RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 NEO1Q92859 1461 aa21.01■□□□□ 0.95
XRCC3-209ENST00000554913 HDAC1Q13547 482 aaPredicted RBP21.01■□□□□ 0.95
XRCC3-209ENST00000554913 PRKCSHP14314 528 aaPredicted RBP21.01■□□□□ 0.95
XRCC3-209ENST00000554913 ATF7IPQ6VMQ6 1270 aa21■□□□□ 0.95
XRCC3-209ENST00000554913 NOB1Q9ULX3 412 aaKnown RBP21■□□□□ 0.95
XRCC3-209ENST00000554913 DDX19BQ9UMR2 479 aa21■□□□□ 0.95
XRCC3-209ENST00000554913 A0A1W2PP64 1363 aa20.99■□□□□ 0.95
XRCC3-209ENST00000554913 ARXQ96QS3 562 aa20.99■□□□□ 0.95
XRCC3-209ENST00000554913 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
XRCC3-209ENST00000554913 MCM4P33991 863 aa20.98■□□□□ 0.95
XRCC3-209ENST00000554913 L1TD1Q5T7N2 865 aaKnown RBP20.98■□□□□ 0.95
XRCC3-209ENST00000554913 STK26Q9P289 416 aa20.98■□□□□ 0.95
XRCC3-209ENST00000554913 TMEM57Q8N5G2 664 aa20.98■□□□□ 0.95
XRCC3-209ENST00000554913 ARHGEF28Q8N1W1 1705 aaKnown RBP20.97■□□□□ 0.95
XRCC3-209ENST00000554913 FAM69CQ0P6D2 419 aa20.97■□□□□ 0.95
XRCC3-209ENST00000554913 SRPK2P78362 688 aaKnown RBP20.97■□□□□ 0.95
XRCC3-209ENST00000554913 SMC5Q8IY18 1101 aa20.97■□□□□ 0.95
XRCC3-209ENST00000554913 ABCC11Q96J66 1382 aa20.96■□□□□ 0.95
XRCC3-209ENST00000554913 RICTORQ6R327 1708 aa20.96■□□□□ 0.95
XRCC3-209ENST00000554913 GZF1Q9H116 711 aaPredicted RBP20.96■□□□□ 0.95
XRCC3-209ENST00000554913 RIPK4P57078 832 aa20.95■□□□□ 0.94
XRCC3-209ENST00000554913 ZBTB40Q9NUA8 1239 aa20.95■□□□□ 0.94
XRCC3-209ENST00000554913 CHMP5Q9NZZ3 219 aa20.95■□□□□ 0.94
XRCC3-209ENST00000554913 ABCC3O15438 1527 aa20.94■□□□□ 0.94
XRCC3-209ENST00000554913 YEATS2Q9ULM3 1422 aa20.94■□□□□ 0.94
XRCC3-209ENST00000554913 COL3A1P02461 1466 aaPredicted RBP20.94■□□□□ 0.94
XRCC3-209ENST00000554913 FYB1O15117 783 aa20.94■□□□□ 0.94
XRCC3-209ENST00000554913 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
XRCC3-209ENST00000554913 CAMSAP1Q5T5Y3 1602 aa20.93■□□□□ 0.94
XRCC3-209ENST00000554913 RRAGDQ9NQL2 400 aaPredicted RBP20.93■□□□□ 0.94
XRCC3-209ENST00000554913 DIP2CQ9Y2E4 1556 aa20.92■□□□□ 0.94
XRCC3-209ENST00000554913 TSPOAP1O95153 1857 aa20.92■□□□□ 0.94
XRCC3-209ENST00000554913 XRCC6P12956 609 aaKnown RBP eCLIP20.92■□□□□ 0.94
XRCC3-209ENST00000554913 NEXMIFQ5QGS0 1516 aa20.92■□□□□ 0.94
XRCC3-209ENST00000554913 IL16Q14005 1332 aa20.92■□□□□ 0.94
XRCC3-209ENST00000554913 DIP2BQ9P265 1576 aa20.91■□□□□ 0.94
XRCC3-209ENST00000554913 SIGLEC1Q9BZZ2 1709 aa20.91■□□□□ 0.94
XRCC3-209ENST00000554913 FSD2A1L4K1 749 aa20.9■□□□□ 0.94
XRCC3-209ENST00000554913 GOLGA6L3A6NEY3 463 aa20.9■□□□□ 0.94
XRCC3-209ENST00000554913 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
XRCC3-209ENST00000554913 MINK1Q8N4C8 1332 aaPredicted RBP20.9■□□□□ 0.94
XRCC3-209ENST00000554913 IDI1Q13907 227 aa20.89■□□□□ 0.94
XRCC3-209ENST00000554913 HSCBQ8IWL3 235 aa20.89■□□□□ 0.93
XRCC3-209ENST00000554913 TRAK2O60296 914 aa20.88■□□□□ 0.93
XRCC3-209ENST00000554913 DIAPH1O60610 1272 aaKnown RBP20.88■□□□□ 0.93
XRCC3-209ENST00000554913 NUCB1Q02818 461 aa20.88■□□□□ 0.93
XRCC3-209ENST00000554913 ZNF692Q9BU19 519 aaPredicted RBP20.88■□□□□ 0.93
XRCC3-209ENST00000554913 IPO8O15397 1037 aaKnown RBP20.88■□□□□ 0.93
XRCC3-209ENST00000554913 PANK2Q9BZ23 570 aa20.88■□□□□ 0.93
XRCC3-209ENST00000554913 KIF16BQ96L93 1317 aa20.88■□□□□ 0.93
XRCC3-209ENST00000554913 TERF2IPQ9NYB0 399 aa20.87■□□□□ 0.93
XRCC3-209ENST00000554913 RSPH6AQ9H0K4 717 aa20.86■□□□□ 0.93
XRCC3-209ENST00000554913 PIK3C2BO00750 1634 aa20.86■□□□□ 0.93
XRCC3-209ENST00000554913 PRAM1Q96QH2 718 aa20.85■□□□□ 0.93
XRCC3-209ENST00000554913 CD163L1Q9NR16 1453 aa20.85■□□□□ 0.93
XRCC3-209ENST00000554913 RBM25P49756 843 aaKnown RBP20.84■□□□□ 0.93
XRCC3-209ENST00000554913 CHD1LQ86WJ1 897 aa20.84■□□□□ 0.93
XRCC3-209ENST00000554913 ATAD2Q6PL18 1390 aa20.84■□□□□ 0.93
XRCC3-209ENST00000554913 FBLN1P23142 703 aa20.83■□□□□ 0.93
XRCC3-209ENST00000554913 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
XRCC3-209ENST00000554913 PNPLA6Q8IY17 1366 aa20.82■□□□□ 0.92
XRCC3-209ENST00000554913 DDIT3P35638 169 aa20.82■□□□□ 0.92
XRCC3-209ENST00000554913 PTPRMP28827 1452 aa20.81■□□□□ 0.92
XRCC3-209ENST00000554913 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
XRCC3-209ENST00000554913 NCOA3Q9Y6Q9 1424 aa20.81■□□□□ 0.92
XRCC3-209ENST00000554913 PNNQ9H307 717 aaKnown RBP20.8■□□□□ 0.92
XRCC3-209ENST00000554913 C1orf115Q9H7X2 142 aa20.8■□□□□ 0.92
XRCC3-209ENST00000554913 MED14O60244 1454 aa20.8■□□□□ 0.92
XRCC3-209ENST00000554913 FCHSD2O94868 740 aa20.8■□□□□ 0.92
XRCC3-209ENST00000554913 SNX21Q969T3 373 aa20.8■□□□□ 0.92
XRCC3-209ENST00000554913 CABP1Q9NZU7 370 aa20.8■□□□□ 0.92
XRCC3-209ENST00000554913 ANKRD45Q5TZF3 282 aa20.79■□□□□ 0.92
XRCC3-209ENST00000554913 HDGFL2Q7Z4V5 671 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-209ENST00000554913 THUMPD2Q9BTF0 503 aaKnown RBP20.79■□□□□ 0.92
XRCC3-209ENST00000554913 ZBTB7BO15156 539 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-209ENST00000554913 ZFYVE9O95405 1425 aa20.79■□□□□ 0.92
XRCC3-209ENST00000554913 DDX11L8A8MPP1 907 aa20.78■□□□□ 0.92
XRCC3-209ENST00000554913 BMP2KLQ5H9B9 411 aa20.78■□□□□ 0.92
XRCC3-209ENST00000554913 CDK19Q9BWU1 502 aa20.78■□□□□ 0.92
XRCC3-209ENST00000554913 PPIP5K1Q6PFW1 1433 aa20.77■□□□□ 0.92
XRCC3-209ENST00000554913 PHACTR3Q96KR7 559 aa20.77■□□□□ 0.92
XRCC3-209ENST00000554913 KIF2CQ99661 725 aa20.77■□□□□ 0.92
XRCC3-209ENST00000554913 ANKRD26Q9UPS8 1709 aa20.77■□□□□ 0.92
XRCC3-209ENST00000554913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.77■□□□□ 0.92
XRCC3-209ENST00000554913 TSPYL6Q8N831 410 aa20.77■□□□□ 0.92
XRCC3-209ENST00000554913 TNPO1Q92973 898 aaKnown RBP20.77■□□□□ 0.92
XRCC3-209ENST00000554913 SLC52A1Q9NWF4 448 aa20.77■□□□□ 0.92
XRCC3-209ENST00000554913 LRRC7Q96NW7 1537 aa20.77■□□□□ 0.91
XRCC3-209ENST00000554913 HMOX1P09601 288 aa20.76■□□□□ 0.91
XRCC3-209ENST00000554913 YTHDC2Q9H6S0 1430 aaKnown RBP20.76■□□□□ 0.91
XRCC3-209ENST00000554913 VAMP4O75379 141 aa20.76■□□□□ 0.91
XRCC3-209ENST00000554913 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
XRCC3-209ENST00000554913 MRE11P49959 708 aa20.75■□□□□ 0.91
XRCC3-209ENST00000554913 BRPF1P55201 1214 aaPredicted RBP20.75■□□□□ 0.91
XRCC3-209ENST00000554913 MRPL50Q8N5N7 158 aaKnown RBP20.75■□□□□ 0.91
XRCC3-209ENST00000554913 POLKQ9UBT6 870 aa20.75■□□□□ 0.91
XRCC3-209ENST00000554913 ELL2O00472 640 aaPredicted RBP20.75■□□□□ 0.91
XRCC3-209ENST00000554913 CD2BP2O95400 341 aaKnown RBP20.75■□□□□ 0.91
XRCC3-209ENST00000554913 ARHGAP31Q2M1Z3 1444 aa20.75■□□□□ 0.91
XRCC3-209ENST00000554913 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms