RNA–Protein interactions for RNA: ENST00000557382.1

PPP4R3A-212, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 844 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-212ENST00000557382 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
PPP4R3A-212ENST00000557382 TNNT2P45379 298 aaPredicted RBP11.61□□□□□ -0.55
PPP4R3A-212ENST00000557382 MYH16Q9H6N6 1097 aa11.61□□□□□ -0.55
PPP4R3A-212ENST00000557382 IL16Q14005 1332 aa11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 CPSF1Q10570 1443 aaKnown RBP11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 MON2Q7Z3U7 1717 aa11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 AKAP12Q02952 1782 aa11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 TMEM2Q9UHN6 1383 aa11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 U2AF1L5P0DN76 240 aaPredicted RBP11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 U2AF1Q01081 240 aaKnown RBP eCLIP11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 MLECQ14165 292 aa11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 C20orf194Q5TEA3 1177 aa11.6□□□□□ -0.55
PPP4R3A-212ENST00000557382 MAP2P11137 1827 aaKnown RBP11.59□□□□□ -0.55
PPP4R3A-212ENST00000557382 WASLO00401 505 aaPredicted RBP11.59□□□□□ -0.55
PPP4R3A-212ENST00000557382 ANP32AP39687 249 aaKnown RBP11.59□□□□□ -0.55
PPP4R3A-212ENST00000557382 PLEKHF1Q96S99 279 aa11.59□□□□□ -0.55
PPP4R3A-212ENST00000557382 GGNBP2Q9H3C7 697 aa11.59□□□□□ -0.55
PPP4R3A-212ENST00000557382 CABP1Q9NZU7 370 aa11.59□□□□□ -0.55
PPP4R3A-212ENST00000557382 ITSN1Q15811 1721 aa11.58□□□□□ -0.56
PPP4R3A-212ENST00000557382 METP08581 1390 aa11.57□□□□□ -0.56
PPP4R3A-212ENST00000557382 AATKQ6ZMQ8 1374 aa11.57□□□□□ -0.56
PPP4R3A-212ENST00000557382 PLEKHG1Q9ULL1 1385 aa11.57□□□□□ -0.56
PPP4R3A-212ENST00000557382 DIAPH1O60610 1272 aaKnown RBP11.57□□□□□ -0.56
PPP4R3A-212ENST00000557382 PDE4AP27815 886 aa11.57□□□□□ -0.56
PPP4R3A-212ENST00000557382 ERICH6Q7L0X2 663 aa11.57□□□□□ -0.56
PPP4R3A-212ENST00000557382 BACH2Q9BYV9 841 aa11.57□□□□□ -0.56
PPP4R3A-212ENST00000557382 BCAR3O75815 825 aa11.56□□□□□ -0.56
PPP4R3A-212ENST00000557382 FCHSD2O94868 740 aa11.56□□□□□ -0.56
PPP4R3A-212ENST00000557382 RARSP54136 660 aaKnown RBP11.56□□□□□ -0.56
PPP4R3A-212ENST00000557382 PPIP5K1Q6PFW1 1433 aa11.56□□□□□ -0.56
PPP4R3A-212ENST00000557382 WAPLQ7Z5K2 1190 aa11.56□□□□□ -0.56
PPP4R3A-212ENST00000557382 ZNF692Q9BU19 519 aaPredicted RBP11.56□□□□□ -0.56
PPP4R3A-212ENST00000557382 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
PPP4R3A-212ENST00000557382 C3P01024 1663 aa11.55□□□□□ -0.56
PPP4R3A-212ENST00000557382 ADAMTS13Q76LX8 1427 aa11.55□□□□□ -0.56
PPP4R3A-212ENST00000557382 TMPOP42166 694 aaKnown RBP11.55□□□□□ -0.56
PPP4R3A-212ENST00000557382 IPO9Q96P70 1041 aaKnown RBP11.55□□□□□ -0.56
PPP4R3A-212ENST00000557382 CCDC61Q9Y6R9 512 aa11.55□□□□□ -0.56
PPP4R3A-212ENST00000557382 CDK12Q9NYV4 1490 aaPredicted RBP11.55□□□□□ -0.56
PPP4R3A-212ENST00000557382 SLIT1O75093 1534 aa11.55□□□□□ -0.56
PPP4R3A-212ENST00000557382 RRP7AQ9Y3A4 280 aaKnown RBP11.54□□□□□ -0.56
PPP4R3A-212ENST00000557382 ARHGAP23Q9P227 1491 aa11.54□□□□□ -0.56
PPP4R3A-212ENST00000557382 TOPAZ1Q8N9V7 1692 aa11.54□□□□□ -0.56
PPP4R3A-212ENST00000557382 DIP2AQ14689 1571 aa11.54□□□□□ -0.56
PPP4R3A-212ENST00000557382 NEUROD2Q15784 382 aa11.53□□□□□ -0.56
PPP4R3A-212ENST00000557382 NUDT16Q96DE0 195 aaKnown RBP11.53□□□□□ -0.56
PPP4R3A-212ENST00000557382 U2SURPO15042 1029 aaKnown RBP11.52□□□□□ -0.57
PPP4R3A-212ENST00000557382 NEFMP07197 916 aa11.52□□□□□ -0.57
PPP4R3A-212ENST00000557382 CANXP27824 592 aaKnown RBP11.52□□□□□ -0.57
PPP4R3A-212ENST00000557382 POLKQ9UBT6 870 aa11.52□□□□□ -0.57
PPP4R3A-212ENST00000557382 NOP58Q9Y2X3 529 aaKnown RBP11.52□□□□□ -0.57
PPP4R3A-212ENST00000557382 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
PPP4R3A-212ENST00000557382 CALD1Q05682 793 aaKnown RBP11.51□□□□□ -0.57
PPP4R3A-212ENST00000557382 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
PPP4R3A-212ENST00000557382 PMFBP1Q8TBY8 1022 aa11.51□□□□□ -0.57
PPP4R3A-212ENST00000557382 CLUAP1Q96AJ1 413 aa11.51□□□□□ -0.57
PPP4R3A-212ENST00000557382 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
PPP4R3A-212ENST00000557382 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
PPP4R3A-212ENST00000557382 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
PPP4R3A-212ENST00000557382 LRRC7Q96NW7 1537 aa11.5□□□□□ -0.57
PPP4R3A-212ENST00000557382 NRKQ7Z2Y5 1582 aa11.5□□□□□ -0.57
PPP4R3A-212ENST00000557382 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.5□□□□□ -0.57
PPP4R3A-212ENST00000557382 PLEKHG3A1L390 1219 aa11.5□□□□□ -0.57
PPP4R3A-212ENST00000557382 RSPH6AQ9H0K4 717 aa11.5□□□□□ -0.57
PPP4R3A-212ENST00000557382 EID1Q9Y6B2 187 aa11.5□□□□□ -0.57
PPP4R3A-212ENST00000557382 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
PPP4R3A-212ENST00000557382 RIMS1Q86UR5 1692 aaKnown RBP11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 RIPK4P57078 832 aa11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 ZKSCAN2Q63HK3 967 aa11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 POTEHQ6S545 545 aa11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 COG3Q96JB2 828 aa11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 ROBO2Q9HCK4 1378 aa11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 PTCH1Q13635 1447 aa11.49□□□□□ -0.57
PPP4R3A-212ENST00000557382 BRPF1P55201 1214 aaPredicted RBP11.48□□□□□ -0.57
PPP4R3A-212ENST00000557382 DDRGK1Q96HY6 314 aa11.48□□□□□ -0.57
PPP4R3A-212ENST00000557382 ZBTB47Q9UFB7 747 aaPredicted RBP11.48□□□□□ -0.57
PPP4R3A-212ENST00000557382 NALCNQ8IZF0 1738 aa11.48□□□□□ -0.57
PPP4R3A-212ENST00000557382 IL13P35225 146 aa11.47□□□□□ -0.57
PPP4R3A-212ENST00000557382 LMOD3Q0VAK6 560 aa11.47□□□□□ -0.57
PPP4R3A-212ENST00000557382 NFE2L2Q16236 605 aa11.47□□□□□ -0.57
PPP4R3A-212ENST00000557382 ALDH1L2Q3SY69 923 aa11.47□□□□□ -0.57
PPP4R3A-212ENST00000557382 PANK1Q8TE04 598 aa11.47□□□□□ -0.57
PPP4R3A-212ENST00000557382 COG6Q9Y2V7 657 aa11.47□□□□□ -0.57
PPP4R3A-212ENST00000557382 PRR36Q9H6K5 1346 aa11.46□□□□□ -0.57
PPP4R3A-212ENST00000557382 IPO8O15397 1037 aaKnown RBP11.46□□□□□ -0.57
PPP4R3A-212ENST00000557382 LTKP29376 864 aa11.46□□□□□ -0.57
PPP4R3A-212ENST00000557382 DSG3P32926 999 aa11.46□□□□□ -0.57
PPP4R3A-212ENST00000557382 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.57
PPP4R3A-212ENST00000557382 NME9Q86XW9 330 aa11.46□□□□□ -0.57
PPP4R3A-212ENST00000557382 THEMISQ8N1K5 641 aaPredicted RBP11.46□□□□□ -0.57
PPP4R3A-212ENST00000557382 FRAT1Q92837 279 aaPredicted RBP11.46□□□□□ -0.57
PPP4R3A-212ENST00000557382 DLG5Q8TDM6 1919 aa11.45□□□□□ -0.58
PPP4R3A-212ENST00000557382 PIK3R4Q99570 1358 aa11.45□□□□□ -0.58
PPP4R3A-212ENST00000557382 KIF16BQ96L93 1317 aa11.45□□□□□ -0.58
PPP4R3A-212ENST00000557382 PRKAR2BP31323 418 aa11.45□□□□□ -0.58
PPP4R3A-212ENST00000557382 EXOSC9Q06265 439 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms