RNA–Protein interactions for RNA: ENST00000556240.1

GPHN-212, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-212ENST00000556240 BMP1P13497 986 aa8.36□□□□□ -1.07
GPHN-212ENST00000556240 CTHP32929 405 aa8.36□□□□□ -1.07
GPHN-212ENST00000556240 CFAP99D6REC4 459 aa8.35□□□□□ -1.07
GPHN-212ENST00000556240 SPTLC1O15269 473 aa8.35□□□□□ -1.07
GPHN-212ENST00000556240 ZBTB3Q9H5J0 574 aa8.35□□□□□ -1.07
GPHN-212ENST00000556240 TERTO14746 1132 aaKnown RBP8.34□□□□□ -1.07
GPHN-212ENST00000556240 VARSP26640 1264 aaKnown RBP8.34□□□□□ -1.07
GPHN-212ENST00000556240 LYPD8Q6UX82 237 aa8.34□□□□□ -1.07
GPHN-212ENST00000556240 RIC3Q7Z5B4 369 aa8.34□□□□□ -1.07
GPHN-212ENST00000556240 HRCP23327 699 aa8.33□□□□□ -1.08
GPHN-212ENST00000556240 CSPP1Q1MSJ5 1256 aa8.33□□□□□ -1.08
GPHN-212ENST00000556240 TRIM46Q7Z4K8 759 aa8.33□□□□□ -1.08
GPHN-212ENST00000556240 CABLES1Q8TDN4 633 aa8.33□□□□□ -1.08
GPHN-212ENST00000556240 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
GPHN-212ENST00000556240 MAP10Q9P2G4 905 aa8.32□□□□□ -1.08
GPHN-212ENST00000556240 NNTQ13423 1086 aa8.31□□□□□ -1.08
GPHN-212ENST00000556240 LCE2CQ5TA81 110 aa8.31□□□□□ -1.08
GPHN-212ENST00000556240 PRPF38BQ5VTL8 546 aaKnown RBP8.31□□□□□ -1.08
GPHN-212ENST00000556240 WIPF1O43516 503 aa8.3□□□□□ -1.08
GPHN-212ENST00000556240 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
GPHN-212ENST00000556240 NEUROD2Q15784 382 aa8.3□□□□□ -1.08
GPHN-212ENST00000556240 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
GPHN-212ENST00000556240 MPNDQ8N594 471 aa8.29□□□□□ -1.08
GPHN-212ENST00000556240 FAM174AQ8TBP5 190 aa8.29□□□□□ -1.08
GPHN-212ENST00000556240 TSC1Q92574 1164 aa8.29□□□□□ -1.08
GPHN-212ENST00000556240 FOXJ1Q92949 421 aa8.29□□□□□ -1.08
GPHN-212ENST00000556240 RSPH6AQ9H0K4 717 aa8.29□□□□□ -1.08
GPHN-212ENST00000556240 MYSM1Q5VVJ2 828 aa8.28□□□□□ -1.08
GPHN-212ENST00000556240 KDM4CQ9H3R0 1056 aa8.28□□□□□ -1.08
GPHN-212ENST00000556240 LIMD1Q9UGP4 676 aa8.28□□□□□ -1.08
GPHN-212ENST00000556240 NUTM2BA6NNL0 878 aaPredicted RBP8.27□□□□□ -1.09
GPHN-212ENST00000556240 NUTM2EB1AL46 878 aaPredicted RBP8.27□□□□□ -1.09
GPHN-212ENST00000556240 PER1O15534 1290 aaPredicted RBP8.27□□□□□ -1.09
GPHN-212ENST00000556240 INSM1Q01101 510 aaPredicted RBP8.27□□□□□ -1.09
GPHN-212ENST00000556240 QPCTQ16769 361 aa8.27□□□□□ -1.09
GPHN-212ENST00000556240 NUTM2DQ5VT03 806 aaPredicted RBP8.27□□□□□ -1.09
GPHN-212ENST00000556240 NUTM2AQ8IVF1 878 aaPredicted RBP8.27□□□□□ -1.09
GPHN-212ENST00000556240 ADH1CP00326 375 aa8.26□□□□□ -1.09
GPHN-212ENST00000556240 TIMP2P16035 220 aa8.26□□□□□ -1.09
GPHN-212ENST00000556240 WDR4P57081 412 aaKnown RBP8.26□□□□□ -1.09
GPHN-212ENST00000556240 ARID5BQ14865 1188 aa8.26□□□□□ -1.09
GPHN-212ENST00000556240 AGERQ15109 404 aa8.26□□□□□ -1.09
GPHN-212ENST00000556240 SLC16A10Q8TF71 515 aa8.26□□□□□ -1.09
GPHN-212ENST00000556240 ZFP42Q96MM3 310 aa8.26□□□□□ -1.09
GPHN-212ENST00000556240 NXF1Q9UBU9 619 aaKnown RBP8.26□□□□□ -1.09
GPHN-212ENST00000556240 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
GPHN-212ENST00000556240 STK17AQ9UEE5 414 aa8.25□□□□□ -1.09
GPHN-212ENST00000556240 ATP1B4Q9UN42 357 aaPredicted RBP8.25□□□□□ -1.09
GPHN-212ENST00000556240 LILRB3O75022 631 aa8.24□□□□□ -1.09
GPHN-212ENST00000556240 PRKCSHP14314 528 aaPredicted RBP8.24□□□□□ -1.09
GPHN-212ENST00000556240 TUSC1Q2TAM9 212 aa8.24□□□□□ -1.09
GPHN-212ENST00000556240 MRPL14Q6P1L8 145 aaKnown RBP8.24□□□□□ -1.09
GPHN-212ENST00000556240 CDK15Q96Q40 435 aa8.24□□□□□ -1.09
GPHN-212ENST00000556240 SCARF1Q14162 830 aa8.23□□□□□ -1.09
GPHN-212ENST00000556240 C4orf48Q5BLP8 95 aa8.23□□□□□ -1.09
GPHN-212ENST00000556240 BPHLQ86WA6 291 aaPredicted RBP8.23□□□□□ -1.09
GPHN-212ENST00000556240 PURBQ96QR8 312 aaKnown RBP8.23□□□□□ -1.09
GPHN-212ENST00000556240 VEGFBP49765 207 aa8.22□□□□□ -1.09
GPHN-212ENST00000556240 HELBQ8NG08 1087 aaPredicted RBP8.22□□□□□ -1.09
GPHN-212ENST00000556240 KLF16Q9BXK1 252 aaPredicted RBP8.22□□□□□ -1.09
GPHN-212ENST00000556240 ZIC2O95409 532 aaPredicted RBP8.21□□□□□ -1.1
GPHN-212ENST00000556240 CLK2P49760 499 aaKnown RBP8.21□□□□□ -1.1
GPHN-212ENST00000556240 RTL5Q5HYW3 569 aaPredicted RBP8.21□□□□□ -1.1
GPHN-212ENST00000556240 NPAS3Q8IXF0 933 aa8.21□□□□□ -1.1
GPHN-212ENST00000556240 ARMC2Q8NEN0 867 aa8.21□□□□□ -1.1
GPHN-212ENST00000556240 ZFAND3Q9H8U3 227 aa8.21□□□□□ -1.1
GPHN-212ENST00000556240 NR3C2P08235 984 aa8.2□□□□□ -1.1
GPHN-212ENST00000556240 GMPRP36959 345 aa8.2□□□□□ -1.1
GPHN-212ENST00000556240 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
GPHN-212ENST00000556240 NR5A1Q13285 461 aa8.2□□□□□ -1.1
GPHN-212ENST00000556240 IRF7Q92985 503 aa8.2□□□□□ -1.1
GPHN-212ENST00000556240 H3BM21 787 aa8.19□□□□□ -1.1
GPHN-212ENST00000556240 NBPF14Q5TI25 921 aa8.19□□□□□ -1.1
GPHN-212ENST00000556240 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
GPHN-212ENST00000556240 POLR3EQ9NVU0 708 aa8.19□□□□□ -1.1
GPHN-212ENST00000556240 SOBPA7XYQ1 873 aa8.18□□□□□ -1.1
GPHN-212ENST00000556240 GRM5P41594 1212 aa8.18□□□□□ -1.1
GPHN-212ENST00000556240 C1QTNF2Q9BXJ5 285 aa8.18□□□□□ -1.1
GPHN-212ENST00000556240 FAM117AQ9C073 453 aa8.18□□□□□ -1.1
GPHN-212ENST00000556240 MAGEB6P1A0A0J9YX57 407 aa8.17□□□□□ -1.1
GPHN-212ENST00000556240 FSHRP23945 695 aa8.17□□□□□ -1.1
GPHN-212ENST00000556240 C6orf118Q5T5N4 469 aa8.17□□□□□ -1.1
GPHN-212ENST00000556240 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
GPHN-212ENST00000556240 ERBB4Q15303 1308 aa8.16□□□□□ -1.1
GPHN-212ENST00000556240 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
GPHN-212ENST00000556240 SH3D19Q5HYK7 790 aa8.16□□□□□ -1.1
GPHN-212ENST00000556240 SH3BP5LQ7L8J4 393 aa8.16□□□□□ -1.1
GPHN-212ENST00000556240 VASH1Q7L8A9 365 aaPredicted RBP8.15□□□□□ -1.1
GPHN-212ENST00000556240 IL27Q8NEV9 243 aa8.15□□□□□ -1.1
GPHN-212ENST00000556240 CARD14Q9BXL6 1004 aa8.15□□□□□ -1.1
GPHN-212ENST00000556240 MAP4K5Q9Y4K4 846 aa8.15□□□□□ -1.1
GPHN-212ENST00000556240 MAN1A2O60476 641 aa8.14□□□□□ -1.11
GPHN-212ENST00000556240 UPP2O95045 317 aa8.14□□□□□ -1.11
GPHN-212ENST00000556240 BMP2P12643 396 aa8.14□□□□□ -1.11
GPHN-212ENST00000556240 TRMT44Q8IYL2 757 aaKnown RBP8.14□□□□□ -1.11
GPHN-212ENST00000556240 PCMTD1Q96MG8 357 aaPredicted RBP8.14□□□□□ -1.11
GPHN-212ENST00000556240 CTDSPL2Q05D32 466 aa8.13□□□□□ -1.11
GPHN-212ENST00000556240 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
GPHN-212ENST00000556240 MEIOBQ8N635 442 aa8.13□□□□□ -1.11
GPHN-212ENST00000556240 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms