RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 EIF4G2P78344 907 aaKnown RBP eCLIP23.92■■□□□ 1.42
PSEN1-217ENST00000556533 ABTB2Q8N961 1025 aa23.92■■□□□ 1.42
PSEN1-217ENST00000556533 SLC12A5Q9H2X9 1139 aa23.92■■□□□ 1.42
PSEN1-217ENST00000556533 POTEAQ6S8J7 498 aa23.91■■□□□ 1.42
PSEN1-217ENST00000556533 HSPA5P11021 654 aaKnown RBP23.9■■□□□ 1.42
PSEN1-217ENST00000556533 ZNF772Q68DY9 489 aaPredicted RBP23.9■■□□□ 1.42
PSEN1-217ENST00000556533 ZNF692Q9BU19 519 aaPredicted RBP23.9■■□□□ 1.42
PSEN1-217ENST00000556533 COL22A1Q8NFW1 1626 aaPredicted RBP23.9■■□□□ 1.42
PSEN1-217ENST00000556533 PUS7Q96PZ0 661 aaKnown RBP23.89■■□□□ 1.41
PSEN1-217ENST00000556533 TRPM3Q9HCF6 1732 aaPredicted RBP23.87■■□□□ 1.41
PSEN1-217ENST00000556533 HDGFL2Q7Z4V5 671 aaPredicted RBP23.87■■□□□ 1.41
PSEN1-217ENST00000556533 USP6P35125 1406 aa23.86■■□□□ 1.41
PSEN1-217ENST00000556533 CDCA8Q53HL2 280 aa23.86■■□□□ 1.41
PSEN1-217ENST00000556533 POLR3GLQ9BT43 218 aa23.86■■□□□ 1.41
PSEN1-217ENST00000556533 USP21Q9UK80 565 aa23.86■■□□□ 1.41
PSEN1-217ENST00000556533 KTN1Q86UP2 1357 aaKnown RBP23.86■■□□□ 1.41
PSEN1-217ENST00000556533 TERF2IPQ9NYB0 399 aa23.85■■□□□ 1.41
PSEN1-217ENST00000556533 NLRP6P59044 892 aa23.84■■□□□ 1.41
PSEN1-217ENST00000556533 TTC21BQ7Z4L5 1316 aa23.84■■□□□ 1.41
PSEN1-217ENST00000556533 NLRP13Q86W25 1043 aa23.83■■□□□ 1.41
PSEN1-217ENST00000556533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.83■■□□□ 1.41
PSEN1-217ENST00000556533 QTRT2Q9H974 415 aaKnown RBP23.83■■□□□ 1.41
PSEN1-217ENST00000556533 BRD4O60885 1362 aaPredicted RBP23.82■■□□□ 1.4
PSEN1-217ENST00000556533 FNBP4Q8N3X1 1017 aaPredicted RBP23.82■■□□□ 1.4
PSEN1-217ENST00000556533 CPSF1Q10570 1443 aaKnown RBP23.82■■□□□ 1.4
PSEN1-217ENST00000556533 ALS2Q96Q42 1657 aa23.81■■□□□ 1.4
PSEN1-217ENST00000556533 FAM83GA6ND36 823 aa23.81■■□□□ 1.4
PSEN1-217ENST00000556533 ZC3H6P61129 1189 aaKnown RBP23.8■■□□□ 1.4
PSEN1-217ENST00000556533 SSH2Q76I76 1423 aa23.78■■□□□ 1.4
PSEN1-217ENST00000556533 PRDM11Q9NQV5 511 aa23.78■■□□□ 1.4
PSEN1-217ENST00000556533 RXRBP28702 533 aa23.77■■□□□ 1.4
PSEN1-217ENST00000556533 TTC21AQ8NDW8 1320 aa23.77■■□□□ 1.4
PSEN1-217ENST00000556533 A0A1W2PP64 1363 aa23.77■■□□□ 1.4
PSEN1-217ENST00000556533 CD163L1Q9NR16 1453 aa23.76■■□□□ 1.39
PSEN1-217ENST00000556533 ZBTB7CA1YPR0 619 aa23.76■■□□□ 1.39
PSEN1-217ENST00000556533 NINLQ9Y2I6 1382 aa23.76■■□□□ 1.39
PSEN1-217ENST00000556533 SOX12O15370 315 aa23.75■■□□□ 1.39
PSEN1-217ENST00000556533 GCP02774 474 aa23.75■■□□□ 1.39
PSEN1-217ENST00000556533 CHRNA2Q15822 529 aa23.75■■□□□ 1.39
PSEN1-217ENST00000556533 NME9Q86XW9 330 aa23.75■■□□□ 1.39
PSEN1-217ENST00000556533 ZRANB1Q9UGI0 708 aa23.75■■□□□ 1.39
PSEN1-217ENST00000556533 TRPC5Q9UL62 973 aaPredicted RBP23.75■■□□□ 1.39
PSEN1-217ENST00000556533 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
PSEN1-217ENST00000556533 USP19O94966 1318 aa23.74■■□□□ 1.39
PSEN1-217ENST00000556533 KIAA0232Q92628 1395 aa23.74■■□□□ 1.39
PSEN1-217ENST00000556533 BTG4Q9NY30 223 aa23.73■■□□□ 1.39
PSEN1-217ENST00000556533 BCL9LQ86UU0 1499 aa23.73■■□□□ 1.39
PSEN1-217ENST00000556533 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
PSEN1-217ENST00000556533 RBM6P78332 1123 aaKnown RBP23.71■■□□□ 1.39
PSEN1-217ENST00000556533 EDC4Q6P2E9 1401 aaKnown RBP23.7■■□□□ 1.38
PSEN1-217ENST00000556533 ANKRD36BQ8N2N9 1353 aa23.69■■□□□ 1.38
PSEN1-217ENST00000556533 C11orf95C9JLR9 678 aaPredicted RBP23.69■■□□□ 1.38
PSEN1-217ENST00000556533 AKAP12Q02952 1782 aa23.69■■□□□ 1.38
PSEN1-217ENST00000556533 ABCA3Q99758 1704 aa23.69■■□□□ 1.38
PSEN1-217ENST00000556533 SLIT2O94813 1529 aa23.69■■□□□ 1.38
PSEN1-217ENST00000556533 MARF1Q9Y4F3 1742 aaKnown RBP23.67■■□□□ 1.38
PSEN1-217ENST00000556533 KCNH5Q8NCM2 988 aa23.67■■□□□ 1.38
PSEN1-217ENST00000556533 ATRNO75882 1429 aa23.67■■□□□ 1.38
PSEN1-217ENST00000556533 GJD4Q96KN9 370 aaPredicted RBP23.66■■□□□ 1.38
PSEN1-217ENST00000556533 STRN4Q9NRL3 753 aa23.66■■□□□ 1.38
PSEN1-217ENST00000556533 PIK3C2AO00443 1686 aa23.66■■□□□ 1.38
PSEN1-217ENST00000556533 EVA1CP58658 441 aa23.65■■□□□ 1.38
PSEN1-217ENST00000556533 PHRF1Q9P1Y6 1649 aaKnown RBP23.64■■□□□ 1.38
PSEN1-217ENST00000556533 VPS72Q15906 364 aa23.64■■□□□ 1.37
PSEN1-217ENST00000556533 CARD14Q9BXL6 1004 aa23.64■■□□□ 1.37
PSEN1-217ENST00000556533 MON2Q7Z3U7 1717 aa23.64■■□□□ 1.37
PSEN1-217ENST00000556533 NRKQ7Z2Y5 1582 aa23.63■■□□□ 1.37
PSEN1-217ENST00000556533 COG3Q96JB2 828 aa23.63■■□□□ 1.37
PSEN1-217ENST00000556533 CRYBG1Q9Y4K1 1723 aa23.63■■□□□ 1.37
PSEN1-217ENST00000556533 CPDO75976 1380 aa23.63■■□□□ 1.37
PSEN1-217ENST00000556533 USP31Q70CQ4 1352 aa23.63■■□□□ 1.37
PSEN1-217ENST00000556533 SOCS7O14512 581 aa23.62■■□□□ 1.37
PSEN1-217ENST00000556533 GGNBP2Q9H3C7 697 aa23.61■■□□□ 1.37
PSEN1-217ENST00000556533 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
PSEN1-217ENST00000556533 SLIT3O75094 1523 aa23.6■■□□□ 1.37
PSEN1-217ENST00000556533 PANK3Q9H999 370 aa23.6■■□□□ 1.37
PSEN1-217ENST00000556533 FYB1O15117 783 aa23.59■■□□□ 1.37
PSEN1-217ENST00000556533 ARHGEF25Q86VW2 580 aa23.59■■□□□ 1.37
PSEN1-217ENST00000556533 PLCH1Q4KWH8 1693 aa23.59■■□□□ 1.37
PSEN1-217ENST00000556533 KIF7Q2M1P5 1343 aa23.59■■□□□ 1.37
PSEN1-217ENST00000556533 NSD3Q9BZ95 1437 aa23.58■■□□□ 1.36
PSEN1-217ENST00000556533 A0A0G2JS52 829 aa23.56■■□□□ 1.36
PSEN1-217ENST00000556533 MYT1Q01538 1121 aa23.56■■□□□ 1.36
PSEN1-217ENST00000556533 USP35Q9P2H5 1018 aa23.56■■□□□ 1.36
PSEN1-217ENST00000556533 AATKQ6ZMQ8 1374 aa23.55■■□□□ 1.36
PSEN1-217ENST00000556533 LARP1Q6PKG0 1096 aaKnown RBP23.55■■□□□ 1.36
PSEN1-217ENST00000556533 AXIN2Q9Y2T1 843 aa23.55■■□□□ 1.36
PSEN1-217ENST00000556533 RGS12O14924 1447 aa23.55■■□□□ 1.36
PSEN1-217ENST00000556533 FBLN1P23142 703 aa23.54■■□□□ 1.36
PSEN1-217ENST00000556533 FAM98CQ17RN3 349 aaKnown RBP23.54■■□□□ 1.36
PSEN1-217ENST00000556533 SPATA31A5Q5VU36 1347 aa23.54■■□□□ 1.36
PSEN1-217ENST00000556533 SPATA31A7Q8IWB4 1347 aa23.54■■□□□ 1.36
PSEN1-217ENST00000556533 CAMTA1Q9Y6Y1 1673 aa23.54■■□□□ 1.36
PSEN1-217ENST00000556533 NWD2Q9ULI1 1742 aa23.53■■□□□ 1.36
PSEN1-217ENST00000556533 OVOS2A0A0J9YW53 1432 aa23.53■■□□□ 1.36
PSEN1-217ENST00000556533 OVOS2Q6IE36 1432 aa23.53■■□□□ 1.36
PSEN1-217ENST00000556533 CDK12Q9NYV4 1490 aaPredicted RBP23.53■■□□□ 1.36
PSEN1-217ENST00000556533 MYOM1P52179 1685 aa23.53■■□□□ 1.36
PSEN1-217ENST00000556533 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.52■■□□□ 1.36
PSEN1-217ENST00000556533 CGNL1Q0VF96 1302 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms