RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 MLH3Q9UHC1 1453 aa20.16■□□□□ 0.82
MARK3-209ENST00000555235 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
MARK3-209ENST00000555235 MFAP1P55081 439 aaKnown RBP20.15■□□□□ 0.82
MARK3-209ENST00000555235 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
MARK3-209ENST00000555235 GGT6Q6P531 493 aa20.15■□□□□ 0.82
MARK3-209ENST00000555235 POGZQ7Z3K3 1410 aa20.15■□□□□ 0.82
MARK3-209ENST00000555235 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
MARK3-209ENST00000555235 ABCC3O15438 1527 aa20.15■□□□□ 0.82
MARK3-209ENST00000555235 CD109Q6YHK3 1445 aa20.15■□□□□ 0.82
MARK3-209ENST00000555235 NCOA3Q9Y6Q9 1424 aa20.15■□□□□ 0.82
MARK3-209ENST00000555235 HSP90AA2PQ14568 343 aaPredicted RBP20.15■□□□□ 0.82
MARK3-209ENST00000555235 ARHGEF28Q8N1W1 1705 aaKnown RBP20.14■□□□□ 0.82
MARK3-209ENST00000555235 CT47B1P0C2W7 299 aaPredicted RBP20.14■□□□□ 0.81
MARK3-209ENST00000555235 ZKSCAN2Q63HK3 967 aa20.14■□□□□ 0.81
MARK3-209ENST00000555235 FTSJ3Q8IY81 847 aaKnown RBP20.13■□□□□ 0.81
MARK3-209ENST00000555235 DIP2BQ9P265 1576 aa20.13■□□□□ 0.81
MARK3-209ENST00000555235 ESPNB1AK53 854 aa20.13■□□□□ 0.81
MARK3-209ENST00000555235 HDAC1Q13547 482 aaPredicted RBP20.13■□□□□ 0.81
MARK3-209ENST00000555235 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
MARK3-209ENST00000555235 ZNF692Q9BU19 519 aaPredicted RBP20.12■□□□□ 0.81
MARK3-209ENST00000555235 NEXMIFQ5QGS0 1516 aa20.11■□□□□ 0.81
MARK3-209ENST00000555235 CAMSAP1Q5T5Y3 1602 aa20.11■□□□□ 0.81
MARK3-209ENST00000555235 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
MARK3-209ENST00000555235 PIK3C2BO00750 1634 aa20.1■□□□□ 0.81
MARK3-209ENST00000555235 PTMSP20962 102 aa20.1■□□□□ 0.81
MARK3-209ENST00000555235 PLEKHF1Q96S99 279 aa20.1■□□□□ 0.81
MARK3-209ENST00000555235 CABP2Q9NPB3 220 aa20.1■□□□□ 0.81
MARK3-209ENST00000555235 CFAP74Q9C0B2 1584 aa20.1■□□□□ 0.81
MARK3-209ENST00000555235 CIZ1Q9ULV3 898 aaPredicted RBP20.1■□□□□ 0.81
MARK3-209ENST00000555235 DDIT3P35638 169 aa20.09■□□□□ 0.81
MARK3-209ENST00000555235 SNX21Q969T3 373 aa20.09■□□□□ 0.81
MARK3-209ENST00000555235 TRIM44Q96DX7 344 aaPredicted RBP20.09■□□□□ 0.81
MARK3-209ENST00000555235 ABCC11Q96J66 1382 aa20.09■□□□□ 0.81
MARK3-209ENST00000555235 SIGLEC1Q9BZZ2 1709 aa20.09■□□□□ 0.81
MARK3-209ENST00000555235 TSR2Q969E8 191 aaKnown RBP20.09■□□□□ 0.81
MARK3-209ENST00000555235 PKNOX2Q96KN3 472 aa20.09■□□□□ 0.81
MARK3-209ENST00000555235 COL3A1P02461 1466 aaPredicted RBP20.08■□□□□ 0.8
MARK3-209ENST00000555235 RBM25P49756 843 aaKnown RBP20.07■□□□□ 0.8
MARK3-209ENST00000555235 SKOR2Q2VWA4 1001 aaPredicted RBP20.07■□□□□ 0.8
MARK3-209ENST00000555235 GBP4Q96PP9 640 aa20.07■□□□□ 0.8
MARK3-209ENST00000555235 DDX19BQ9UMR2 479 aa20.07■□□□□ 0.8
MARK3-209ENST00000555235 TMPOP42166 694 aaKnown RBP20.07■□□□□ 0.8
MARK3-209ENST00000555235 EXOSC9Q06265 439 aaKnown RBP20.07■□□□□ 0.8
MARK3-209ENST00000555235 NUTM2DQ5VT03 806 aaPredicted RBP20.07■□□□□ 0.8
MARK3-209ENST00000555235 TRIM35Q9UPQ4 493 aa20.07■□□□□ 0.8
MARK3-209ENST00000555235 A0A1W2PP64 1363 aa20.06■□□□□ 0.8
MARK3-209ENST00000555235 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
MARK3-209ENST00000555235 SMC4Q9NTJ3 1288 aa20.06■□□□□ 0.8
MARK3-209ENST00000555235 TRIM27P14373 513 aa20.05■□□□□ 0.8
MARK3-209ENST00000555235 IL16Q14005 1332 aa20.05■□□□□ 0.8
MARK3-209ENST00000555235 SSH1Q8WYL5 1049 aa20.04■□□□□ 0.8
MARK3-209ENST00000555235 ZFYVE9O95405 1425 aa20.03■□□□□ 0.8
MARK3-209ENST00000555235 TNPO1Q92973 898 aaKnown RBP20.03■□□□□ 0.8
MARK3-209ENST00000555235 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
MARK3-209ENST00000555235 U2SURPO15042 1029 aaKnown RBP20.02■□□□□ 0.8
MARK3-209ENST00000555235 ATF7IPQ6VMQ6 1270 aa20.02■□□□□ 0.8
MARK3-209ENST00000555235 TPM2P07951 284 aa20.02■□□□□ 0.8
MARK3-209ENST00000555235 VSIG10Q8N0Z9 540 aa20.02■□□□□ 0.8
MARK3-209ENST00000555235 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
MARK3-209ENST00000555235 KIF13AQ9H1H9 1805 aa20.02■□□□□ 0.79
MARK3-209ENST00000555235 SAFB2Q14151 953 aaKnown RBP eCLIP20.01■□□□□ 0.79
MARK3-209ENST00000555235 RAB3GAP1Q15042 981 aa20.01■□□□□ 0.79
MARK3-209ENST00000555235 ARHGAP31Q2M1Z3 1444 aa20.01■□□□□ 0.79
MARK3-209ENST00000555235 MED14O60244 1454 aa20.01■□□□□ 0.79
MARK3-209ENST00000555235 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
MARK3-209ENST00000555235 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
MARK3-209ENST00000555235 NOB1Q9ULX3 412 aaKnown RBP20■□□□□ 0.79
MARK3-209ENST00000555235 FYB1O15117 783 aa19.99■□□□□ 0.79
MARK3-209ENST00000555235 SRPK2P78362 688 aaKnown RBP19.99■□□□□ 0.79
MARK3-209ENST00000555235 IDI1Q13907 227 aa19.99■□□□□ 0.79
MARK3-209ENST00000555235 ANKRD26Q9UPS8 1709 aa19.99■□□□□ 0.79
MARK3-209ENST00000555235 TSPOAP1O95153 1857 aa19.98■□□□□ 0.79
MARK3-209ENST00000555235 ATAD2Q6PL18 1390 aa19.98■□□□□ 0.79
MARK3-209ENST00000555235 CD163L1Q9NR16 1453 aa19.98■□□□□ 0.79
MARK3-209ENST00000555235 GAS2L3Q86XJ1 694 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 ZMYND15Q9H091 742 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 STK26Q9P289 416 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 PTPRMP28827 1452 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 RIPK4P57078 832 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 NUCB1Q02818 461 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 CCDC173Q0VFZ6 552 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 TMEM57Q8N5G2 664 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 ZBTB40Q9NUA8 1239 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 TERF2IPQ9NYB0 399 aa19.97■□□□□ 0.79
MARK3-209ENST00000555235 PNPLA6Q8IY17 1366 aa19.96■□□□□ 0.79
MARK3-209ENST00000555235 CLTCQ00610 1675 aaKnown RBP19.95■□□□□ 0.78
MARK3-209ENST00000555235 SLC52A1Q9NWF4 448 aa19.95■□□□□ 0.78
MARK3-209ENST00000555235 DIP2CQ9Y2E4 1556 aa19.95■□□□□ 0.78
MARK3-209ENST00000555235 IBTKQ9P2D0 1353 aaPredicted RBP19.95■□□□□ 0.78
MARK3-209ENST00000555235 KIF16BQ96L93 1317 aa19.94■□□□□ 0.78
MARK3-209ENST00000555235 GOLGA6L22H0YM25 854 aa19.94■□□□□ 0.78
MARK3-209ENST00000555235 DIAPH1O60610 1272 aaKnown RBP19.94■□□□□ 0.78
MARK3-209ENST00000555235 BMP2KLQ5H9B9 411 aa19.94■□□□□ 0.78
MARK3-209ENST00000555235 IPO8O15397 1037 aaKnown RBP19.93■□□□□ 0.78
MARK3-209ENST00000555235 NEO1Q92859 1461 aa19.93■□□□□ 0.78
MARK3-209ENST00000555235 RAPGEF3O95398 923 aa19.93■□□□□ 0.78
MARK3-209ENST00000555235 ALDH1L2Q3SY69 923 aa19.93■□□□□ 0.78
MARK3-209ENST00000555235 ANP32BQ92688 251 aaKnown RBP19.93■□□□□ 0.78
MARK3-209ENST00000555235 PPP1R9BQ96SB3 815 aa19.93■□□□□ 0.78
MARK3-209ENST00000555235 MINK1Q8N4C8 1332 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms