RNA–Protein interactions for RNA: ENST00000556284.1

MTHFD1-213, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 932 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-213ENST00000556284 IQSEC2Q5JU85 1478 aa13.85□□□□□ -0.19
MTHFD1-213ENST00000556284 C1orf167Q5SNV9 1468 aa13.85□□□□□ -0.19
MTHFD1-213ENST00000556284 FMN2Q9NZ56 1722 aa13.84□□□□□ -0.19
MTHFD1-213ENST00000556284 MST1RQ04912 1400 aa13.84□□□□□ -0.19
MTHFD1-213ENST00000556284 PPIP5K1Q6PFW1 1433 aa13.84□□□□□ -0.19
MTHFD1-213ENST00000556284 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
MTHFD1-213ENST00000556284 PHF8Q9UPP1 1060 aa13.84□□□□□ -0.19
MTHFD1-213ENST00000556284 ESCO1Q5FWF5 840 aa13.83□□□□□ -0.2
MTHFD1-213ENST00000556284 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-213ENST00000556284 HDGFL2Q7Z4V5 671 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-213ENST00000556284 IFNLR1Q8IU57 520 aaPredicted RBP13.83□□□□□ -0.2
MTHFD1-213ENST00000556284 PANK3Q9H999 370 aa13.83□□□□□ -0.2
MTHFD1-213ENST00000556284 TOM1O60784 492 aa13.82□□□□□ -0.2
MTHFD1-213ENST00000556284 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
MTHFD1-213ENST00000556284 ANKRD36BQ8N2N9 1353 aa13.82□□□□□ -0.2
MTHFD1-213ENST00000556284 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
MTHFD1-213ENST00000556284 NGDNQ8NEJ9 315 aaKnown RBP13.81□□□□□ -0.2
MTHFD1-213ENST00000556284 PMFBP1Q8TBY8 1022 aa13.81□□□□□ -0.2
MTHFD1-213ENST00000556284 ORAI2Q96SN7 254 aa13.81□□□□□ -0.2
MTHFD1-213ENST00000556284 USP32Q8NFA0 1604 aa13.81□□□□□ -0.2
MTHFD1-213ENST00000556284 ACEP12821 1306 aa13.8□□□□□ -0.2
MTHFD1-213ENST00000556284 POLR3AO14802 1390 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1-213ENST00000556284 CPSF1Q10570 1443 aaKnown RBP13.8□□□□□ -0.2
MTHFD1-213ENST00000556284 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
MTHFD1-213ENST00000556284 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-213ENST00000556284 BRINP3Q76B58 766 aa13.78□□□□□ -0.2
MTHFD1-213ENST00000556284 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
MTHFD1-213ENST00000556284 A0A1W2PP64 1363 aa13.78□□□□□ -0.2
MTHFD1-213ENST00000556284 CD163L1Q9NR16 1453 aa13.78□□□□□ -0.2
MTHFD1-213ENST00000556284 TOPAZ1Q8N9V7 1692 aa13.78□□□□□ -0.2
MTHFD1-213ENST00000556284 FOXO3O43524 673 aa13.77□□□□□ -0.21
MTHFD1-213ENST00000556284 BRD4O60885 1362 aaPredicted RBP13.77□□□□□ -0.21
MTHFD1-213ENST00000556284 PSME1Q06323 249 aa13.77□□□□□ -0.21
MTHFD1-213ENST00000556284 ITSN1Q15811 1721 aa13.77□□□□□ -0.21
MTHFD1-213ENST00000556284 KTN1Q86UP2 1357 aaKnown RBP13.77□□□□□ -0.21
MTHFD1-213ENST00000556284 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
MTHFD1-213ENST00000556284 KNSTRNQ9Y448 316 aa13.77□□□□□ -0.21
MTHFD1-213ENST00000556284 MYOM1P52179 1685 aa13.76□□□□□ -0.21
MTHFD1-213ENST00000556284 NPHP3Q7Z494 1330 aa13.76□□□□□ -0.21
MTHFD1-213ENST00000556284 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
MTHFD1-213ENST00000556284 USP6P35125 1406 aa13.74□□□□□ -0.21
MTHFD1-213ENST00000556284 EDC4Q6P2E9 1401 aaKnown RBP13.74□□□□□ -0.21
MTHFD1-213ENST00000556284 RGPD8O14715 1765 aaPredicted RBP13.74□□□□□ -0.21
MTHFD1-213ENST00000556284 KRT28Q7Z3Y7 464 aa13.74□□□□□ -0.21
MTHFD1-213ENST00000556284 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
MTHFD1-213ENST00000556284 KIF1AQ12756 1690 aa13.73□□□□□ -0.21
MTHFD1-213ENST00000556284 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
MTHFD1-213ENST00000556284 TTC21BQ7Z4L5 1316 aa13.73□□□□□ -0.21
MTHFD1-213ENST00000556284 SSH2Q76I76 1423 aa13.73□□□□□ -0.21
MTHFD1-213ENST00000556284 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
MTHFD1-213ENST00000556284 PIP4K2BP78356 416 aa13.72□□□□□ -0.21
MTHFD1-213ENST00000556284 DIEXFQ68CQ4 756 aaKnown RBP13.72□□□□□ -0.21
MTHFD1-213ENST00000556284 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.21
MTHFD1-213ENST00000556284 SOS2Q07890 1332 aaPredicted RBP13.71□□□□□ -0.21
MTHFD1-213ENST00000556284 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.71□□□□□ -0.21
MTHFD1-213ENST00000556284 ZBTB47Q9UFB7 747 aaPredicted RBP13.71□□□□□ -0.21
MTHFD1-213ENST00000556284 SBNO1A3KN83 1393 aa13.71□□□□□ -0.22
MTHFD1-213ENST00000556284 FYB1O15117 783 aa13.7□□□□□ -0.22
MTHFD1-213ENST00000556284 PAK3O75914 559 aaPredicted RBP13.7□□□□□ -0.22
MTHFD1-213ENST00000556284 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-213ENST00000556284 NSD2O96028 1365 aa13.7□□□□□ -0.22
MTHFD1-213ENST00000556284 AKAP12Q02952 1782 aa13.69□□□□□ -0.22
MTHFD1-213ENST00000556284 XPCQ01831 940 aaPredicted RBP13.69□□□□□ -0.22
MTHFD1-213ENST00000556284 ABTB2Q8N961 1025 aa13.68□□□□□ -0.22
MTHFD1-213ENST00000556284 PXDNQ92626 1479 aa13.67□□□□□ -0.22
MTHFD1-213ENST00000556284 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
MTHFD1-213ENST00000556284 ROBO1Q9Y6N7 1651 aa13.67□□□□□ -0.22
MTHFD1-213ENST00000556284 ANP32CO43423 234 aa13.67□□□□□ -0.22
MTHFD1-213ENST00000556284 NME9Q86XW9 330 aa13.67□□□□□ -0.22
MTHFD1-213ENST00000556284 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
MTHFD1-213ENST00000556284 USP31Q70CQ4 1352 aa13.67□□□□□ -0.22
MTHFD1-213ENST00000556284 SPATA31A3Q5VYP0 1347 aa13.66□□□□□ -0.22
MTHFD1-213ENST00000556284 RALBP1Q15311 655 aa13.66□□□□□ -0.22
MTHFD1-213ENST00000556284 CC2D1BQ5T0F9 858 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-213ENST00000556284 LRRC59Q96AG4 307 aaKnown RBP13.66□□□□□ -0.22
MTHFD1-213ENST00000556284 COG3Q96JB2 828 aa13.66□□□□□ -0.22
MTHFD1-213ENST00000556284 GGNBP2Q9H3C7 697 aa13.66□□□□□ -0.22
MTHFD1-213ENST00000556284 AHDC1Q5TGY3 1603 aaPredicted RBP13.65□□□□□ -0.22
MTHFD1-213ENST00000556284 NLRP6P59044 892 aa13.65□□□□□ -0.22
MTHFD1-213ENST00000556284 MORC1Q86VD1 984 aa13.65□□□□□ -0.22
MTHFD1-213ENST00000556284 NLRP13Q86W25 1043 aa13.65□□□□□ -0.22
MTHFD1-213ENST00000556284 CREBZFQ9NS37 354 aa13.65□□□□□ -0.22
MTHFD1-213ENST00000556284 ARHGEF10O15013 1369 aa13.65□□□□□ -0.22
MTHFD1-213ENST00000556284 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
MTHFD1-213ENST00000556284 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
MTHFD1-213ENST00000556284 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
MTHFD1-213ENST00000556284 PRKRIP1Q9H875 184 aaPredicted RBP13.64□□□□□ -0.23
MTHFD1-213ENST00000556284 NHSL1Q5SYE7 1610 aa13.64□□□□□ -0.23
MTHFD1-213ENST00000556284 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
MTHFD1-213ENST00000556284 ZRANB1Q9UGI0 708 aa13.63□□□□□ -0.23
MTHFD1-213ENST00000556284 PARD3Q8TEW0 1356 aa13.62□□□□□ -0.23
MTHFD1-213ENST00000556284 CHRDL2Q6WN34 429 aa13.62□□□□□ -0.23
MTHFD1-213ENST00000556284 TRPM3Q9HCF6 1732 aaPredicted RBP13.61□□□□□ -0.23
MTHFD1-213ENST00000556284 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
MTHFD1-213ENST00000556284 KCNH5Q8NCM2 988 aa13.61□□□□□ -0.23
MTHFD1-213ENST00000556284 OVOS2A0A0J9YW53 1432 aa13.61□□□□□ -0.23
MTHFD1-213ENST00000556284 OVOS2Q6IE36 1432 aa13.61□□□□□ -0.23
MTHFD1-213ENST00000556284 USP19O94966 1318 aa13.6□□□□□ -0.23
MTHFD1-213ENST00000556284 PIK3C2AO00443 1686 aa13.59□□□□□ -0.23
MTHFD1-213ENST00000556284 AATKQ6ZMQ8 1374 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms