RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ANKLE2Q86XL3 938 aa24.11■■□□□ 1.45
SDR39U1-220ENST00000556548 EDC4Q6P2E9 1401 aaKnown RBP24.11■■□□□ 1.45
SDR39U1-220ENST00000556548 KIF20BQ96Q89 1820 aa24.1■■□□□ 1.45
SDR39U1-220ENST00000556548 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
SDR39U1-220ENST00000556548 TCP11L2Q8N4U5 519 aa24.1■■□□□ 1.45
SDR39U1-220ENST00000556548 SLFN5Q08AF3 891 aa24.09■■□□□ 1.45
SDR39U1-220ENST00000556548 CDC42BPGQ6DT37 1551 aa24.08■■□□□ 1.45
SDR39U1-220ENST00000556548 PLIN1O60240 522 aa24.08■■□□□ 1.45
SDR39U1-220ENST00000556548 ACEP12821 1306 aa24.07■■□□□ 1.44
SDR39U1-220ENST00000556548 POLKQ9UBT6 870 aa24.06■■□□□ 1.44
SDR39U1-220ENST00000556548 WWC1Q8IX03 1113 aa24.06■■□□□ 1.44
SDR39U1-220ENST00000556548 PMFBP1Q8TBY8 1022 aa24.06■■□□□ 1.44
SDR39U1-220ENST00000556548 ADGRB2O60241 1585 aa24.05■■□□□ 1.44
SDR39U1-220ENST00000556548 PTCH1Q13635 1447 aa24.05■■□□□ 1.44
SDR39U1-220ENST00000556548 RBM33Q96EV2 1170 aaKnown RBP24.05■■□□□ 1.44
SDR39U1-220ENST00000556548 ZNF692Q9BU19 519 aaPredicted RBP24.05■■□□□ 1.44
SDR39U1-220ENST00000556548 DIP2AQ14689 1571 aa24.04■■□□□ 1.44
SDR39U1-220ENST00000556548 COG3Q96JB2 828 aa24.04■■□□□ 1.44
SDR39U1-220ENST00000556548 DIAPH1O60610 1272 aaKnown RBP24.04■■□□□ 1.44
SDR39U1-220ENST00000556548 EMILIN1Q9Y6C2 1016 aa24.04■■□□□ 1.44
SDR39U1-220ENST00000556548 COL3A1P02461 1466 aaPredicted RBP24.03■■□□□ 1.44
SDR39U1-220ENST00000556548 NKTRP30414 1462 aaKnown RBP24.01■■□□□ 1.43
SDR39U1-220ENST00000556548 PLEKHG3A1L390 1219 aa24.01■■□□□ 1.43
SDR39U1-220ENST00000556548 RRS1Q15050 365 aaKnown RBP24.01■■□□□ 1.43
SDR39U1-220ENST00000556548 TRMT2AQ8IZ69 625 aaKnown RBP24.01■■□□□ 1.43
SDR39U1-220ENST00000556548 E9PSI1 815 aa24■■□□□ 1.43
SDR39U1-220ENST00000556548 EXOC6Q8TAG9 804 aa24■■□□□ 1.43
SDR39U1-220ENST00000556548 NGEFQ8N5V2 710 aa24■■□□□ 1.43
SDR39U1-220ENST00000556548 ITSN1Q15811 1721 aa24■■□□□ 1.43
SDR39U1-220ENST00000556548 MON2Q7Z3U7 1717 aa24■■□□□ 1.43
SDR39U1-220ENST00000556548 IQSEC2Q5JU85 1478 aa24■■□□□ 1.43
SDR39U1-220ENST00000556548 TTC21BQ7Z4L5 1316 aa23.99■■□□□ 1.43
SDR39U1-220ENST00000556548 PNPLA6Q8IY17 1366 aa23.99■■□□□ 1.43
SDR39U1-220ENST00000556548 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
SDR39U1-220ENST00000556548 AKAP12Q02952 1782 aa23.98■■□□□ 1.43
SDR39U1-220ENST00000556548 TSHZ2Q9NRE2 1034 aa23.98■■□□□ 1.43
SDR39U1-220ENST00000556548 ZNF142P52746 1687 aaPredicted RBP23.97■■□□□ 1.43
SDR39U1-220ENST00000556548 PLEKHF1Q96S99 279 aa23.97■■□□□ 1.43
SDR39U1-220ENST00000556548 NGDNQ8NEJ9 315 aaKnown RBP23.96■■□□□ 1.43
SDR39U1-220ENST00000556548 CCDC136Q96JN2 1154 aa23.96■■□□□ 1.43
SDR39U1-220ENST00000556548 TOPAZ1Q8N9V7 1692 aa23.96■■□□□ 1.43
SDR39U1-220ENST00000556548 PIK3R4Q99570 1358 aa23.96■■□□□ 1.43
SDR39U1-220ENST00000556548 SETD1BQ9UPS6 1966 aaKnown RBP23.95■■□□□ 1.42
SDR39U1-220ENST00000556548 SOX12O15370 315 aa23.95■■□□□ 1.42
SDR39U1-220ENST00000556548 MAP2P11137 1827 aaKnown RBP23.95■■□□□ 1.42
SDR39U1-220ENST00000556548 USP6P35125 1406 aa23.94■■□□□ 1.42
SDR39U1-220ENST00000556548 MAPK8IP3Q9UPT6 1336 aa23.94■■□□□ 1.42
SDR39U1-220ENST00000556548 C20orf194Q5TEA3 1177 aa23.93■■□□□ 1.42
SDR39U1-220ENST00000556548 HMOX1P09601 288 aa23.93■■□□□ 1.42
SDR39U1-220ENST00000556548 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
SDR39U1-220ENST00000556548 RGPD8O14715 1765 aaPredicted RBP23.91■■□□□ 1.42
SDR39U1-220ENST00000556548 TMPOP42166 694 aaKnown RBP23.91■■□□□ 1.42
SDR39U1-220ENST00000556548 AATKQ6ZMQ8 1374 aa23.9■■□□□ 1.42
SDR39U1-220ENST00000556548 BCAR3O75815 825 aa23.89■■□□□ 1.42
SDR39U1-220ENST00000556548 CCDC27Q2M243 656 aa23.89■■□□□ 1.42
SDR39U1-220ENST00000556548 WDR63Q8IWG1 891 aa23.89■■□□□ 1.42
SDR39U1-220ENST00000556548 CRBNQ96SW2 442 aa23.89■■□□□ 1.42
SDR39U1-220ENST00000556548 NPHP4O75161 1426 aaPredicted RBP23.89■■□□□ 1.41
SDR39U1-220ENST00000556548 PRKAR2BP31323 418 aa23.89■■□□□ 1.41
SDR39U1-220ENST00000556548 IL13P35225 146 aa23.88■■□□□ 1.41
SDR39U1-220ENST00000556548 NRKQ7Z2Y5 1582 aa23.87■■□□□ 1.41
SDR39U1-220ENST00000556548 FCHSD2O94868 740 aa23.87■■□□□ 1.41
SDR39U1-220ENST00000556548 RIPK4P57078 832 aa23.87■■□□□ 1.41
SDR39U1-220ENST00000556548 RSPH6AQ9H0K4 717 aa23.87■■□□□ 1.41
SDR39U1-220ENST00000556548 CHD2O14647 1828 aaKnown RBP23.86■■□□□ 1.41
SDR39U1-220ENST00000556548 TRIM35Q9UPQ4 493 aa23.86■■□□□ 1.41
SDR39U1-220ENST00000556548 SSH2Q76I76 1423 aa23.85■■□□□ 1.41
SDR39U1-220ENST00000556548 NUTM2GQ5VZR2 741 aa23.85■■□□□ 1.41
SDR39U1-220ENST00000556548 C14orf37Q86TY3 774 aa23.85■■□□□ 1.41
SDR39U1-220ENST00000556548 PNNQ9H307 717 aaKnown RBP23.84■■□□□ 1.41
SDR39U1-220ENST00000556548 CDK12Q9NYV4 1490 aaPredicted RBP23.84■■□□□ 1.41
SDR39U1-220ENST00000556548 OVOS2A0A0J9YW53 1432 aa23.84■■□□□ 1.41
SDR39U1-220ENST00000556548 OVOS2Q6IE36 1432 aa23.84■■□□□ 1.41
SDR39U1-220ENST00000556548 PHACTR3Q96KR7 559 aa23.84■■□□□ 1.41
SDR39U1-220ENST00000556548 LRRC7Q96NW7 1537 aa23.83■■□□□ 1.4
SDR39U1-220ENST00000556548 TSR2Q969E8 191 aaKnown RBP23.82■■□□□ 1.4
SDR39U1-220ENST00000556548 ANKARQ7Z5J8 1434 aa23.82■■□□□ 1.4
SDR39U1-220ENST00000556548 PAK3O75914 559 aaPredicted RBP23.82■■□□□ 1.4
SDR39U1-220ENST00000556548 TTC21AQ8NDW8 1320 aa23.81■■□□□ 1.4
SDR39U1-220ENST00000556548 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.81■■□□□ 1.4
SDR39U1-220ENST00000556548 NEFMP07197 916 aa23.81■■□□□ 1.4
SDR39U1-220ENST00000556548 NALCNQ8IZF0 1738 aa23.81■■□□□ 1.4
SDR39U1-220ENST00000556548 MYH16Q9H6N6 1097 aa23.8■■□□□ 1.4
SDR39U1-220ENST00000556548 NCBP3Q53F19 620 aaKnown RBP23.79■■□□□ 1.4
SDR39U1-220ENST00000556548 HSP90AB2PQ58FF8 381 aa23.79■■□□□ 1.4
SDR39U1-220ENST00000556548 FMN2Q9NZ56 1722 aa23.79■■□□□ 1.4
SDR39U1-220ENST00000556548 NLRP6P59044 892 aa23.79■■□□□ 1.4
SDR39U1-220ENST00000556548 EIF4A2Q14240 407 aaKnown RBP23.78■■□□□ 1.4
SDR39U1-220ENST00000556548 PHF8Q9UPP1 1060 aa23.78■■□□□ 1.4
SDR39U1-220ENST00000556548 ESCO1Q5FWF5 840 aa23.78■■□□□ 1.4
SDR39U1-220ENST00000556548 USP31Q70CQ4 1352 aa23.77■■□□□ 1.4
SDR39U1-220ENST00000556548 BCL2L13Q9BXK5 485 aa23.77■■□□□ 1.4
SDR39U1-220ENST00000556548 FANCIQ9NVI1 1328 aa23.76■■□□□ 1.39
SDR39U1-220ENST00000556548 AEBP1Q8IUX7 1158 aa23.76■■□□□ 1.39
SDR39U1-220ENST00000556548 ABTB2Q8N961 1025 aa23.76■■□□□ 1.39
SDR39U1-220ENST00000556548 MAP3K19Q56UN5 1328 aa23.75■■□□□ 1.39
SDR39U1-220ENST00000556548 FRAT1Q92837 279 aaPredicted RBP23.75■■□□□ 1.39
SDR39U1-220ENST00000556548 CANXP27824 592 aaKnown RBP23.75■■□□□ 1.39
SDR39U1-220ENST00000556548 RARSP54136 660 aaKnown RBP23.75■■□□□ 1.39
SDR39U1-220ENST00000556548 ADGRL3Q9HAR2 1447 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms