RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 CARD14Q9BXL6 1004 aa24.03■■□□□ 1.44
TUBB3-211ENST00000556536 NPHP3Q7Z494 1330 aa24.03■■□□□ 1.44
TUBB3-211ENST00000556536 KTN1Q86UP2 1357 aaKnown RBP24.03■■□□□ 1.44
TUBB3-211ENST00000556536 DDX10Q13206 875 aaKnown RBP24.02■■□□□ 1.44
TUBB3-211ENST00000556536 UPF1Q92900 1129 aaKnown RBP eCLIP24.02■■□□□ 1.44
TUBB3-211ENST00000556536 ZNF692Q9BU19 519 aaPredicted RBP24.02■■□□□ 1.44
TUBB3-211ENST00000556536 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
TUBB3-211ENST00000556536 USP6P35125 1406 aa24.01■■□□□ 1.43
TUBB3-211ENST00000556536 PXDNQ92626 1479 aa24■■□□□ 1.43
TUBB3-211ENST00000556536 SOS2Q07890 1332 aaPredicted RBP23.99■■□□□ 1.43
TUBB3-211ENST00000556536 SSH2Q76I76 1423 aa23.98■■□□□ 1.43
TUBB3-211ENST00000556536 NHSL1Q5SYE7 1610 aa23.98■■□□□ 1.43
TUBB3-211ENST00000556536 NSD3Q9BZ95 1437 aa23.96■■□□□ 1.43
TUBB3-211ENST00000556536 TTC21BQ7Z4L5 1316 aa23.96■■□□□ 1.43
TUBB3-211ENST00000556536 AKAP12Q02952 1782 aa23.96■■□□□ 1.43
TUBB3-211ENST00000556536 EDC4Q6P2E9 1401 aaKnown RBP23.95■■□□□ 1.42
TUBB3-211ENST00000556536 PAK3O75914 559 aaPredicted RBP23.95■■□□□ 1.42
TUBB3-211ENST00000556536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.95■■□□□ 1.42
TUBB3-211ENST00000556536 PER1O15534 1290 aaPredicted RBP23.94■■□□□ 1.42
TUBB3-211ENST00000556536 RXRBP28702 533 aa23.94■■□□□ 1.42
TUBB3-211ENST00000556536 MON2Q7Z3U7 1717 aa23.93■■□□□ 1.42
TUBB3-211ENST00000556536 SBNO1A3KN83 1393 aa23.93■■□□□ 1.42
TUBB3-211ENST00000556536 CDK12Q9NYV4 1490 aaPredicted RBP23.93■■□□□ 1.42
TUBB3-211ENST00000556536 BRD4O60885 1362 aaPredicted RBP23.92■■□□□ 1.42
TUBB3-211ENST00000556536 NRKQ7Z2Y5 1582 aa23.91■■□□□ 1.42
TUBB3-211ENST00000556536 SPATA31A3Q5VYP0 1347 aa23.91■■□□□ 1.42
TUBB3-211ENST00000556536 TRPM3Q9HCF6 1732 aaPredicted RBP23.9■■□□□ 1.42
TUBB3-211ENST00000556536 NME9Q86XW9 330 aa23.9■■□□□ 1.42
TUBB3-211ENST00000556536 TTC21AQ8NDW8 1320 aa23.89■■□□□ 1.42
TUBB3-211ENST00000556536 ZRANB1Q9UGI0 708 aa23.89■■□□□ 1.41
TUBB3-211ENST00000556536 KNSTRNQ9Y448 316 aa23.89■■□□□ 1.41
TUBB3-211ENST00000556536 TNS3Q68CZ2 1445 aa23.89■■□□□ 1.41
TUBB3-211ENST00000556536 NUTM2GQ5VZR2 741 aa23.88■■□□□ 1.41
TUBB3-211ENST00000556536 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
TUBB3-211ENST00000556536 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
TUBB3-211ENST00000556536 NUTM2BA6NNL0 878 aaPredicted RBP23.87■■□□□ 1.41
TUBB3-211ENST00000556536 NUTM2EB1AL46 878 aaPredicted RBP23.87■■□□□ 1.41
TUBB3-211ENST00000556536 FYB1O15117 783 aa23.87■■□□□ 1.41
TUBB3-211ENST00000556536 NUTM2AQ8IVF1 878 aaPredicted RBP23.87■■□□□ 1.41
TUBB3-211ENST00000556536 ABTB2Q8N961 1025 aa23.87■■□□□ 1.41
TUBB3-211ENST00000556536 AMER1Q5JTC6 1135 aaPredicted RBP23.86■■□□□ 1.41
TUBB3-211ENST00000556536 CGNL1Q0VF96 1302 aa23.85■■□□□ 1.41
TUBB3-211ENST00000556536 GGNBP2Q9H3C7 697 aa23.85■■□□□ 1.41
TUBB3-211ENST00000556536 AFF2P51816 1311 aa23.84■■□□□ 1.41
TUBB3-211ENST00000556536 ARHGEF10O15013 1369 aa23.83■■□□□ 1.41
TUBB3-211ENST00000556536 NLRP6P59044 892 aa23.83■■□□□ 1.41
TUBB3-211ENST00000556536 PIK3C2AO00443 1686 aa23.83■■□□□ 1.4
TUBB3-211ENST00000556536 ALS2Q96Q42 1657 aa23.83■■□□□ 1.4
TUBB3-211ENST00000556536 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
TUBB3-211ENST00000556536 PLEKHG5O94827 1062 aa23.82■■□□□ 1.4
TUBB3-211ENST00000556536 PNPLA6Q8IY17 1366 aa23.81■■□□□ 1.4
TUBB3-211ENST00000556536 CNGB1Q14028 1251 aaPredicted RBP23.81■■□□□ 1.4
TUBB3-211ENST00000556536 CC2D1BQ5T0F9 858 aaKnown RBP23.8■■□□□ 1.4
TUBB3-211ENST00000556536 OVOS2A0A0J9YW53 1432 aa23.79■■□□□ 1.4
TUBB3-211ENST00000556536 OVOS2Q6IE36 1432 aa23.79■■□□□ 1.4
TUBB3-211ENST00000556536 NLRP13Q86W25 1043 aa23.79■■□□□ 1.4
TUBB3-211ENST00000556536 CABLES1Q8TDN4 633 aa23.78■■□□□ 1.4
TUBB3-211ENST00000556536 COG3Q96JB2 828 aa23.78■■□□□ 1.4
TUBB3-211ENST00000556536 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
TUBB3-211ENST00000556536 USP19O94966 1318 aa23.77■■□□□ 1.4
TUBB3-211ENST00000556536 NSD2O96028 1365 aa23.77■■□□□ 1.4
TUBB3-211ENST00000556536 RGS12O14924 1447 aa23.76■■□□□ 1.39
TUBB3-211ENST00000556536 RBM6P78332 1123 aaKnown RBP23.75■■□□□ 1.39
TUBB3-211ENST00000556536 C8orf37Q96NL8 207 aa23.75■■□□□ 1.39
TUBB3-211ENST00000556536 SRCAPQ6ZRS2 3230 aa23.74■■□□□ 1.39
TUBB3-211ENST00000556536 QTRT2Q9H974 415 aaKnown RBP23.74■■□□□ 1.39
TUBB3-211ENST00000556536 KIF20BQ96Q89 1820 aa23.74■■□□□ 1.39
TUBB3-211ENST00000556536 MORC1Q86VD1 984 aa23.73■■□□□ 1.39
TUBB3-211ENST00000556536 SOX12O15370 315 aa23.72■■□□□ 1.39
TUBB3-211ENST00000556536 MARF1Q9Y4F3 1742 aaKnown RBP23.72■■□□□ 1.39
TUBB3-211ENST00000556536 USP54Q70EL1 1684 aa23.71■■□□□ 1.39
TUBB3-211ENST00000556536 COL22A1Q8NFW1 1626 aaPredicted RBP23.71■■□□□ 1.39
TUBB3-211ENST00000556536 SLIT3O75094 1523 aa23.71■■□□□ 1.39
TUBB3-211ENST00000556536 GCP02774 474 aa23.71■■□□□ 1.39
TUBB3-211ENST00000556536 FBLN1P23142 703 aa23.71■■□□□ 1.39
TUBB3-211ENST00000556536 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.38
TUBB3-211ENST00000556536 KCNH5Q8NCM2 988 aa23.68■■□□□ 1.38
TUBB3-211ENST00000556536 HAP1P54257 671 aaPredicted RBP23.67■■□□□ 1.38
TUBB3-211ENST00000556536 NGLY1Q96IV0 654 aa23.67■■□□□ 1.38
TUBB3-211ENST00000556536 CRYBG1Q9Y4K1 1723 aa23.67■■□□□ 1.38
TUBB3-211ENST00000556536 PARD3Q8TEW0 1356 aa23.66■■□□□ 1.38
TUBB3-211ENST00000556536 NFAT5O94916 1531 aa23.66■■□□□ 1.38
TUBB3-211ENST00000556536 DIEXFQ68CQ4 756 aaKnown RBP23.66■■□□□ 1.38
TUBB3-211ENST00000556536 PHRF1Q9P1Y6 1649 aaKnown RBP23.66■■□□□ 1.38
TUBB3-211ENST00000556536 ANKRD26Q9UPS8 1709 aa23.65■■□□□ 1.38
TUBB3-211ENST00000556536 ZC3H6P61129 1189 aaKnown RBP23.65■■□□□ 1.38
TUBB3-211ENST00000556536 PRKRIP1Q9H875 184 aaPredicted RBP23.64■■□□□ 1.37
TUBB3-211ENST00000556536 ABCA3Q99758 1704 aa23.64■■□□□ 1.37
TUBB3-211ENST00000556536 RRS1Q15050 365 aaKnown RBP23.63■■□□□ 1.37
TUBB3-211ENST00000556536 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
TUBB3-211ENST00000556536 RALBP1Q15311 655 aa23.62■■□□□ 1.37
TUBB3-211ENST00000556536 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
TUBB3-211ENST00000556536 AATKQ6ZMQ8 1374 aa23.62■■□□□ 1.37
TUBB3-211ENST00000556536 KIAA0232Q92628 1395 aa23.62■■□□□ 1.37
TUBB3-211ENST00000556536 MAP3K19Q56UN5 1328 aa23.61■■□□□ 1.37
TUBB3-211ENST00000556536 ZBTB7CA1YPR0 619 aa23.61■■□□□ 1.37
TUBB3-211ENST00000556536 ANP32CO43423 234 aa23.6■■□□□ 1.37
TUBB3-211ENST00000556536 PPP2R1AP30153 589 aa23.6■■□□□ 1.37
TUBB3-211ENST00000556536 POLKQ9UBT6 870 aa23.6■■□□□ 1.37
TUBB3-211ENST00000556536 EMILIN1Q9Y6C2 1016 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms