SUPT16H-207ENST00000557394 MCM5P33992 734 aa13.01□□□□□ -0.33
SUPT16H-207ENST00000557394 FOXD4L5Q5VV16 416 aaPredicted RBP13.01□□□□□ -0.33
SUPT16H-207ENST00000557394 FOXD4L4Q8WXT5 416 aaPredicted RBP13.01□□□□□ -0.33
SUPT16H-207ENST00000557394 RGS22Q8NE09 1264 aa13□□□□□ -0.33
SUPT16H-207ENST00000557394 CCDC94Q9BW85 323 aaPredicted RBP13□□□□□ -0.33
SUPT16H-207ENST00000557394 ZSCAN20P17040 1043 aaPredicted RBP13□□□□□ -0.33
SUPT16H-207ENST00000557394 MTMR7Q9Y216 660 aa13□□□□□ -0.33
SUPT16H-207ENST00000557394 SASS6Q6UVJ0 657 aa12.99□□□□□ -0.33
SUPT16H-207ENST00000557394 ZHX1Q9UKY1 873 aaPredicted RBP12.99□□□□□ -0.33
SUPT16H-207ENST00000557394 DEPDC5O75140 1603 aa12.99□□□□□ -0.33
SUPT16H-207ENST00000557394 ZKSCAN5Q9Y2L8 839 aa12.99□□□□□ -0.33
SUPT16H-207ENST00000557394 CLGNO14967 610 aa12.98□□□□□ -0.33
SUPT16H-207ENST00000557394 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
SUPT16H-207ENST00000557394 KCTD17Q8N5Z5 321 aa12.97□□□□□ -0.33
SUPT16H-207ENST00000557394 ZNF830Q96NB3 372 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms