RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 PPIP5K1Q6PFW1 1433 aa13.17□□□□□ -0.3
SIX1-204ENST00000555627 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
SIX1-204ENST00000555627 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
SIX1-204ENST00000555627 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
SIX1-204ENST00000555627 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
SIX1-204ENST00000555627 CDK19Q9BWU1 502 aa13.15□□□□□ -0.3
SIX1-204ENST00000555627 SLC12A5Q9H2X9 1139 aa13.15□□□□□ -0.3
SIX1-204ENST00000555627 AFF2P51816 1311 aa13.13□□□□□ -0.31
SIX1-204ENST00000555627 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
SIX1-204ENST00000555627 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
SIX1-204ENST00000555627 SRPK2P78362 688 aaKnown RBP13.13□□□□□ -0.31
SIX1-204ENST00000555627 EDC4Q6P2E9 1401 aaKnown RBP13.13□□□□□ -0.31
SIX1-204ENST00000555627 NSD2O96028 1365 aa13.12□□□□□ -0.31
SIX1-204ENST00000555627 RBM6P78332 1123 aaKnown RBP13.12□□□□□ -0.31
SIX1-204ENST00000555627 CRYBG1Q9Y4K1 1723 aa13.12□□□□□ -0.31
SIX1-204ENST00000555627 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
SIX1-204ENST00000555627 BRD4O60885 1362 aaPredicted RBP13.11□□□□□ -0.31
SIX1-204ENST00000555627 SSH2Q76I76 1423 aa13.11□□□□□ -0.31
SIX1-204ENST00000555627 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
SIX1-204ENST00000555627 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
SIX1-204ENST00000555627 SENP3-EIF4A1A0A087X0R7 540 aa13.1□□□□□ -0.31
SIX1-204ENST00000555627 RALBP1Q15311 655 aa13.1□□□□□ -0.31
SIX1-204ENST00000555627 USP6P35125 1406 aa13.1□□□□□ -0.31
SIX1-204ENST00000555627 DCCP43146 1447 aa13.1□□□□□ -0.31
SIX1-204ENST00000555627 POLR3AO14802 1390 aaPredicted RBP13.09□□□□□ -0.31
SIX1-204ENST00000555627 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
SIX1-204ENST00000555627 TMC1Q8TDI8 760 aa13.09□□□□□ -0.31
SIX1-204ENST00000555627 PEAK1Q9H792 1746 aa13.09□□□□□ -0.31
SIX1-204ENST00000555627 NHSL1Q5SYE7 1610 aa13.09□□□□□ -0.31
SIX1-204ENST00000555627 OVOS2A0A0J9YW53 1432 aa13.08□□□□□ -0.32
SIX1-204ENST00000555627 OVOS2Q6IE36 1432 aa13.08□□□□□ -0.32
SIX1-204ENST00000555627 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
SIX1-204ENST00000555627 KNSTRNQ9Y448 316 aa13.08□□□□□ -0.32
SIX1-204ENST00000555627 LTN1O94822 1766 aa13.07□□□□□ -0.32
SIX1-204ENST00000555627 MST1RQ04912 1400 aa13.07□□□□□ -0.32
SIX1-204ENST00000555627 SMG6Q86US8 1419 aaKnown RBP13.07□□□□□ -0.32
SIX1-204ENST00000555627 NCOA3Q9Y6Q9 1424 aa13.07□□□□□ -0.32
SIX1-204ENST00000555627 ABCA3Q99758 1704 aa13.06□□□□□ -0.32
SIX1-204ENST00000555627 CNGB1Q14028 1251 aaPredicted RBP13.06□□□□□ -0.32
SIX1-204ENST00000555627 QTRT2Q9H974 415 aaKnown RBP13.06□□□□□ -0.32
SIX1-204ENST00000555627 CABP1Q9NZU7 370 aa13.06□□□□□ -0.32
SIX1-204ENST00000555627 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
SIX1-204ENST00000555627 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
SIX1-204ENST00000555627 CCDC125Q86Z20 511 aa13.05□□□□□ -0.32
SIX1-204ENST00000555627 SLAIN2Q9P270 581 aa13.05□□□□□ -0.32
SIX1-204ENST00000555627 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
SIX1-204ENST00000555627 BLMP54132 1417 aaPredicted RBP13.05□□□□□ -0.32
SIX1-204ENST00000555627 PLEKHG3A1L390 1219 aa13.04□□□□□ -0.32
SIX1-204ENST00000555627 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
SIX1-204ENST00000555627 CCDC61Q9Y6R9 512 aa13.04□□□□□ -0.32
SIX1-204ENST00000555627 RGPD1P0DJD0 1748 aa13.04□□□□□ -0.32
SIX1-204ENST00000555627 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
SIX1-204ENST00000555627 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
SIX1-204ENST00000555627 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
SIX1-204ENST00000555627 HDGFL2Q7Z4V5 671 aaPredicted RBP13.02□□□□□ -0.33
SIX1-204ENST00000555627 NGLY1Q96IV0 654 aa13.02□□□□□ -0.33
SIX1-204ENST00000555627 YTHDC1Q96MU7 727 aaKnown RBP13.02□□□□□ -0.33
SIX1-204ENST00000555627 ACEP12821 1306 aa13.01□□□□□ -0.33
SIX1-204ENST00000555627 MSH6P52701 1360 aa13.01□□□□□ -0.33
SIX1-204ENST00000555627 NFAT5O94916 1531 aa13.01□□□□□ -0.33
SIX1-204ENST00000555627 AHDC1Q5TGY3 1603 aaPredicted RBP13□□□□□ -0.33
SIX1-204ENST00000555627 SLIT3O75094 1523 aa13□□□□□ -0.33
SIX1-204ENST00000555627 INSRP06213 1382 aa13□□□□□ -0.33
SIX1-204ENST00000555627 NUTM2FA1L443 756 aa13□□□□□ -0.33
SIX1-204ENST00000555627 FYB1O15117 783 aa12.99□□□□□ -0.33
SIX1-204ENST00000555627 PROSER2Q86WR7 435 aaPredicted RBP12.99□□□□□ -0.33
SIX1-204ENST00000555627 CEP350Q5VT06 3117 aa12.98□□□□□ -0.33
SIX1-204ENST00000555627 PNISRQ8TF01 805 aaKnown RBP12.98□□□□□ -0.33
SIX1-204ENST00000555627 C8orf37Q96NL8 207 aa12.98□□□□□ -0.33
SIX1-204ENST00000555627 GGNBP2Q9H3C7 697 aa12.98□□□□□ -0.33
SIX1-204ENST00000555627 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
SIX1-204ENST00000555627 PXDNQ92626 1479 aa12.97□□□□□ -0.33
SIX1-204ENST00000555627 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
SIX1-204ENST00000555627 TTC21BQ7Z4L5 1316 aa12.97□□□□□ -0.33
SIX1-204ENST00000555627 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
SIX1-204ENST00000555627 NME9Q86XW9 330 aa12.97□□□□□ -0.33
SIX1-204ENST00000555627 CAMTA1Q9Y6Y1 1673 aa12.96□□□□□ -0.33
SIX1-204ENST00000555627 DLG5Q8TDM6 1919 aa12.96□□□□□ -0.33
SIX1-204ENST00000555627 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.34
SIX1-204ENST00000555627 RGPD5Q99666 1765 aa12.96□□□□□ -0.34
SIX1-204ENST00000555627 AATKQ6ZMQ8 1374 aa12.95□□□□□ -0.34
SIX1-204ENST00000555627 PMFBP1Q8TBY8 1022 aa12.95□□□□□ -0.34
SIX1-204ENST00000555627 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
SIX1-204ENST00000555627 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
SIX1-204ENST00000555627 MORC1Q86VD1 984 aa12.94□□□□□ -0.34
SIX1-204ENST00000555627 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.94□□□□□ -0.34
SIX1-204ENST00000555627 PNPLA6Q8IY17 1366 aa12.94□□□□□ -0.34
SIX1-204ENST00000555627 PHF8Q9UPP1 1060 aa12.93□□□□□ -0.34
SIX1-204ENST00000555627 COL18A1P39060 1754 aa12.93□□□□□ -0.34
SIX1-204ENST00000555627 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
SIX1-204ENST00000555627 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
SIX1-204ENST00000555627 C19orf44Q9H6X5 657 aa12.92□□□□□ -0.34
SIX1-204ENST00000555627 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
SIX1-204ENST00000555627 LMO7Q8WWI1 1683 aa12.9□□□□□ -0.34
SIX1-204ENST00000555627 TNNT2P45379 298 aaPredicted RBP12.9□□□□□ -0.34
SIX1-204ENST00000555627 C1QTNF8P60827 252 aa12.9□□□□□ -0.34
SIX1-204ENST00000555627 C14orf37Q86TY3 774 aa12.9□□□□□ -0.34
SIX1-204ENST00000555627 ORAI2Q96SN7 254 aa12.9□□□□□ -0.34
SIX1-204ENST00000555627 COL22A1Q8NFW1 1626 aaPredicted RBP12.89□□□□□ -0.35
SIX1-204ENST00000555627 FAM208AQ9UK61 1670 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms