RNA–Protein interactions for RNA: ENST00000555780.1

PCNX1-210, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 384 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-210ENST00000555780 SOS2Q07890 1332 aaPredicted RBP9.72□□□□□ -0.85
PCNX1-210ENST00000555780 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.86
PCNX1-210ENST00000555780 ESCO1Q5FWF5 840 aa9.71□□□□□ -0.86
PCNX1-210ENST00000555780 FAM163AQ96GL9 167 aaPredicted RBP9.71□□□□□ -0.86
PCNX1-210ENST00000555780 METRNQ9UJH8 293 aa9.71□□□□□ -0.86
PCNX1-210ENST00000555780 RALGAPBQ86X10 1494 aa9.71□□□□□ -0.86
PCNX1-210ENST00000555780 PXDNQ92626 1479 aa9.71□□□□□ -0.86
PCNX1-210ENST00000555780 LRP6O75581 1613 aa9.71□□□□□ -0.86
PCNX1-210ENST00000555780 PHLPP1O60346 1717 aa9.7□□□□□ -0.86
PCNX1-210ENST00000555780 FOXO3O43524 673 aa9.7□□□□□ -0.86
PCNX1-210ENST00000555780 CDK19Q9BWU1 502 aa9.7□□□□□ -0.86
PCNX1-210ENST00000555780 TULP4Q9NRJ4 1543 aa9.7□□□□□ -0.86
PCNX1-210ENST00000555780 MED1Q15648 1581 aaPredicted RBP9.7□□□□□ -0.86
PCNX1-210ENST00000555780 ROCK2O75116 1388 aaKnown RBP9.69□□□□□ -0.86
PCNX1-210ENST00000555780 ATP7BP35670 1465 aa9.69□□□□□ -0.86
PCNX1-210ENST00000555780 ILDR2Q71H61 639 aa9.69□□□□□ -0.86
PCNX1-210ENST00000555780 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
PCNX1-210ENST00000555780 PMFBP1Q8TBY8 1022 aa9.69□□□□□ -0.86
PCNX1-210ENST00000555780 CLSPNQ9HAW4 1339 aa9.69□□□□□ -0.86
PCNX1-210ENST00000555780 CENPJQ9HC77 1338 aaPredicted RBP9.69□□□□□ -0.86
PCNX1-210ENST00000555780 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
PCNX1-210ENST00000555780 JCADQ9P266 1359 aa9.68□□□□□ -0.86
PCNX1-210ENST00000555780 CCER1Q8TC90 406 aaPredicted RBP9.68□□□□□ -0.86
PCNX1-210ENST00000555780 NUDT16Q96DE0 195 aaKnown RBP9.68□□□□□ -0.86
PCNX1-210ENST00000555780 CABP2Q9NPB3 220 aa9.68□□□□□ -0.86
PCNX1-210ENST00000555780 RGPD8O14715 1765 aaPredicted RBP9.68□□□□□ -0.86
PCNX1-210ENST00000555780 ANKARQ7Z5J8 1434 aa9.67□□□□□ -0.86
PCNX1-210ENST00000555780 POTEJP0CG39 1038 aa9.67□□□□□ -0.86
PCNX1-210ENST00000555780 TESK2Q96S53 571 aa9.67□□□□□ -0.86
PCNX1-210ENST00000555780 CARD11Q9BXL7 1154 aa9.67□□□□□ -0.86
PCNX1-210ENST00000555780 KRT28Q7Z3Y7 464 aa9.66□□□□□ -0.86
PCNX1-210ENST00000555780 DISP3Q9P2K9 1392 aa9.65□□□□□ -0.86
PCNX1-210ENST00000555780 SPATA31A3Q5VYP0 1347 aa9.65□□□□□ -0.86
PCNX1-210ENST00000555780 LCE2DQ5TA82 110 aaPredicted RBP9.65□□□□□ -0.86
PCNX1-210ENST00000555780 MAMSTRQ6ZN01 415 aa9.65□□□□□ -0.86
PCNX1-210ENST00000555780 LRRC59Q96AG4 307 aaKnown RBP9.65□□□□□ -0.86
PCNX1-210ENST00000555780 NPHP3Q7Z494 1330 aa9.64□□□□□ -0.87
PCNX1-210ENST00000555780 PLEKHG3A1L390 1219 aa9.64□□□□□ -0.87
PCNX1-210ENST00000555780 POTEAQ6S8J7 498 aa9.64□□□□□ -0.87
PCNX1-210ENST00000555780 SLC39A7Q92504 469 aa9.64□□□□□ -0.87
PCNX1-210ENST00000555780 TIMELESSQ9UNS1 1208 aa9.64□□□□□ -0.87
PCNX1-210ENST00000555780 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
PCNX1-210ENST00000555780 QRICH2Q9H0J4 1663 aa9.64□□□□□ -0.87
PCNX1-210ENST00000555780 ST20-MTHFSA0A0A6YYL1 179 aa9.63□□□□□ -0.87
PCNX1-210ENST00000555780 NUTM2BA6NNL0 878 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-210ENST00000555780 NUTM2EB1AL46 878 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-210ENST00000555780 C7P10643 843 aa9.63□□□□□ -0.87
PCNX1-210ENST00000555780 NUTM2AQ8IVF1 878 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-210ENST00000555780 TOPAZ1Q8N9V7 1692 aa9.63□□□□□ -0.87
PCNX1-210ENST00000555780 POLR3AO14802 1390 aaPredicted RBP9.63□□□□□ -0.87
PCNX1-210ENST00000555780 ACEP12821 1306 aa9.62□□□□□ -0.87
PCNX1-210ENST00000555780 SPATA31A6Q5VVP1 1343 aa9.62□□□□□ -0.87
PCNX1-210ENST00000555780 CABLES1Q8TDN4 633 aa9.62□□□□□ -0.87
PCNX1-210ENST00000555780 CABP1Q9NZU7 370 aa9.62□□□□□ -0.87
PCNX1-210ENST00000555780 CCDC61Q9Y6R9 512 aa9.62□□□□□ -0.87
PCNX1-210ENST00000555780 SSH2Q76I76 1423 aa9.62□□□□□ -0.87
PCNX1-210ENST00000555780 TRPM3Q9HCF6 1732 aaPredicted RBP9.62□□□□□ -0.87
PCNX1-210ENST00000555780 SBNO1A3KN83 1393 aa9.62□□□□□ -0.87
PCNX1-210ENST00000555780 SBNO2Q9Y2G9 1366 aa9.62□□□□□ -0.87
PCNX1-210ENST00000555780 KIF1AQ12756 1690 aa9.61□□□□□ -0.87
PCNX1-210ENST00000555780 COL22A1Q8NFW1 1626 aaPredicted RBP9.61□□□□□ -0.87
PCNX1-210ENST00000555780 SRPK2P78362 688 aaKnown RBP9.61□□□□□ -0.87
PCNX1-210ENST00000555780 CD163L1Q9NR16 1453 aa9.6□□□□□ -0.87
PCNX1-210ENST00000555780 TNS3Q68CZ2 1445 aa9.6□□□□□ -0.87
PCNX1-210ENST00000555780 PPIP5K1Q6PFW1 1433 aa9.6□□□□□ -0.87
PCNX1-210ENST00000555780 ATMINO43313 823 aaPredicted RBP9.6□□□□□ -0.87
PCNX1-210ENST00000555780 ASTLQ6HA08 431 aaPredicted RBP9.6□□□□□ -0.87
PCNX1-210ENST00000555780 MS4A3Q96HJ5 214 aa9.6□□□□□ -0.87
PCNX1-210ENST00000555780 SCUBE2Q9NQ36 999 aa9.6□□□□□ -0.87
PCNX1-210ENST00000555780 USP47Q96K76 1375 aa9.6□□□□□ -0.87
PCNX1-210ENST00000555780 ADAMTS2O95450 1211 aa9.59□□□□□ -0.87
PCNX1-210ENST00000555780 PSME1Q06323 249 aa9.59□□□□□ -0.87
PCNX1-210ENST00000555780 NGDNQ8NEJ9 315 aaKnown RBP9.59□□□□□ -0.87
PCNX1-210ENST00000555780 EIF3AQ14152 1382 aaKnown RBP9.59□□□□□ -0.87
PCNX1-210ENST00000555780 EVC2Q86UK5 1308 aa9.58□□□□□ -0.88
PCNX1-210ENST00000555780 ALS2Q96Q42 1657 aa9.58□□□□□ -0.88
PCNX1-210ENST00000555780 SLC12A5Q9H2X9 1139 aa9.58□□□□□ -0.88
PCNX1-210ENST00000555780 CPSF1Q10570 1443 aaKnown RBP9.57□□□□□ -0.88
PCNX1-210ENST00000555780 C11orf95C9JLR9 678 aaPredicted RBP9.57□□□□□ -0.88
PCNX1-210ENST00000555780 PLEKHG5O94827 1062 aa9.57□□□□□ -0.88
PCNX1-210ENST00000555780 NUTM2GQ5VZR2 741 aa9.57□□□□□ -0.88
PCNX1-210ENST00000555780 AFF2P51816 1311 aa9.56□□□□□ -0.88
PCNX1-210ENST00000555780 BCL9LQ86UU0 1499 aa9.56□□□□□ -0.88
PCNX1-210ENST00000555780 HSPA5P11021 654 aaKnown RBP9.56□□□□□ -0.88
PCNX1-210ENST00000555780 FNBP4Q8N3X1 1017 aaPredicted RBP9.56□□□□□ -0.88
PCNX1-210ENST00000555780 C8orf37Q96NL8 207 aa9.56□□□□□ -0.88
PCNX1-210ENST00000555780 CRYBG1Q9Y4K1 1723 aa9.56□□□□□ -0.88
PCNX1-210ENST00000555780 USP6P35125 1406 aa9.56□□□□□ -0.88
PCNX1-210ENST00000555780 LMOD2Q6P5Q4 547 aa9.55□□□□□ -0.88
PCNX1-210ENST00000555780 TTC21BQ7Z4L5 1316 aa9.55□□□□□ -0.88
PCNX1-210ENST00000555780 FAM83GA6ND36 823 aa9.54□□□□□ -0.88
PCNX1-210ENST00000555780 PUS7Q96PZ0 661 aaKnown RBP9.54□□□□□ -0.88
PCNX1-210ENST00000555780 SLIT2O94813 1529 aa9.54□□□□□ -0.88
PCNX1-210ENST00000555780 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
PCNX1-210ENST00000555780 ABCA3Q99758 1704 aa9.53□□□□□ -0.88
PCNX1-210ENST00000555780 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
PCNX1-210ENST00000555780 ATAD2Q6PL18 1390 aa9.53□□□□□ -0.88
PCNX1-210ENST00000555780 USP19O94966 1318 aa9.53□□□□□ -0.88
PCNX1-210ENST00000555780 A0A1W2PP64 1363 aa9.52□□□□□ -0.88
PCNX1-210ENST00000555780 MEX3CQ5U5Q3 659 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms