RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 Q3C1V9 767 aa6.29□□□□□ -1.4
KTN1-220ENST00000555172 PTCRAQ6ISU1 281 aaPredicted RBP6.29□□□□□ -1.4
KTN1-220ENST00000555172 KCTD17Q8N5Z5 321 aa6.29□□□□□ -1.4
KTN1-220ENST00000555172 APBB1O00213 710 aa6.29□□□□□ -1.4
KTN1-220ENST00000555172 CAPN5O15484 640 aaPredicted RBP6.29□□□□□ -1.4
KTN1-220ENST00000555172 SIAH2O43255 324 aa6.29□□□□□ -1.4
KTN1-220ENST00000555172 GRIPAP1Q4V328 841 aa6.29□□□□□ -1.4
KTN1-220ENST00000555172 H3BM21 787 aa6.28□□□□□ -1.4
KTN1-220ENST00000555172 DDRGK1Q96HY6 314 aa6.28□□□□□ -1.4
KTN1-220ENST00000555172 SOBPA7XYQ1 873 aa6.27□□□□□ -1.4
KTN1-220ENST00000555172 WNT7BP56706 349 aa6.27□□□□□ -1.4
KTN1-220ENST00000555172 AMHR2Q16671 573 aa6.27□□□□□ -1.4
KTN1-220ENST00000555172 EIF5BO60841 1220 aaKnown RBP6.27□□□□□ -1.41
KTN1-220ENST00000555172 CD46P15529 392 aa6.27□□□□□ -1.41
KTN1-220ENST00000555172 ZFP42Q96MM3 310 aa6.27□□□□□ -1.41
KTN1-220ENST00000555172 KDM4AO75164 1064 aa6.26□□□□□ -1.41
KTN1-220ENST00000555172 FAM117AQ9C073 453 aa6.26□□□□□ -1.41
KTN1-220ENST00000555172 TTLL12Q14166 644 aaPredicted RBP6.26□□□□□ -1.41
KTN1-220ENST00000555172 TMEM151AQ8N4L1 468 aa6.26□□□□□ -1.41
KTN1-220ENST00000555172 EHBP1Q8NDI1 1231 aa6.26□□□□□ -1.41
KTN1-220ENST00000555172 WASF2Q9Y6W5 498 aa6.26□□□□□ -1.41
KTN1-220ENST00000555172 PARP9Q8IXQ6 854 aa6.25□□□□□ -1.41
KTN1-220ENST00000555172 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
KTN1-220ENST00000555172 JUNDP17535 347 aa6.22□□□□□ -1.41
KTN1-220ENST00000555172 SH3BP2P78314 561 aa6.22□□□□□ -1.41
KTN1-220ENST00000555172 TLL2Q9Y6L7 1015 aa6.22□□□□□ -1.41
KTN1-220ENST00000555172 HOXA2O43364 376 aa6.22□□□□□ -1.41
KTN1-220ENST00000555172 NUDT12Q9BQG2 462 aa6.22□□□□□ -1.41
KTN1-220ENST00000555172 PLEKHG3A1L390 1219 aa6.21□□□□□ -1.42
KTN1-220ENST00000555172 MDM2Q00987 491 aaPredicted RBP6.21□□□□□ -1.42
KTN1-220ENST00000555172 LINC01559Q495D7 138 aa6.21□□□□□ -1.42
KTN1-220ENST00000555172 CCDC82Q8N4S0 544 aa6.21□□□□□ -1.42
KTN1-220ENST00000555172 PURBQ96QR8 312 aaKnown RBP6.21□□□□□ -1.42
KTN1-220ENST00000555172 RAD21O60216 631 aa6.2□□□□□ -1.42
KTN1-220ENST00000555172 GSK3AP49840 483 aa6.2□□□□□ -1.42
KTN1-220ENST00000555172 RNF225M0QZC1 329 aaPredicted RBP6.2□□□□□ -1.42
KTN1-220ENST00000555172 GIGYF2Q6Y7W6 1299 aaKnown RBP6.2□□□□□ -1.42
KTN1-220ENST00000555172 GDF11O95390 407 aa6.19□□□□□ -1.42
KTN1-220ENST00000555172 CLCN1P35523 988 aa6.19□□□□□ -1.42
KTN1-220ENST00000555172 XP32Q5T750 250 aa6.19□□□□□ -1.42
KTN1-220ENST00000555172 GOPCQ9HD26 462 aa6.19□□□□□ -1.42
KTN1-220ENST00000555172 IGHA1P01876 353 aa6.18□□□□□ -1.42
KTN1-220ENST00000555172 MRPL14Q6P1L8 145 aaKnown RBP6.18□□□□□ -1.42
KTN1-220ENST00000555172 BAP1Q92560 729 aa6.18□□□□□ -1.42
KTN1-220ENST00000555172 SHROOM4Q9ULL8 1493 aa6.17□□□□□ -1.42
KTN1-220ENST00000555172 NNTQ13423 1086 aa6.17□□□□□ -1.42
KTN1-220ENST00000555172 RGS22Q8NE09 1264 aa6.17□□□□□ -1.42
KTN1-220ENST00000555172 PCMTD1Q96MG8 357 aaPredicted RBP6.17□□□□□ -1.42
KTN1-220ENST00000555172 PCDHGC3Q9UN70 934 aa6.17□□□□□ -1.42
KTN1-220ENST00000555172 MTMR7Q9Y216 660 aa6.17□□□□□ -1.42
KTN1-220ENST00000555172 USP46P62068 366 aa6.17□□□□□ -1.42
KTN1-220ENST00000555172 FLIIQ13045 1269 aa6.17□□□□□ -1.42
KTN1-220ENST00000555172 FOXD4L5Q5VV16 416 aaPredicted RBP6.17□□□□□ -1.42
KTN1-220ENST00000555172 FOXD4L4Q8WXT5 416 aaPredicted RBP6.17□□□□□ -1.42
KTN1-220ENST00000555172 GPCPD1Q9NPB8 672 aa6.17□□□□□ -1.42
KTN1-220ENST00000555172 TIMP2P16035 220 aa6.16□□□□□ -1.42
KTN1-220ENST00000555172 WDR4P57081 412 aaKnown RBP6.16□□□□□ -1.42
KTN1-220ENST00000555172 RASSF7Q02833 373 aa6.16□□□□□ -1.42
KTN1-220ENST00000555172 MS4A1P11836 297 aa6.15□□□□□ -1.42
KTN1-220ENST00000555172 RETREG3Q86VR2 466 aa6.15□□□□□ -1.42
KTN1-220ENST00000555172 UNC93B1Q9H1C4 597 aa6.15□□□□□ -1.42
KTN1-220ENST00000555172 C6orf229H3BNL8 230 aa6.15□□□□□ -1.43
KTN1-220ENST00000555172 SCARF1Q14162 830 aa6.15□□□□□ -1.43
KTN1-220ENST00000555172 C6orf118Q5T5N4 469 aa6.15□□□□□ -1.43
KTN1-220ENST00000555172 AEBP1Q8IUX7 1158 aa6.15□□□□□ -1.43
KTN1-220ENST00000555172 CCNYL3P0C7X3 344 aa6.14□□□□□ -1.43
KTN1-220ENST00000555172 VSIG8P0DPA2 414 aa6.14□□□□□ -1.43
KTN1-220ENST00000555172 RBM25P49756 843 aaKnown RBP6.14□□□□□ -1.43
KTN1-220ENST00000555172 KRTAP4-8Q9BYQ9 185 aa6.14□□□□□ -1.43
KTN1-220ENST00000555172 KLF16Q9BXK1 252 aaPredicted RBP6.13□□□□□ -1.43
KTN1-220ENST00000555172 ZFAND3Q9H8U3 227 aa6.13□□□□□ -1.43
KTN1-220ENST00000555172 SSTR3P32745 418 aaPredicted RBP6.13□□□□□ -1.43
KTN1-220ENST00000555172 ATP1B4Q9UN42 357 aaPredicted RBP6.13□□□□□ -1.43
KTN1-220ENST00000555172 PPFIA3O75145 1194 aa6.12□□□□□ -1.43
KTN1-220ENST00000555172 FDX1P10109 184 aa6.12□□□□□ -1.43
KTN1-220ENST00000555172 CDK11BP21127 795 aaKnown RBP6.12□□□□□ -1.43
KTN1-220ENST00000555172 SH3D19Q5HYK7 790 aa6.12□□□□□ -1.43
KTN1-220ENST00000555172 ZNF511Q8NB15 262 aa6.12□□□□□ -1.43
KTN1-220ENST00000555172 EVA1BQ9NVM1 165 aa6.12□□□□□ -1.43
KTN1-220ENST00000555172 CDK11AQ9UQ88 783 aaPredicted RBP6.12□□□□□ -1.43
KTN1-220ENST00000555172 MAN1A2O60476 641 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 NDUFV2P19404 249 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 KRT76Q01546 638 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 NUTM1Q86Y26 1132 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 GPR161Q8N6U8 529 aaKnown RBP6.11□□□□□ -1.43
KTN1-220ENST00000555172 CLUAP1Q96AJ1 413 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 ADH1CP00326 375 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 FOXK2Q01167 660 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 ARID5BQ14865 1188 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 BEGAINQ9BUH8 593 aa6.11□□□□□ -1.43
KTN1-220ENST00000555172 FAM217BQ9NTX9 383 aaPredicted RBP6.11□□□□□ -1.43
KTN1-220ENST00000555172 VARSP26640 1264 aaKnown RBP6.1□□□□□ -1.43
KTN1-220ENST00000555172 KCNH2Q12809 1159 aa6.1□□□□□ -1.43
KTN1-220ENST00000555172 SKIV2LQ15477 1246 aaKnown RBP6.1□□□□□ -1.43
KTN1-220ENST00000555172 ITPKCQ96DU7 683 aa6.1□□□□□ -1.43
KTN1-220ENST00000555172 ZIC2O95409 532 aaPredicted RBP6.09□□□□□ -1.43
KTN1-220ENST00000555172 NR3C2P08235 984 aa6.09□□□□□ -1.43
KTN1-220ENST00000555172 PTPRNQ16849 979 aa6.09□□□□□ -1.43
KTN1-220ENST00000555172 FOXJ1Q92949 421 aa6.09□□□□□ -1.43
KTN1-220ENST00000555172 CNTNAP3BQ96NU0 1288 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms